Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1846 118 7e-22 >seq1846 Length=39165 Score = 118 bits (130), Expect = 7e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 97072 TGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATC 97131 |||||||| || | | || ||||| || |||||||| | ||| ||||| |||| | Sbjct 5976 TGAGCATCCCCAATAACATGGATAAAATCGCCAGGAACAAGATCGCACACATGAGCGAGC 5917 Query 97132 ATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCT 97191 || ||||| | ||||| ||| |||||||||||| ||||| || || ||||| |||||| Sbjct 5916 ATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAGGCCCATGTCAGCT 5857 Query 97192 GATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 || | |||||| | ||||| || |||| ||| || |||||| ||||| Sbjct 5856 GAACGTTGATACATTTGACATGAGAGCTCTCCTTCTGCCACATAGAACTG 5807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346755395521760