Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq252 113 5e-20 seq49 113 5e-20 seq65 109 6e-19 seq442 107 2e-18 seq187 93.3 5e-14 >seq252 Length=291119 Score = 113 bits (124), Expect = 5e-20 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || |||||| ||||| |||||||| |||| || || | Sbjct 178872 ACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGTGCGACC 178931 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| ||||| ||||||||||| | || | || ||||| Sbjct 178932 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTT 178991 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 |||| ||| || ||||| | | | ||||| |||| || || || | || Sbjct 178992 GTCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTC---TCGACTTCAAGGGT 179048 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || ||||| |||| ||||| || || || ||||| Sbjct 179049 GATCGTCTTGCCGGTTAAAGTCTTCACGAAAATCTGCAT 179087 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || |||||||||||| |||||||| |||| || || | Sbjct 179100 ACGCAACACCAAGTGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCCAATGTGCGACC 179159 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| || ||||| ||||| |||||||| || | || | || ||||| Sbjct 179160 ATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTT 179219 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 43144 ||| || || |||| | | | ||||| |||| ||||| |||| || Sbjct 179220 ATCCTGTATCTTGGCCTTGACATTATCGATTGTGTCAGAGCTC---TCCACCTCGAGTGT 179276 Query 43145 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || ||||| || || ||||| |||||||| ||||| Sbjct 179277 AATCGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 179315 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| ||||||| || || | || || ||||| || |||||||| Sbjct 178668 CTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAA 178727 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||| ||| || || | ||| Sbjct 178728 GATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATCTTCGCCTTCA-CGT 178786 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| || || |||| |||| Sbjct 178787 TGTCAATGGTGTCCGAGCTC---TCAACCTCCAGTGTGATGGTCTTACCGGTTAAGGTCT 178843 Query 43168 TTACAAAGATTTGCAT 43183 | ||||| || ||||| Sbjct 178844 TCACAAAAATCTGCAT 178859 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||| | || |||||| || |||||||||||||||| || | |||| || Sbjct 179562 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCAGCCAATGTTCTGCCGTCCTC 179621 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | | |||||| || | || | || ||||||||| | Sbjct 179622 AAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCC-T 179680 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 | | || | | | ||| | | | ||||| |||| || || || | ||||||| Sbjct 179681 GGATCTTGGCCTTAACGTTGTCAATTGTGTCCGAGCTC---TCAACCTCCAAGGTGATGG 179737 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||| | ||| || || || || ||||| Sbjct 179738 TCTTGCCCGTCAACGTTTTAACGAAAATCTGCAT 179771 >seq49 Length=794425 Score = 113 bits (124), Expect = 5e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||| | |||||||||||| || || || || || |||||||| || Sbjct 170240 CCACCTCTCAGACGGAGCACCAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCTGCA 170299 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || |||||||| || |||||||||||||||| ||||||||| | || Sbjct 170300 AGCGTTCGACCATCCTCTAGCTGTTTGCCAGCGAATATGAGTCTCTGCTGGTCCGGAGGG 170359 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||| | ||| | |||| |||| | | | ||||| ||| ||| Sbjct 170360 ATCCCTTCCTTGT-CTTGAATCTTTGCCTTGACATTGTCAATAGTGTCCGAGCT---TTC 170415 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | || ||||||||||| || || ||||| || ||||| ||||| Sbjct 170416 AACTTCCAATGTTATGGTTTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 170466 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | ||||| |||| || ||| || || |||||||||||||| Sbjct 170468 CCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGACTCTTTCTGGATATTGTAATCAGCG 170527 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || ||||| || || ||||| ||||||| ||| ||||| | || Sbjct 170528 AGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 170587 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 43132 | | ||||||| | ||| | || | || | | | | | | ||||| |||| || Sbjct 170588 ATCCCTTCCTTGT-CTTGAATCTTAGCTTTAACATTGTCGATTGTGTCTGAGCTC---TC 170643 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||||||||| || || || || || ||||| ||||| Sbjct 170644 AACTTCTAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 170694 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| || | | ||||| |||| || || || || ||||||||||| || Sbjct 170696 CCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGATTCTTTCTGGATATTGTAATCTGCA 170755 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || | || || |||||||| || ||||| || || | ||||||||| | || Sbjct 170756 AGAGTTCGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGCCTCTGCTGGTCCGGAGGA 170815 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||||||||| ||| | |||| |||| | | | ||||| |||| || Sbjct 170816 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACATTGTCGATAGTGTCCGAGCTC---TC 170871 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | |||||||||||||| || || || || |||||||| ||||| Sbjct 170872 AACTTCTAGGGTGATGGTTTTGCCTGTAAGGGTTTTAACAAAGATCTGCAT 170922 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| ||||| |||||||||||||||||||| || | || || ||||| ||||| || || Sbjct 171187 CTCTTTTTGGATATTGTAATCAGCCAGAGTTCGGCCATCCTCGAGCTGTTTACCGGCAAA 171246 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| | ||||||||||| || | | || || ||| ||| || |||| ||| Sbjct 171247 GATGAGCCTCTGCTGGTCGGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCTTGA-CGT 171305 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| ||| ||| || |||| || || || ||||| || || |||| Sbjct 171306 TGTCGATGGTGTCCGAGCT---TTCTACCTCGAGGGTTATCGTCTTGCCTGTAAGAGTCT 171362 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 171363 TAACAAAGATCTGCAT 171378 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||| | || | || |||||| || || ||||||||||| ||||| || | Sbjct 170023 ACGCAACACAAGGTGAAGCGTTGACTCCTTCTGTATGTTGTAATCAGCAAGAGTGCGACC 170082 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||| || || ||||| ||||||| ||| || || | || | | ||||| Sbjct 170083 ATCCTCTAGCTGTTTGCCGGCGAAGATGAGTCTCTGTTGATCCGGAGGGATTCCTTCCTT 170142 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 || | ||| | || | || | | | | | | ||||| |||| ||||| || | | Sbjct 170143 GT-CTTGAATCTTCGCTTTAACATTGTCGATTGTGTCTGAGCTC---TCCACTTCCAATG 170198 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||| || || || ||||| ||||| || ||||| Sbjct 170199 TTATGGTTTTACCGGTAAGGGTCTTGACAAATATCTGCAT 170238 >seq65 Length=625306 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| ||||| ||||| || |||| || |||||||| || ||||| Sbjct 275771 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 275712 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | | ||| || ||| ||| |||| | |||| Sbjct 275711 GATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCC-TGAATTTTGGCCTTGACGT 275653 Query 43111 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| ||||| |||| ||||| || || |||||||| || | Sbjct 275652 TATCGATTGTGTCAGAGCTC---TCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTT 275596 Query 43168 TTACAAAGATTTGCAT 43183 | || || |||||||| Sbjct 275595 TGACGAATATTTGCAT 275580 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | ||||| || | ||| |||||| ||||| |||||||| ||| Sbjct 276262 CCTCCACGAAGACGGAGAACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGCC 276203 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || || | || || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 276202 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 276143 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 43132 | | ||| || ||| ||| | || | || | | | | ||||| |||| || Sbjct 276142 ATTCCCTCTTTATCC-TGAATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTC---TC 276087 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| |||| || || || ||||| || || ||||| || ||||||||||| Sbjct 276086 CACCTCGAGGGTAATCGTCTTGCCAGTGAGTGTCTTCACGAAGATTTGCAT 276036 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | ||| |||||| || || ||||| ||||||| || | | Sbjct 276023 ACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAATGTTCTGCC 275964 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || || | |||||| || | || | || || || Sbjct 275963 GTCTTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCTTT 275904 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || || | ||| | | | ||||| |||| ||||| || | | Sbjct 275903 GTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCCGAGCTC---TCCACCTCCAGGG 275848 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| |||||||| | || || || ||||| ||||| Sbjct 275847 TAATGGTCTTGCCCGTCAAGGTTTTAACGAAGATCTGCAT 275808 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || ||||| || || ||||| Sbjct 412953 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTGTTTCCCCGCGAA 413012 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | |||||||||||| | ||| | | |||||||| ||| || ||||| | Sbjct 413013 AATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATT 413072 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||||| || || | || ||||| || ||||| || || || || Sbjct 413073 GTCGATGGTGTCAGAGGATTCGACCTCAAGGGTTATGGTCTTCCCCGTAAGGGTTTTCAC 413132 Query 43172 AAAGATTTGCATTTTTACG 43190 ||||| ||||| ||| || Sbjct 413133 GAAGATCTGCATCTTTGCG 413151 >seq442 Length=166222 Score = 107 bits (118), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | || |||||| ||||| |||||||| |||| || || | Sbjct 81773 ACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGTGCGACC 81714 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| ||||| ||||||||||| | || | | ||||| Sbjct 81713 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTT 81654 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| ||| || || | ||| | | | ||||| |||| || || || | | Sbjct 81653 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCAGAGCTC---TCGACCTCCAAGG 81598 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || ||||| || || ||||| || || |||||||| Sbjct 81597 TGATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 Score = 102 bits (112), Expect = 9e-17 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||| || | ||| |||||| || || ||||| ||||||| ||| || | Sbjct 81317 ACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTTCGGCC 81258 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || ||||| || | || |||||| || | || | | ||||| Sbjct 81257 GTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTT 81198 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCG 43143 |||| |||||| || | ||| | || |||||| ||| ||||| || | | Sbjct 81197 GTCCTGGATTTTAGCCTTCA-CGTTGTCAATAGTGTCGGAGCTC---TCCACTTCCAAAG 81142 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || | |||||| || ||||||||||| Sbjct 81141 TGATGGTCTTTCCGGTCAACGTCTTGACGAAGATTTGCAT 81102 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || ||||||||||| |||| || || | || || |||||||| || ||||| Sbjct 81521 CTCTTTCTGGATATTGTAATCGGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 81462 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | | |||||||||| |||||| || | ||| Sbjct 81461 GATCAACCTCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCA-CGT 81403 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || | |||||||| || ||||| | ||||| | Sbjct 81402 TGTCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTTCCCGTCAAGGTCTTGA 81343 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 81342 CGAAGATCTGCAT 81330 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| || || | || || |||||||| |||||||| Sbjct 81977 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 81918 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | ||||||||| ||| || || | ||| Sbjct 81917 AATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 81859 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | ||||| || ||||| || || || | Sbjct 81858 TGTCAATAGTGTCAGAGCTC---TCGACTTCAAGGGTGATTGTCTTGCCGGTAAGGGTTT 81802 Query 43168 TTACAAAGATTTGCAT 43183 | || || || ||||| Sbjct 81801 TCACGAATATCTGCAT 81786 >seq187 Length=227058 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 169714 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAA 169773 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | |||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 169774 AATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTGACATT 169833 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | ||||| || || ||||| || || || || Sbjct 169834 GTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATTGTCTTCCCCGTCAGGGTTTTCAC 169893 Query 43172 AAAGATTTGCATTTTT 43187 ||||| ||||||||| Sbjct 169894 GAAGATCTGCATTTTT 169909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571769224231040