Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq442 116 3e-21 seq65 116 3e-21 seq187 113 4e-20 seq252 111 1e-19 seq69 102 6e-17 seq49 100 2e-16 seq986 84.2 2e-11 >seq442 Length=166222 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||||||||||||||| ||| || | |||| | || Sbjct 81769 AACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGTGCGACCATCC 81710 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||| ||||| || | ||||| ||||| ||||| | ||| ||||||||| Sbjct 81709 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTTGTCC 81650 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | |||| | ||| ||||||| ||| || ||| Sbjct 81649 TGGATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAAGGTGATTGTC 81590 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || || |||||||| || |||||||| Sbjct 81589 TTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 Score = 111 bits (122), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGT 45182 || |||||||| || || ||||||||| ||||||||||| || ||| || ||| Sbjct 81313 AAGACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTT--CGGCCGT 81256 Query 45183 CGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGT 45242 | || ||||| ||||||||||| ||||| | ||| || || ||||| | ||| ||||||| Sbjct 81255 CTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTTGT 81196 Query 45243 CCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302 || ||||| ||| || | | |||| | |||||| |||| || || | Sbjct 81195 CCTGGATTTTAGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCCACTTCCAAAGTGATGG 81136 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || |||| ||||| || ||||||||||| Sbjct 81135 TCTTTCCGGTCAACGTCTTGACGAAGATTTGCAT 81102 Score = 109 bits (120), Expect = 4e-19 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGTCGT 45185 |||||||| || || ||||||||| |||||||||||| || ||| || |||| | Sbjct 80854 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTT--CGGCCGTCTT 80797 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 ||| || ||||||||||| || | || ||| || || ||||| | || ||||| ||| Sbjct 80796 CCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTATCCT 80737 Query 45246 CAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 | |||| |||| | || | | | | |||| | |||||||| | ||| || ||| Sbjct 80736 GGA-TTTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTC 80678 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || ||||||||||| || ||||| ||||| Sbjct 80677 TTCCCGGTCAGAGTCTTAACGAAGATCTGCAT 80646 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| ||||| ||| ||||| || ||||| ||| || |||| | || || Sbjct 81538 ACCAAGTGAAGCGTTGACTCTTTCTGGATATTGTAATCGGCCAAGGTGCGACCATCCTCG 81479 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||||| ||| ||||| ||||| | |||||||||||| Sbjct 81478 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGG 81419 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | |||| | || ||||||| || || ||||| Sbjct 81418 ATTTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTT 81359 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| ||||| || ||||| ||||| Sbjct 81358 CCCGTCAAGGTCTTGACGAAGATCTGCAT 81330 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || || |||| || ||||| ||||||||||| Sbjct 81065 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCGGCCGTCCTCGAGTTGCTTTCCGGCGAA 81006 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| ||||| ||||| | ||| |||||||| || || ||| || Sbjct 81005 GATCAACCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 80946 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||||||||| | ||| |||||||| || || || || || || Sbjct 80945 GTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATCGTCTTTCCTGTTAGGGTTTTGAC 80886 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 80885 GAAGATCTGCAT 80874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| ||||||||||| || | |||| | || || Sbjct 81994 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCA 81935 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | ||||| ||||| ||||| | ||| ||||||||| Sbjct 81934 AGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGG 81875 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||| || || | ||| || |||||| Sbjct 81874 ATCTTCGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCGACTTCAAGGGTGATTGTCTTG 81815 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || || ||||| || || |||||| Sbjct 81814 CCGGTAAGGGTTTTCACGAATATCTGCATG 81785 >seq65 Length=625306 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||||||||||||| || || |||| | || || Sbjct 276244 ACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGCCAAGGTGCGACCATCCTCG 276185 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| || | ||||| ||||| ||||| | ||||| || ||| | Sbjct 276184 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCCTGA 276125 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||||||||| | ||||||||||||| Sbjct 276124 ATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTCTCCACCTCGAGGGTAATCGTCTTG 276065 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || |||||||| ||||||||||| Sbjct 276064 CCAGTGAGTGTCTTCACGAAGATTTGCAT 276036 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || ||||||||| ||||||||||| || | | |||| Sbjct 276019 AACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAATGTTCTGCCGTCT 275960 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||||||||| |||| || ||| || || ||||| | || || |||||| Sbjct 275959 TCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCTTTGTCC 275900 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | ||||| | ||||||||||| |||||| ||| Sbjct 275899 TGGATCTTGGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCCACCTCCAGGGTAATGGTC 275840 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||||| || || || ||||| ||||| Sbjct 275839 TTGCCCGTCAAGGTTTTAACGAAGATCTGCAT 275808 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||||||||||||||| || || |||| || || || ||||||||||| Sbjct 275771 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 275712 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| ||||| | ||||| || ||| |||||| ||| || Sbjct 275711 GATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCCTGAATTTTGGCCTTGACGTT 275652 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||||||||| | ||| |||||||| ||||| || || || || Sbjct 275651 ATCGATTGTGTCAGAGCTCTCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTTGAC 275592 Query 45325 AAAGATTTGCAT 45336 || |||||||| Sbjct 275591 GAATATTTGCAT 275580 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||||||| |||||||||||| || | |||| | || || Sbjct 276472 ACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAATGTGCGACCATCCTCA 276413 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | ||||| ||||| ||||| | || |||||||| Sbjct 276412 AGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGG 276353 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | ||||| | ||| ||||||| || || ||||| Sbjct 276352 ATCTTTGCCTTCACGTTATCAATCGTGTCCGAGCTCTCAACCTCCAGAGTGATGGTCTTA 276293 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||||| || || ||||| Sbjct 276292 CCGGTCAATGTCTTCACGAAAATCTGCAT 276264 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||| ||| || | | |||| ||| Sbjct 275560 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCCAATGTTCTGCCGTCTTCC 275501 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || ||||||||||| || | || ||| || || || || | |||||||| ||| Sbjct 275500 AACTGCTTTCCGGCGAAGATTAGCCTCTGCTGATCCGGTGGGATTCCCTCCTTATCCTGG 275441 Query 45248 ATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 | | || |||| | || | | | |||| | |||||||| | ||| ||||| || Sbjct 275440 A-TCTTGGCTTTAACGTTGTCGATCGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTTTT 275382 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| || ||||| ||||| Sbjct 275381 CCCGGTGAGAGTCTTAACGAAGATCTGCAT 275352 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || ||| |||| ||||| ||| Sbjct 412942 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTGT 413001 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || ||||| ||||| ||||| ||||| || || | || |||||||| || || Sbjct 413002 TTCCCCGCGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCTTGGATCTTC 413061 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 || || | | | |||| || ||||| | ||| || ||||| ||||| Sbjct 413062 GCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCAAGGGTTATGGTCTTCCCCGTA 413121 Query 45314 AGAGTCTTCACAAAGATTTGCATGTT 45339 || || ||||| ||||| ||||| || Sbjct 413122 AGGGTTTTCACGAAGATCTGCATCTT 413147 >seq187 Length=227058 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| ||||| ||||||||| |||||||||||| || ||| |||| || Sbjct 169697 ACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCG 169756 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| ||||| ||||| ||||| | || ||||||||| Sbjct 169757 AGCTGCTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGG 169816 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||| ||||| | ||| || ||||| Sbjct 169817 ATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATTGTCTTC 169876 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 |||||||| || ||||| ||||| ||||| || Sbjct 169877 CCCGTCAGGGTTTTCACGAAGATCTGCATTTT 169908 >seq252 Length=291119 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||||||||||||||||||| || | | |||| Sbjct 179332 AACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCCAATGTTCTGCCGTCC 179391 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||||||||| ||||||| || || || ||||| | || |||||||| Sbjct 179392 TCAAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGAATGCCTTCCTTGTCT 179451 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 || ||| ||| | || | || | ||||| | ||||||||||| || ||||| Sbjct 179452 TGGATCTTTGCCTTCA-CGTTGTCAATCGTGTCCGAGCTCTCCACCTCCAATGTGATCGT 179510 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| |||| || || || || || ||||| Sbjct 179511 CTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 179543 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || || |||||||||||||||||| ||| || | |||| | || Sbjct 178876 AACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGTGCGACCATCC 178935 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || ||||| ||||| || | ||||| ||||| ||||| | || ||||||||| Sbjct 178936 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 178995 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || || || | | | |||| | ||| || || | ||| |||||| Sbjct 178996 TGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCAAGGGTGATCGTC 179055 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || | ||||||||| || || ||||| Sbjct 179056 TTGCCGGTTAAAGTCTTCACGAAAATCTGCAT 179087 Score = 98.7 bits (108), Expect = 8e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || || |||| || ||||| || |||||||| Sbjct 179808 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGTTGCTTCCCGGCGAA 179867 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| || || ||||| || || | ||||||||||| ||||| ||| || Sbjct 179868 GATCAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGGATTTTAGCCTTGACGTT 179927 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| || ||||||||| | ||| |||||||| ||||| || || || || Sbjct 179928 GTCGATGGTGTCAGAACTCTCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTTGAC 179987 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 179988 GAAGATCTGCAT 179999 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||| || ||||||||||| || | |||| | || || Sbjct 178651 ACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCA 178710 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || ||||| || | ||||| ||||| ||||| | || |||||||| Sbjct 178711 AGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGG 178770 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | ||| ||||||| || || ||||| Sbjct 178771 ATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCAACCTCCAGTGTGATGGTCTTA 178830 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || | ||||||||||| || ||||| Sbjct 178831 CCGGTTAAGGTCTTCACAAAAATCTGCAT 178859 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| || ||||| || || | | |||| || || || ||||||||||| Sbjct 179580 CTCCTTCTGGATATTGTAATCAGCCAATGTTCTGCCGTCCTCAAGCTGCTTTCCGGCGAA 179639 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| || || ||||| | || ||||||||| || || |||||| Sbjct 179640 GATCAACCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTT 179699 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | ||||| | ||| ||||||| ||| || ||||||||||||| || || || Sbjct 179700 GTCAATTGTGTCCGAGCTCTCAACCTCCAAGGTGATGGTCTTGCCCGTCAACGTTTTAAC 179759 Query 45325 AAAGATTTGCAT 45336 || || ||||| Sbjct 179760 GAAAATCTGCAT 179771 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||| ||| || || |||| |||| || ||||||||||| Sbjct 180037 TCCTTCTGGATGTTGTAATCGGCAAGAGTACGGCCGTCTTCCAACTGCTTTCCGGCGAAG 180096 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | || ||| || || || || | |||||||| ||| | | || |||| | || Sbjct 180097 ATAAGCCTCTGCTGATCCGGTGGGATTCCCTCCTTATCCTGGA-TCTTGGCTTTAACGTT 180155 Query 45266 G-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| || |||||||| | ||| |||||||| || || |||||||| || Sbjct 180156 GTCGATCGTGTCAGAACTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAAC 180215 Query 45325 AAAGATTTGCAT 45336 ||||| ||||| Sbjct 180216 GAAGATCTGCAT 180227 >seq69 Length=847923 Score = 102 bits (112), Expect = 6e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45108 CGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT 45167 |||| ||||| | || | ||||| || ||||| |||||||| |||||||||||| Sbjct 38663 CGCCTCCTCTAAGCCTAAGGACCAAATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGG 38604 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 ||| ||| | || |||||||||||||||||||| |||| |||||| || || || | Sbjct 38603 CGAGTGTCCGACCATCTTCCAGTTGTTTTCCGGCGAAGATCAGCCGCTGCTGATCCGGCG 38544 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | || ||||||||| || || || || | | ||||| || | Sbjct 38543 GGATGCCTTCCTTGTCCTGGATCTTAGCTTTCACATTGTCGATCGTGTCCGATGATTCAA 38484 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| | || || ||||| |||| ||||||||||| || || ||||| Sbjct 38483 CCTCGAGTGTTATTGTCTTCCCCGCAAGAGTCTTCACGAAAATCTGCAT 38435 >seq49 Length=794425 Score = 100 bits (110), Expect = 2e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| || | |||||||| || || ||| || || || ||||| || | Sbjct 171152 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGGATATTGTAATCAGCC 171211 Query 45170 AG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || | ||| ||| ||| || ||||| ||||| || || | || ||| ||||||||| Sbjct 171212 AGAGTTCGGCCATCCTCG---AGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCGGGA 171268 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | || || || ||| || || ||| || | | | ||||| | || Sbjct 171269 GGGATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTTTCT 171328 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| | ||| ||||||||||| || |||||||| |||||||| ||||| Sbjct 171329 ACCTCGAGGGTTATCGTCTTGCCTGTAAGAGTCTTAACAAAGATCTGCAT 171378 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||||||| || | ||||||||||| || || ||||| || ||||| || | | Sbjct 170696 CCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGATTCTTTCTGGATATTGTAATC-TGC 170754 Query 45170 ---AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 |||| || | || || || || || || ||||| || | || ||| ||||| ||| Sbjct 170755 AAGAGTT--CGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGCCTCTGCTGGTCCGGA 170812 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | || ||||||||| ||| ||| ||| || | | ||||| | ||| Sbjct 170813 GGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTGTCGATAGTGTCCGAGCTCTCA 170872 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || | ||| || || ||||| || || || || |||||||| ||||| Sbjct 170873 ACTTCTAGGGTGATGGTTTTGCCTGTAAGGGTTTTAACAAAGATCTGCAT 170922 >seq986 Length=79754 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||||||||| || | || |||| | || || || ||||| || ||| | Sbjct 27372 TCCTTCTGAATGTTGTAATCCTCAAGAGTGCGACCATCCTCGAGCTGTTTACCAGCGTAG 27313 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | | ||| ||||| || || | || |||||||| ||| || ||| || | Sbjct 27312 ATAAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCTTGAATCTTGGTCTTGACATCG 27253 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | || ||||| | ||| || |||||||| || ||||| || ||| Sbjct 27252 TCAATGGTGTCTAAGCTTTCGACCTCAAGGGTTATGGTCTTGCCTGTAAGAGTGTTGACA 27193 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 27192 AAGATCTGCAT 27182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395042612222128