Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq252 158 1e-33 seq187 150 2e-31 seq442 141 9e-29 seq65 131 2e-25 seq5102 113 4e-20 seq130 111 1e-19 seq49 111 1e-19 seq70 104 2e-17 seq986 93.3 4e-14 >seq252 Length=291119 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| ||| || || | ||||||||||| ||||||||||||||| | Sbjct 178861 CCACCACGCAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCC 178920 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | ||||||||||||||||||| Sbjct 178921 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 178980 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || |||| | || | || |||| | ||||| Sbjct 178981 ATGCCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCGACT 179040 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||||| ||| || |||||||||||||| Sbjct 179041 TCAAGGGTGATCGTCTTGCCGGTTAAAGTCTTCACGAAAATCTGCAT 179087 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||||||||| |||||||| || | Sbjct 178633 CCACCACGAAGACGGAGAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCAGCC 178692 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| |||| | ||||||||||||||||||| Sbjct 178693 AATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 178752 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | || | || || | | ||| | Sbjct 178753 ATCCCTTCCTTGTCTTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCAACC 178812 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| |||||||||| || || || ||||||||||| Sbjct 178813 TCCAGTGTGATGGTCTTACCGGTTAAGGTCTTCACAAAAATCTGCAT 178859 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| ||| || || | ||||||||||||||||||||||||||| | Sbjct 179089 CCACCACGCAGACGCAACACCAAGTGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCC 179148 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | ||||||||| |||||||| Sbjct 179149 AATGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGA 179208 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || || || ||||| | || | || || | | ||| | Sbjct 179209 ATGCCTTCCTTATCCTGTATCTTGGCCTTGACATTATCGATTGTGTCAGAGCTCTCCACC 179268 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || || || || || || |||||||| Sbjct 179269 TCGAGTGTAATCGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 179315 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTC 131081 ||||| | ||| | ||||||||||| || || |||||||| || ||| | || ||| Sbjct 179560 AGCACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCAGCCAATGTTCTGC-CGTC 179618 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||||||| || ||| |||| || | |||||| ||||||||||| ||||| ||||| Sbjct 179619 CTCAAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATGCCTTCCTTGTC 179678 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||| | | || | || || | | ||| | || | ||| | ||| Sbjct 179679 CTGGATCTTGGCCTTAACGTTGTCAATTGTGTCCGAGCTCTCAACCTCCAAGGTGATGGT 179738 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || | ||||| |||||||||||||| Sbjct 179739 CTTGCCCGTCAACGTTTTAACGAAAATCTGCAT 179771 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| || || | || |||||||| ||||||||||| ||| | Sbjct 179317 CCACCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCC 179376 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| |||||||| || ||| |||| || | ||||| |||||||| Sbjct 179377 AATGTTCTGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGA 179436 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | || || | | ||| | Sbjct 179437 ATGCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTGTCAATCGTGTCCGAGCTCTCCACC 179496 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | ||||| |||||||||||||| Sbjct 179497 TCCAATGTGATCGTCTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 179543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||||| ||| | ||||||||||| || |||||||| || | || || |||| Sbjct 179788 AGCACTAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGTCCGTCC 179847 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || || ||||| || ||| |||| | | |||||||| || ||||| || || ||||| Sbjct 179848 TCGAGTTGCTTCCCGGCGAAGATCAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTGTCT 179907 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 |||||| ||||| | || | || || | ||| | |||| ||| | || Sbjct 179908 TGGATTTTAGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGGGTGATCGTC 179967 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| ||||| ||||| |||||||| Sbjct 179968 TTTCCCGTTAGGGTTTTGACGAAGATCTGCAT 179999 >seq187 Length=227058 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 169678 GCCACCACGGAGACGGAGGACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 169737 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| |||||||| || ||| | || || ||||||||||||||||| Sbjct 169738 GAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGAGG 169797 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| ||| ||||| | || | || |||| |||||||| Sbjct 169798 GATTCCTTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCGAC 169857 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || || ||||| ||||| |||||||| Sbjct 169858 CTCAAGGGTGATTGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCAT 169905 >seq442 Length=166222 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||| ||| || || | ||||||||||| ||||||||||||||| Sbjct 81785 GCCACCACGGAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGC 81726 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| |||||||| || ||| |||| | |||||||||||||||||| Sbjct 81725 CAATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 81666 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| ||| ||| | | || | || || | | ||||| Sbjct 81665 AATACCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGCTCTCGAC 81606 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| || || || |||||||| ||||| Sbjct 81605 CTCCAAGGTGATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||||||| || |||||||| || | Sbjct 82012 CCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 81953 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| | || | |||||||||||| |||||| Sbjct 81952 AATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCTGGAGGG 81893 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | || | ||| || | | ||||| Sbjct 81892 ATACCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCGACT 81833 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || ||||| || ||||| ||||| ||||||||| Sbjct 81832 TCAAGGGTGATTGTCTTGCCGGTAAGGGTTTTCACGAATATCTGCATG 81785 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | ||| | |||||||||||| || |||||||| || | || || |||| Sbjct 81085 AGCACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCGGCCGTCC 81026 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || || ||||| || ||| |||| || | ||||||||||||||| || ||||| ||||| Sbjct 81025 TCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCT 80966 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| || ||||| | || | || |||| | ||| | |||| ||| | || Sbjct 80965 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATCGTC 80906 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| ||||| ||||| |||||||| Sbjct 80905 TTTCCTGTTAGGGTTTTGACGAAGATCTGCAT 80874 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || ||||| || || || ||||||||| | Sbjct 81556 CCACCACGGAGACGGAGGACCAAGTGAAGCGTTGACTCTTTCTGGATATTGTAATCGGCC 81497 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || | |||||||||||||||| Sbjct 81496 AAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 81437 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| |||||| ||| | | || | || |||| | || | Sbjct 81436 ATTCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCAACC 81377 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | || || ||||| |||||||| Sbjct 81376 TCCAAAGTGATGGTCTTTCCCGTCAAGGTCTTGACGAAGATCTGCAT 81330 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | |||||||||||| || |||||||| ||| || || || ||| Sbjct 80857 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTTCGGCCGTCT 80798 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || | |||||| || ||| |||| | | |||||| |||||||| || ||||| || || Sbjct 80797 TCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTATCC 80738 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 |||||| |||| | | | || | || || | | || | |||| ||| | || Sbjct 80737 TGGATTTT-GGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGT 80679 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||||| ||||| || ||||| |||||||| Sbjct 80678 CTTCCCGGTCAGAGTCTTAACGAAGATCTGCAT 80646 >seq65 Length=625306 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | ||||||||||| || |||||||| ||| Sbjct 412918 CCACCACGGAGACGGAGCACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 412977 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || ||||| || || ||| | || || |||||||||||||| ||| Sbjct 412978 AGCGTGCGGCCGTCTTCCAGCTGTTTCCCCGCGAAAATCAATCGCTGCTGGTCCGGCGGG 413037 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| ||| |||| | || | || || | ||| |||| Sbjct 413038 ATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 413097 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || ||||| ||||| |||||||| Sbjct 413098 TCAAGGGTTATGGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 413144 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | ||||||||||| || |||||||| ||| | Sbjct 276490 CCACCACGAAGACGGAGAACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 276431 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| |||| | ||||||||||||||||||| Sbjct 276430 AATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 276371 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | || | || || | | ||| | Sbjct 276370 ATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTATCAATCGTGTCCGAGCTCTCAACC 276311 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| |||||||| | || || |||||||||||||| Sbjct 276310 TCCAGAGTGATGGTCTTACCGGTCAATGTCTTCACGAAAATCTGCAT 276264 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || |||| ||| | ||||||||||| ||||||||||| || | || || |||| Sbjct 275791 AGAACTAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCC 275732 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || |||||||| || ||| |||| | |||||||||||||||||||||||| ||||| || Sbjct 275731 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCC 275672 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||||| ||||| | || | || || | | ||| | |||| ||| | || Sbjct 275671 TGAATTTTGGCCTTGACGTTATCGATTGTGTCAGAGCTCTCCACCTCGAGGGTGATCGTC 275612 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| ||||| ||||| || ||||| Sbjct 275611 TTTCCCGTTAGGGTTTTGACGAATATTTGCAT 275580 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | || |||||||| |||||||||||||| | Sbjct 276262 CCTCCACGAAGACGGAGAACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGCC 276203 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||||||||||||| Sbjct 276202 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 276143 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| ||||| || || || ||| | | || | || || | | ||| | Sbjct 276142 ATTCCCTCTTTATCCTGAATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTCTCCACC 276083 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| || || || || || || || ||||| || ||||| Sbjct 276082 TCGAGGGTAATCGTCTTGCCAGTGAGTGTCTTCACGAAGATTTGCAT 276036 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||||| ||| || || | || |||||||| || |||||||| || || Sbjct 276034 CCACCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCC 275975 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 ||| | || ||| || |||||||| || ||| |||| | | |||||| |||||||| Sbjct 275974 AATGTTCTGCC-GTCTTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGATCCGGAGG 275916 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| || ||| | | || | || || | | ||| | Sbjct 275915 AATGCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCCAC 275856 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| || || || | ||||| ||||| |||||||| Sbjct 275855 CTCCAGGGTAATGGTCTTGCCCGTCAAGGTTTTAACGAAGATCTGCAT 275808 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||||||| || || | ||| || | |||||| || Sbjct 275548 GTCGACTCCTTCTGGATGTTGTAATCGGCCAATGTTCTGCCGTCTTCCAACTGCTTTCCG 275489 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||||| | |||||| ||||| |||||||| || || || ||| || |||| Sbjct 275488 GCGAAGATTAGCCTCTGCTGATCCGGTGGGATTCCCTCCTTATCCTGGATCTT-GGCTTT 275430 Query 131158 AGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | | || | || || | | || | || | ||| | ||||| ||||| ||||| Sbjct 275429 AACGTTGTCGATCGTGTCAGAGCTTTCCACCTCAAGGGTGATCGTTTTCCCGGTGAGAGT 275370 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 275369 CTTAACGAAGATCTGCAT 275352 >seq5102 Length=3010 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | |||||||||||| || ||||| || || | Sbjct 2699 CCACCACGAAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCAGCC 2758 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| || || ||| |||| | |||||||||||||||||| Sbjct 2759 AATGTGCGACCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2818 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | || | || |||| | ||||| Sbjct 2819 ATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCGACT 2878 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || | || || |||||||||||||| Sbjct 2879 TCAAGTGTGATTGTCTTCCCCGTCAAGGTCTTGACGAAAATCTGCAT 2925 >seq130 Length=298546 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 |||||| || || || |||||||| ||||| | ||||||||||||| || ||||| Sbjct 143368 ACGCAGTACCAAGTGAATGGTCGAGTCCTTCTTGATGTTGTAATCGCCCAATGTGCGACC 143427 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||||| ||||| ||||| ||| |||| | | |||||||||||| || || || ||||| Sbjct 143428 ATCCTCAAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATACCCTCTTT 143487 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || ||| || ||| | | || | || || | | || | || | ||| | Sbjct 143488 ATCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCCGAGTCTTCCACTTCTAAGGTGAT 143547 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTT 131239 ||| || || || | ||| ||||||||||||||| ||| || Sbjct 143548 GGTCTTCCCTGTCAAAGTCTTTACGAAAATCTGCTTGATTT 143588 >seq49 Length=794425 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | || ||| ||||| ||||| | ||| || || || || ||||||||||| Sbjct 170240 CCACCTCTCAGACGGAGCACCAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCTGCA 170299 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||||||||| ||||| ||| | || | | |||||||||||||||| Sbjct 170300 AGCGTTCGACCATCCTCTAGCTGTTTGCCAGCGAATATGAGTCTCTGCTGGTCCGGAGGG 170359 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | || ||||| | || | ||| || | | || | Sbjct 170360 ATCCCTTCCTTGTC-TTGAATCTTTGCCTTGACATTGTCAATAGTGTCCGAGCTTTCAAC 170418 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| || || ||||| || ||||| |||||||| Sbjct 170419 TTCCAATGTTATGGTTTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 170466 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| | || | || |||||||| || ||||||||||| Sbjct 170012 CCACCACGAAGACGCAACACAAGGTGAAGCGTTGACTCCTTCTGTATGTTGTAATCAGCA 170071 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||||||||| ||||| ||| |||| | | ||| || ||||||||| Sbjct 170072 AGAGTGCGACCATCCTCTAGCTGTTTGCCGGCGAAGATGAGTCTCTGTTGATCCGGAGGG 170131 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| | | |||| | | | || | || || | | ||| | Sbjct 170132 ATTCCTTCCTTGTC-TTGAATCTTCGCTTTAACATTGTCGATTGTGTCTGAGCTCTCCAC 170190 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||||||||| || || || || || |||||||| Sbjct 170191 TTCCAATGTTATGGTTTTACCGGTAAGGGTCTTGACAAATATCTGCAT 170238 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| ||||||||||| || |||||||| || || || ||| Sbjct 170939 AGAACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCAGCCAAAGTACGGCCATCC 170998 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||| || || || |||| | | ||| || |||||||||||||||||||| || Sbjct 170999 TCGAGCTGTTTACCGGCAAAGATCAGCCTCTGTTGATCCGGAGGGATTCCTTCTTTATCC 171058 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 || || ||||| | || | ||||| | | ||| | || | ||| | |||| Sbjct 171059 TGAATCTTAGCCTTGACATTGTCGATGGTATCCGAGCTCTCAACTTCTAGGGTGATGGTT 171118 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || ||||| || ||||| ||||| Sbjct 171119 TTGCCAGTGAGGGTTTTAACAAAAATTTGCAT 171150 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| ||||| || || || |||||||| | ||||| || Sbjct 170483 AGAACCAAGTGCAGGGTTGACTCTTTCTGGATATTGTAATCAGCGAGAGTGCGGCCATCT 170542 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||| ||||||||| |||| | | ||| |||||||||||||| ||||| ||||| Sbjct 170543 TCAAGCTGTTTGCCTGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTC- 170601 Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| | | |||| | | | || | || || | | ||| | || | ||| | ||| Sbjct 170602 TTGAATCTTAGCTTTAACATTGTCGATTGTGTCTGAGCTCTCAACTTCTAGGGTGATGGT 170661 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || ||||| ||||| |||||||| Sbjct 170662 TTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 170694 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 || || || || | ||| || || || || || |||||||| | || || || Sbjct 170711 AGAACCAAGTGCAGGGTTGATTCTTTCTGGATATTGTAATCTGCAAGAGTTCGGCCATCT 170770 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||||||||||||| |||| | | ||||||||||||||| || ||||| ||||| Sbjct 170771 TCAAGCTGCTTGCCTGCGAAGATAAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGTC- 170829 Query 131143 GTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| | | || ||||| | || | ||| || | | ||| | || | ||| | ||| Sbjct 170830 CTGAATCTTTGCCTTGACATTGTCGATAGTGTCCGAGCTCTCAACTTCTAGGGTGATGGT 170889 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || ||||| || || |||||||| Sbjct 170890 TTTGCCTGTAAGGGTTTTAACAAAGATCTGCAT 170922 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAAT-CGCT 131066 ||||| || | ||| || || | || | |||||||| || ||||||||||||| |||| Sbjct 169784 CCACCACGGAGACGGAGAACAAGGTGAAGTGTCGACTCTTTCTGAATGTTGTAATCCGCT 169843 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || || || |||||||| || || | |||| | ||||||||| || || Sbjct 169844 -AGAGTCCGACCATCTTCAAGCTGCTTCCCGGCAAATATTAGCCTCTGCTGGTCAGGTGG 169902 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || ||||| | || | ||||| | | ||||| Sbjct 169903 GATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTATCAGAGCTCTCGAC 169962 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | ||| || || || |||||||| Sbjct 169963 CTCAAGAGTGATGGTCTTTCCCGTCAAAGTCTTGACAAATATCTGCAT 170010 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || || | ||| ||||| ||||| || |||||||| | Sbjct 171152 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGGATATTGTAATCAGCC 171211 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||| || || || |||| | | ||||||||| |||||| Sbjct 171212 AGAGTTCGGCCATCCTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 171271 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||| || ||||| | || | || || | | || | Sbjct 171272 ATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTTTCTACC 171331 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || || ||||| || || || |||||||| Sbjct 171332 TCGAGGGTTATCGTCTTGCCTGTAAGAGTCTTAACAAAGATCTGCAT 171378 >seq70 Length=414679 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| || || || || | ||||||||||| || |||||||| || Sbjct 19320 CCTCCTCTCAGACGGAGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 19379 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || |||||||| || ||| |||| | ||||||||| ||||| ||| Sbjct 19380 AGAGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 19439 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | || | ||||| | || || | Sbjct 19440 ATCCCTTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATCGTATCCGACGATTCAACC 19499 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || ||||| ||||| ||||| |||||||| Sbjct 19500 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 19546 >seq986 Length=79754 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATG-GTGCGCGAGTCCTC 131084 || ||||| | || || ||||| |||||||||||||| |||| | ||||| ||||| Sbjct 27390 ACAAAATGGAGAGTAGATTCCTTCTGAATGTTGTAATC-CTCAAGAGTGCGACCATCCTC 27332 Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 ||||| || || |||||||| | | ||||||||| || ||||| ||||| ||||| Sbjct 27331 GAGCTGTTTACCAGCGTAGATAAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCTTG 27272 Query 131145 GATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 || || ||||| | || | || || | |||| || | ||| | ||| || Sbjct 27271 AATCTTGGTCTTGACATCGTCAATGGTGTCTAAGCTTTCGACCTCAAGGGTTATGGTCTT 27212 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| || || || |||||||| Sbjct 27211 GCCTGTAAGAGTGTTGACAAAGATCTGCAT 27182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471972867717120