Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq49 114 1e-20 seq252 113 5e-20 seq65 109 6e-19 seq442 107 2e-18 seq187 91.5 2e-13 >seq49 Length=794425 Score = 114 bits (126), Expect = 1e-20 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||| | |||||||||||| || || || || || |||||||| || Sbjct 170239 ACCACCTCTCAGACGGAGCACCAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCTGC 170298 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || |||||||| || |||||||||||||||| ||||||||| | || Sbjct 170299 AAGCGTTCGACCATCCTCTAGCTGTTTGCCAGCGAATATGAGTCTCTGCTGGTCCGGAGG 170358 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||||||| | ||| | |||| |||| | | | ||||| ||| || Sbjct 170359 GATCCCTTCCTTGT-CTTGAATCTTTGCCTTGACATTGTCAATAGTGTCCGAGCT---TT 170414 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | || ||||||||||| || || ||||| || ||||| ||||| Sbjct 170415 CAACTTCCAATGTTATGGTTTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 170466 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| || | | ||||| |||| || ||| || || |||||||||||||| Sbjct 170467 ACCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGACTCTTTCTGGATATTGTAATCAGC 170526 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || ||||| || || ||||| ||||||| ||| ||||| | || Sbjct 170527 GAGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCGAAGATGAGTCTCTGTTGGTCCGGAGG 170586 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | ||||||| | ||| | || | || | | | | | | ||||| |||| | Sbjct 170587 GATCCCTTCCTTGT-CTTGAATCTTAGCTTTAACATTGTCGATTGTGTCTGAGCTC---T 170642 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||||||||| || || || || || ||||| ||||| Sbjct 170643 CAACTTCTAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 170694 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| || | | ||||| |||| || || || || ||||||||||| || Sbjct 170695 ACCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGATTCTTTCTGGATATTGTAATCTGC 170754 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || |||||||| || ||||| || || | ||||||||| | || Sbjct 170755 AAGAGTTCGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGCCTCTGCTGGTCCGGAGG 170814 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||||||||| ||| | |||| |||| | | | ||||| |||| | Sbjct 170815 AATCCCTTCCTTGTCC-TGAATCTTTGCCTTGACATTGTCGATAGTGTCCGAGCTC---T 170870 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | |||||||||||||| || || || || |||||||| ||||| Sbjct 170871 CAACTTCTAGGGTGATGGTTTTGCCTGTAAGGGTTTTAACAAAGATCTGCAT 170922 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | | ||||| || | || ||| ||||| |||||||||||||| Sbjct 171151 ACCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGGATATTGTAATCAGC 171210 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||| || | || || ||||| ||||| || || ||||| | ||||||||||| || Sbjct 171211 CAGAGTTCGGCCATCCTCGAGCTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCGGGAGG 171270 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATT 42156 | | || || ||| ||| || |||| ||| | | | ||||| ||| || Sbjct 171271 GATTCCTTCTTTATCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGCT---TT 171326 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || |||| || || || ||||| || || ||||| |||||||| ||||| Sbjct 171327 CTACCTCGAGGGTTATCGTCTTGCCTGTAAGAGTCTTAACAAAGATCTGCAT 171378 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||||||| | || | || |||||| || || ||||||||||| ||||| || | Sbjct 170023 ACGCAACACAAGGTGAAGCGTTGACTCCTTCTGTATGTTGTAATCAGCAAGAGTGCGACC 170082 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || |||||||| || || ||||| ||||||| ||| || || | || | | ||||| Sbjct 170083 ATCCTCTAGCTGTTTGCCGGCGAAGATGAGTCTCTGTTGATCCGGAGGGATTCCTTCCTT 170142 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || | ||| | || | || | | | | | | ||||| |||| ||||| || | | Sbjct 170143 GT-CTTGAATCTTCGCTTTAACATTGTCGATTGTGTCTGAGCTC---TCCACTTCCAATG 170198 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| || || || ||||| ||||| || ||||| Sbjct 170199 TTATGGTTTTACCGGTAAGGGTCTTGACAAATATCTGCAT 170238 >seq252 Length=291119 Score = 113 bits (124), Expect = 5e-20 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || |||||| ||||| |||||||| |||| || || | Sbjct 178872 ACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGTGCGACC 178931 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| ||||||||||| | || | || ||||| Sbjct 178932 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTT 178991 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 |||| ||| || ||||| | | | ||||| |||| || || || | || Sbjct 178992 GTCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTC---TCGACTTCAAGGGT 179048 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || ||||| |||| ||||| || || || ||||| Sbjct 179049 GATCGTCTTGCCGGTTAAAGTCTTCACGAAAATCTGCAT 179087 Score = 107 bits (118), Expect = 2e-18 Identities = 156/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || |||||||||||| |||||||| |||| || || | Sbjct 179100 ACGCAACACCAAGTGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCCAATGTGCGACC 179159 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| ||||| |||||||| || | || | || ||||| Sbjct 179160 ATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTT 179219 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| || || |||| | | | ||||| |||| ||||| |||| || Sbjct 179220 ATCCTGTATCTTGGCCTTGACATTATCGATTGTGTCAGAGCTC---TCCACCTCGAGTGT 179276 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || ||||| || || ||||| |||||||| ||||| Sbjct 179277 AATCGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 179315 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || ||||| ||||||| || || | || || ||||| || |||||||| Sbjct 178668 CTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAA 178727 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||| ||| || || | ||| Sbjct 178728 GATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATCTTCGCCTTCA-CGT 178786 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | |||||||| || || |||| |||| Sbjct 178787 TGTCAATGGTGTCCGAGCTC---TCAACCTCCAGTGTGATGGTCTTACCGGTTAAGGTCT 178843 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 178844 TCACAAAAATCTGCAT 178859 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/214 (70%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| ||| | || |||||| || |||||||||||||||| || | |||| || Sbjct 179562 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCAGCCAATGTTCTGCCGTCCTC 179621 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| || | | |||||| || | || | || ||||||||| | Sbjct 179622 AAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCC-T 179680 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 42174 | | || | | | ||| | | | ||||| |||| || || || | ||||||| Sbjct 179681 GGATCTTGGCCTTAACGTTGTCAATTGTGTCCGAGCTC---TCAACCTCCAAGGTGATGG 179737 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||||||| | ||| || || || || ||||| Sbjct 179738 TCTTGCCCGTCAACGTTTTAACGAAAATCTGCAT 179771 >seq65 Length=625306 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| ||||| ||||| || |||| || |||||||| || ||||| Sbjct 275771 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 275712 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | || | | ||| || ||| ||| |||| | |||| Sbjct 275711 GATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCC-TGAATTTTGGCCTTGACGT 275653 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| ||||| |||| ||||| || || |||||||| || | Sbjct 275652 TATCGATTGTGTCAGAGCTC---TCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTT 275596 Query 42193 TTACAAAGATTTGCAT 42208 | || || |||||||| Sbjct 275595 TGACGAATATTTGCAT 275580 Score = 102 bits (112), Expect = 9e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | ||| | ||||| || | ||| |||||| ||||| |||||||| || Sbjct 276263 ACCTCCACGAAGACGGAGAACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGC 276204 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| |||||||| ||||| ||||||||||| | || Sbjct 276203 CAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 276144 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | | ||| || ||| ||| | || | || | | | | ||||| |||| | Sbjct 276143 GATTCCCTCTTTATCC-TGAATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTC---T 276088 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| |||| || || || ||||| || || ||||| || ||||||||||| Sbjct 276087 CCACCTCGAGGGTAATCGTCTTGCCAGTGAGTGTCTTCACGAAGATTTGCAT 276036 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | ||| |||||| || || ||||| ||||||| || | | Sbjct 276023 ACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAATGTTCTGCC 275964 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || ||||| || || | |||||| || | || | || || || Sbjct 275963 GTCTTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCTTT 275904 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || || | ||| | | | ||||| |||| ||||| || | | Sbjct 275903 GTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCCGAGCTC---TCCACCTCCAGGG 275848 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||||| |||||||| | || || || ||||| ||||| Sbjct 275847 TAATGGTCTTGCCCGTCAAGGTTTTAACGAAGATCTGCAT 275808 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||| || || ||||| Sbjct 412953 CTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCTTCCAGCTGTTTCCCCGCGAA 413012 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | |||||||||||| | || | | |||||||| ||| || ||||| | Sbjct 413013 AATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATT 413072 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||||| || || | || ||||| || ||||| || || || || Sbjct 413073 GTCGATGGTGTCAGAGGATTCGACCTCAAGGGTTATGGTCTTCCCCGTAAGGGTTTTCAC 413132 Query 42197 AAAGATTTGCATTTT 42211 ||||| ||||| || Sbjct 413133 GAAGATCTGCATCTT 413147 >seq442 Length=166222 Score = 107 bits (118), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || |||||| ||||| |||||||| |||| || || | Sbjct 81773 ACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCCAATGTGCGACC 81714 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| ||||||||||| | || | | ||||| Sbjct 81713 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTT 81654 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| || || | ||| | | | ||||| |||| || || || | | Sbjct 81653 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCAGAGCTC---TCGACCTCCAAGG 81598 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || ||||| || || ||||| || || |||||||| Sbjct 81597 TGATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 Score = 102 bits (112), Expect = 9e-17 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| || | ||| |||||| || || ||||| ||||||| ||| || | Sbjct 81317 ACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTTCGGCC 81258 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || || ||||| || ||||| || | || |||||| || | || | | ||||| Sbjct 81257 GTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTT 81198 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCG 42168 |||| |||||| || | ||| | || |||||| ||| ||||| || | | Sbjct 81197 GTCCTGGATTTTAGCCTTCA-CGTTGTCAATAGTGTCGGAGCTC---TCCACTTCCAAAG 81142 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| || || || | |||||| || ||||||||||| Sbjct 81141 TGATGGTCTTTCCGGTCAACGTCTTGACGAAGATTTGCAT 81102 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || ||||||||||| |||| || || | || || |||||||| || ||||| Sbjct 81521 CTCTTTCTGGATATTGTAATCGGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 81462 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | ||||||||| | || | | |||||||||| |||||| || | ||| Sbjct 81461 GATCAACCTCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCA-CGT 81403 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || | |||||||| || ||||| | ||||| | Sbjct 81402 TGTCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTTCCCGTCAAGGTCTTGA 81343 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 81342 CGAAGATCTGCAT 81330 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| || || | || || |||||||| |||||||| Sbjct 81977 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 81918 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || || | ||| Sbjct 81917 AATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 81859 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | ||||| || ||||| || || || | Sbjct 81858 TGTCAATAGTGTCAGAGCTC---TCGACTTCAAGGGTGATTGTCTTGCCGGTAAGGGTTT 81802 Query 42193 TTACAAAGATTTGCAT 42208 | || || || ||||| Sbjct 81801 TCACGAATATCTGCAT 81786 >seq187 Length=227058 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 169714 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAA 169773 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | |||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 169774 AATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTGACATT 169833 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || || || || | ||||| || || ||||| || || || || Sbjct 169834 GTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATTGTCTTCCCCGTCAGGGTTTTCAC 169893 Query 42197 AAAGATTTGCATTTT 42211 ||||| |||||||| Sbjct 169894 GAAGATCTGCATTTT 169908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543166844197120