Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq69 118 1e-21 seq49 111 2e-19 seq442 107 2e-18 seq252 107 2e-18 seq65 104 2e-17 seq187 102 8e-17 seq5102 86.0 6e-12 seq70 84.2 2e-11 >seq69 Length=847923 Score = 118 bits (130), Expect = 1e-21 Identities = 346/517 (67%), Gaps = 22/517 (4%) Strand=Plus/Plus Query 52329 CCGTGCGTTCGCAAA-AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCAC 52387 || ||||| ||| || ||||| |||||||| |||| ||||||||| || || || Sbjct 356813 CCTTGCGT-CGCGAAGAAGGCGCAGTGGGCGATGACGTGGATCGA---CGGATCCCAGAC 356868 Query 52388 GCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447 | || ||||| || || ||||||||| ||||| ||| | || || ||||| ||||| Sbjct 356869 TTTCGCGGAGCGTATCGTCGCCTTCGCCTGCGTCGAAGGCATCTTCTTCTCCGGTAGCTT 356928 Query 52448 TGCCGCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505 | | || || | | || |||| ||| | ||||| || || || ||| |||| Sbjct 356929 CTGCTCGATTTTCTGGCTGAAGAAACGCG-GGC-TCATGCCGGGACTAACCTTCTCCAAC 356986 Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACG 52565 |||||||| || || |||||||| ||||| || || ||||||||| |||| || Sbjct 356987 GAGTTGATCTCTCGAGACGAAGGCTTGCACTGCGATTTCGCGTGCCTCATCTAC---ACT 357043 Query 52566 CGCGTGACCGAAAAATTGGATTCGGACACGATCCTGA---GCATGTTCAAGGAGGCGGTG 52622 | ||| || || | ||||| | | ||| || || || || || Sbjct 357044 CTGTTGA-GGACGAA--GCTCTCGGAGGAGCGCGTGAAGTCGATCGTCTGCGACGCCGTC 357100 Query 52623 GCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCG 52682 | ||||| | ||||||| | | |||||| || || | || |||| |||||| | Sbjct 357101 GAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCCTGCGCGTTGGTGGGGATGAACCGG 357160 Query 52683 CAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTT-GGTGCAGCTCGGGCA 52741 | ||| || |||| ||||| ||||| |||||| | || || ||||| ||| ||| | Sbjct 357161 GACCTGATGAGCCAGTATATCGAATTTGTTGCGGATAGGCTTTTGGGTGC-GCTTGGGTA 357219 Query 52742 GCCAAAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800 ||| | | | | || ||||||||||| | ||| | || |||||| ||| Sbjct 357220 CGGGAAGGTGTACGGTG-TGGCGAATCCGTTTGATTGGATGGAGTTAATCTCGCTTCAGG 357278 Query 52801 GCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | || || ||||| |||||||||||||| || || || Sbjct 357279 GTAAAACAAACTTCTTCGAGAAGCGAGTGGGTGATTA 357315 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | || || || || |||||||| |||| Sbjct 38628 GATTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGACCATCTTCCAGTTGTTTTCCGGCG 38569 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| || ||||| || || ||||| ||||| ||| || ||| | | Sbjct 38568 AAGATCAGCCGCTGCTGATCCGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTCACA 38509 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||||| | || || ||||||| || | || || || | ||||| || Sbjct 38508 TTGT-CGATCGTGTCCGATGATTCAACCTCGAGTGTTATTGTCTTCCCCGCAAGAGTCTT 38450 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 38449 CACGAAAATCTGCAT 38435 >seq49 Length=794425 Score = 111 bits (122), Expect = 2e-19 Identities = 154/212 (73%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| || || | | ||||||||||||| || ||||| || || |||||| ||||| Sbjct 170941 AACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCAGCCAAAGTACGGCCATCCTC 171000 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||| |||||||||| | |||| || | |||||| |||||||| || |||||||| || | Sbjct 171001 GAGCTGTTTACCGGCAAAGATCAGCCTCTGTTGATCCGGAGGGATTCCTTCTTTATC-CT 171059 Query 138525 GATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 || | || | || |||| || | ||| || | ||| || || | || | ||| Sbjct 171060 GAATCTTAGCCTTGACATTG-TCGATGGTATCCGAGCTCTCAACTTCTAGGGTGATGGTT 171118 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| || ||||| |||||||| ||||| Sbjct 171119 TTGCCAGTGAGGGTTTTAACAAAAATTTGCAT 171150 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | ||| || || | | ||||||| || || || ||||| || Sbjct 170468 CCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGACTCTTTCTGGATATTGTAATCAGCG 170527 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || ||||| || | |||| || | ||||||||||||||| Sbjct 170528 AGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 170587 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | |||| |||| || | ||||| | ||| | Sbjct 170588 ATCCCTTCCTTGTC-TTGAATCTTAGCTTTAACATTG-TCGATTGTGTCTGAGCTCTCAA 170645 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| ||||| || ||||| || || |||||||| Sbjct 170646 CTTCTAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 170694 >seq442 Length=166222 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| || |||||||||||| || |||| Sbjct 81067 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCGGCCGTCCTCGAGTTGCTTTCCGGCG 81008 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 81007 AAGATCAACCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACG 80948 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| || | ||| || || || || ||||| Sbjct 80947 TTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATCGTCTTTCCTGTTAGGGTTTTG 80888 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 80887 ACGAAGATCTGCAT 80874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||| || ||| || | || || |||| Sbjct 80839 GACTCCTTCTGGATGTTGTAGTCGGCCAAAGTTCGGCCGTCTTCCAACTGCTTTCCGGCG 80780 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| || |||||||| || ||||| || || || |||| | ||||| Sbjct 80779 AAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTATC-CTGGATTTTGGCTTTAAC 80721 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | |||||||||| || | || || || |||||||| | Sbjct 80720 GTTG-TCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTCCCGGTCAGAGTCT 80662 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 80661 TAACGAAGATCTGCAT 80646 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | |||||| || || || | | |||||||| ||||||||||| ||| Sbjct 81785 GCCACCACGGAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGC 81726 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||||| || || || | |||| |||||||| ||||||||||| Sbjct 81725 CAATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 81666 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | | || | ||||| | ||| || Sbjct 81665 AATACCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGCTCTCGAC 81606 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || || ||||| ||||| Sbjct 81605 CTCCAAGGTGATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 >seq252 Length=291119 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | |||||||| ||||||||||| ||| | Sbjct 178861 CCACCACGCAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCC 178920 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || || | |||| |||||||| ||||||||||| Sbjct 178921 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 178980 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | |||||||| ||| || Sbjct 178981 ATGCCTTCCTTGTCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCGACT 179040 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || || | ||| || || ||||||||||| Sbjct 179041 TCAAGGGTGATCGTCTTGCCGGTTAAAGTCTTCACGAAAATCTGCAT 179087 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | |||||||||||||||||||| ||| | Sbjct 179089 CCACCACGCAGACGCAACACCAAGTGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCC 179148 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || |||| |||| |||||||| || |||||||| Sbjct 179149 AATGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGA 179208 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || || || || | | || | ||||| | ||||||| Sbjct 179209 ATGCCTTCCTTATCCTGTATCTTGGCCTTGACATTATCGATTGTGTCAGAGCTCTCCACC 179268 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||| || ||||| || || || ||||| |||||||| Sbjct 179269 TCGAGTGTAATCGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 179315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | ||||||||||| ||||||||||| | Sbjct 178633 CCACCACGAAGACGGAGAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTGTAGTCAGCC 178692 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || ||||| || | |||| |||||||| ||||||||||| Sbjct 178693 AATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 178752 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | |||||| | ||| ||| Sbjct 178753 ATCCCTTCCTTGTCTTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGCTCTCAACC 178812 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || | || || |||||||||||||| Sbjct 178813 TCCAGTGTGATGGTCTTACCGGTTAAGGTCTTCACAAAAATCTGCAT 178859 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||| ||||||||||||||| | Sbjct 179317 CCACCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCC 179376 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | |||||| || || || |||| |||| | | || || |||||||| Sbjct 179377 AATGTTCTGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGA 179436 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| ||| || | | || | ||||| | ||||||| Sbjct 179437 ATGCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTGTCAATCGTGTCCGAGCTCTCCACC 179496 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || |||| ||||| || ||||||||||| Sbjct 179497 TCCAATGTGATCGTCTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 179543 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| || |||||||||||| || |||| Sbjct 179806 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGTTGCTTCCCGGCG 179865 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | || ||||| || || || || || ||||| |||||| || | Sbjct 179866 AAGATCAGCCTTTGCTGGTCTGGTGGGATCCCCTCCTTGTCTTGGATTTTAGCCTTGACG 179925 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| || | ||| || || || || ||||| Sbjct 179926 TTGTCGATGGTGTCAGAACTCTCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTTG 179985 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 179986 ACGAAGATCTGCAT 179999 >seq65 Length=625306 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||| ||| | | |||||||| |||||||||||||| | ||| || |||||| Sbjct 275789 AACTAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTC 275730 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||| || || |||| |||| |||||||| ||||||||||| || || ||||| || | Sbjct 275729 GAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATC-CT 275671 Query 138525 GATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTT 138583 || |||| | || | | || | ||||| | ||||||||||| || | ||| | Sbjct 275670 GAATTTTGGCCTTGACGTTATCGATTGTGTCAGAGCTCTCCACCTCGAGGGTGATCGTCT 275611 Query 138584 TACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || || || ||||| || || || ||||| Sbjct 275610 TTCCCGTTAGGGTTTTGACGAATATTTGCAT 275580 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| ||||| | | |||||||| || |||||||||||| | Sbjct 276490 CCACCACGAAGACGGAGAACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 276431 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || ||||| || | |||| |||||||| ||||||||||| Sbjct 276430 AATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 276371 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| ||| || | | || | ||||| | ||| ||| Sbjct 276370 ATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTATCAATCGTGTCCGAGCTCTCAACC 276311 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| |||| || || || ||||||||||| Sbjct 276310 TCCAGAGTGATGGTCTTACCGGTCAATGTCTTCACGAAAATCTGCAT 276264 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | |||||||| ||||||||||| || | Sbjct 276262 CCTCCACGAAGACGGAGAACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGCC 276203 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || || || | |||| |||||||| ||||||||||| Sbjct 276202 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 276143 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || ||||| || ||| | || | || | | || | ||||| | |||||| Sbjct 276142 ATTCCCTCTTTATC-CTGAATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTCTCCAC 276084 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | ||| || ||||| || || || || || || ||||| Sbjct 276083 CTCGAGGGTAATCGTCTTGCCAGTGAGTGTCTTCACGAAGATTTGCAT 276036 >seq187 Length=227058 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 169712 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCG 169771 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||| ||||||||||| || ||||| ||||| ||| || || | | Sbjct 169772 AAAATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTGACA 169831 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||||| ||||| | || | || || || ||||| ||||| Sbjct 169832 TTG-TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATTGTCTTCCCCGTCAGGGTTTT 169890 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 169891 CACGAAGATCTGCAT 169905 >seq5102 Length=3010 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | |||||||| || ||||| ||||| | Sbjct 2699 CCACCACGAAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTATAGTCAGCC 2758 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| ||||| || | |||| |||||||| ||||||||||| Sbjct 2759 AATGTGCGACCATCCTCGAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 2818 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | |||||||| ||| || Sbjct 2819 ATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCGACT 2878 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || |||| || || || ||||||||||| Sbjct 2879 TCAAGTGTGATTGTCTTCCCCGTCAAGGTCTTGACGAAAATCTGCAT 2925 >seq70 Length=414679 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||| | ||| || || | | |||||||| || ||||||||||| Sbjct 19320 CCTCCTCTCAGACGGAGAACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 19379 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || || || || |||| |||| |||||||| || ||||| || Sbjct 19380 AGAGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 19439 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | |||| || | || || | ||| || || Sbjct 19440 ATCCCTTCCTTGTCCTGGATCTTCGCCTTCACATTG-TCGATCGTATCCGACGATTCAAC 19498 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||| || || || || ||||| || || |||||||| Sbjct 19499 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 19546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496220416200960