Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq187 140 4e-28 seq65 118 1e-21 seq252 114 1e-20 seq442 111 2e-19 seq49 100 3e-16 seq5102 82.4 9e-11 >seq187 Length=227058 Score = 140 bits (154), Expect = 4e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 169714 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAA 169773 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | ||||||||| ||||||| ||||| | Sbjct 169774 AATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTGACATT 169833 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | ||||| || || |||||||| ||||| || Sbjct 169834 GTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATTGTCTTCCCCGTCAGGGTTTTCAC 169893 Query 46582 AAAGATTTGCATTTT 46596 ||||| |||||||| Sbjct 169894 GAAGATCTGCATTTT 169908 >seq65 Length=625306 Score = 118 bits (130), Expect = 1e-21 Identities = 160/222 (72%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | || |||||| ||||| |||||||||| || ||||| | Sbjct 412929 ACGGAGCACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCC 412988 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || ||||| || || ||||| ||||| ||||||||||| | ||| | | ||||| Sbjct 412989 GTCTTCCAGCTGTTTCCCCGCGAAAATCAATCGCTGCTGGTCCGGCGGGATTCCTTCCTT 413048 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||||| |||| | | | ||||| ||||| || || | || || Sbjct 413049 GTCTTGGATCTTCGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCAAGGGTTAT 413108 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598 ||| || ||||| || ||||| || ||||| ||||| ||||| Sbjct 413109 GGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCATCTTTGC 413150 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||| || | |||| |||||| ||||| |||||||| | | || | | Sbjct 276023 ACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAATGTTCTGCC 275964 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| |||||||| |||| | |||||| || | || | || || || Sbjct 275963 GTCTTCAAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGATCCGGAGGAATGCCTTCTTT 275904 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| |||||| ||| | ||| | | | ||||| |||| ||||| |||| | Sbjct 275903 GTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCCGAGCTC---TCCACCTCCAGGG 275848 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| |||||||||| |||||||| ||||| ||||| Sbjct 275847 TAATGGTCTTGCCCGTCAAGGTTTTAACGAAGATCTGCAT 275808 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| | ||||| || |||| ||||||||||| |||||||| Sbjct 275771 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 275712 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | ||| || ||| || || ||||| | Sbjct 275711 GATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCCTGAATTTTGGCCTTGACGTT 275652 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| ||||| || | ||||| || || ||||| || ||||| Sbjct 275651 ATCGATTGTGTCAGAGCTC---TCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTTT 275595 Query 46579 AACAAAGATTTGCAT 46593 || || |||||||| Sbjct 275594 GACGAATATTTGCAT 275580 >seq252 Length=291119 Score = 114 bits (126), Expect = 1e-20 Identities = 156/214 (73%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||||||| | || |||||| ||||||||||| || | | || | |||| || Sbjct 179562 CACCAGATGAAGAGTCGACTCCTTCTGGATATTGTAATCAGCCAATGTTCTGCCGTCCTC 179621 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| |||||||| ||||| | |||||| || | || | || ||||||||| Sbjct 179622 AAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTG 179681 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGG 46559 |||||| ||| | ||| | | | ||||| |||| || || |||| ||||||| Sbjct 179682 GATCTTGGCCTT-AACGTTGTCAATTGTGTCCGAGCTC---TCAACCTCCAAGGTGATGG 179737 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||||||||| ||||||||| || || ||||| Sbjct 179738 TCTTGCCCGTCAACGTTTTAACGAAAATCTGCAT 179771 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||| || | |||| |||||| || || |||||||||| | || | | Sbjct 179328 ACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCCAATGTTCTGCC 179387 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||| |||||||| ||||| | ||||| || | || | || ||||| Sbjct 179388 GTCCTCAAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGAATGCCTTCCTT 179447 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 ||| |||||| ||| | ||| | | | |||||| |||| ||||| |||| | Sbjct 179448 GTCTTGGATCTTTGCCTTCA-CGTTGTCAATCGTGTCCGAGCTC---TCCACCTCCAATG 179503 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || ||||| |||| |||||||| || || ||||| Sbjct 179504 TGATCGTCTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 179543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||| || | || ||||||||| || ||||| |||| | ||||| | Sbjct 179100 ACGCAACACCAAGTGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCCAATGTGCGACC 179159 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || ||||||||||| |||||||| || | |||||||| || | || | || ||||| Sbjct 179160 ATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGAATGCCTTCCTT 179219 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554 ||| ||||| ||||| | | | ||||| |||| ||||| || | || Sbjct 179220 ATCCTGTATCTTGGCCTTGACATTATCGATTGTGTCAGAGCTC---TCCACCTCGAGTGT 179276 Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| || || || || |||||||| ||||| Sbjct 179277 AATCGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 179315 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | | ||||| | || || ||||| || || ||||| Sbjct 178668 CTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAA 178727 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||| ||||||| ||| | ||| Sbjct 178728 GATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATCTTCGCCTTCA-CGT 178786 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| || || |||| |||||||| || || || | || | Sbjct 178787 TGTCAATGGTGTCCGAGCTC---TCAACCTCCAGTGTGATGGTCTTACCGGTTAAGGTCT 178843 Query 46578 TAACAAAGATTTGCAT 46593 | ||||| || ||||| Sbjct 178844 TCACAAAAATCTGCAT 178859 >seq442 Length=166222 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||| || | |||| |||||| ||||| |||||||| | | ||| || | Sbjct 81317 ACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTTCGGCC 81258 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || || ||||| |||||||| ||||| | |||||| || | || | | ||||| Sbjct 81257 GTCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGATCCGGAGGAATACCTTCCTT 81198 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCCACCG 46553 |||| ||| || ||| | ||| | || |||||| ||| ||||| |||| | Sbjct 81197 GTCCTGGATTTTAGCCTTCA-CGTTGTCAATAGTGTCGGAGCTC---TCCACTTCCAAAG 81142 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || || |||| ||| || || ||||||||||| Sbjct 81141 TGATGGTCTTTCCGGTCAACGTCTTGACGAAGATTTGCAT 81102 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||||||||| |||| | ||||| | || |||||||||||||||||||| Sbjct 81521 CTCTTTCTGGATATTGTAATCGGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 81462 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | | |||||||||| ||| || ||| | ||| Sbjct 81461 GATCAACCTCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTCA-CGT 81403 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || |||| |||||||| || ||||||| || || | Sbjct 81402 TGTCAATGGTGTCGGAGCTTTCAACCTCCAAAGTGATGGTCTTTCCCGTCAAGGTCTTGA 81343 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 81342 CGAAGATCTGCAT 81330 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | | ||||||||||| || | || |||||| || || ||||| |||| Sbjct 81786 TGCCACCACGGAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGG 81727 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| | || ||||||||||| || ||||| || | ||||||||||| | | Sbjct 81726 CCAATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 81667 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGAT 46540 | | | ||||||||| ||||||| ||| | ||| | | | ||||| |||| Sbjct 81666 GAATACCTTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCAGAGCTC--- 81611 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| ||||| || ||||| || || || || || || |||||||| Sbjct 81610 TCGACCTCCAAGGTGATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | | ||||| | || || |||||||| || ||||| Sbjct 81977 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 81918 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | ||||||||| ||||||| ||| | ||| Sbjct 81917 AATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 81859 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| || || || | ||||| || ||||| || || |||| Sbjct 81858 TGTCAATAGTGTCAGAGCTC---TCGACTTCAAGGGTGATTGTCTTGCCGGTAAGGGTTT 81802 Query 46578 TAACAAAGATTTGCAT 46593 | || || || ||||| Sbjct 81801 TCACGAATATCTGCAT 81786 >seq49 Length=794425 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || | | |||| |||| || || || ||||||||||| || | Sbjct 170696 CCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGATTCTTTCTGGATATTGTAATCTGCA 170755 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||| ||||| || | | ||||||||| | || Sbjct 170756 AGAGTTCGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGCCTCTGCTGGTCCGGAGGA 170815 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||||||||| ||||| ||||| | | | ||||| |||| || Sbjct 170816 ATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTGTCGATAGTGTCCGAGCTC---TCA 170872 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||||||||| || || |||||||||||||| ||||| Sbjct 170873 ACTTCTAGGGTGATGGTTTTGCCTGTAAGGGTTTTAACAAAGATCTGCAT 170922 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||||||| | | |||| || | || |||||||||||||||||| || | Sbjct 170924 CCTCCTCTTAACCTAAGAACCAAGTGAAGGGTTGACTCCTTTTGGATATTGTAATCAGCC 170983 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| || | || |||||||| || ||||| || |||| | ||| || || | || Sbjct 170984 AAAGTACGGCCATCCTCGAGCTGTTTACCGGCAAAGATCAGCCTCTGTTGATCCGGAGGG 171043 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | || || ||| ||||| ||||| | | | || || |||| || Sbjct 171044 ATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCGATGGTATCCGAGCTC---TCA 171100 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||||||||| || || ||||||||||| |||||||| Sbjct 171101 ACTTCTAGGGTGATGGTTTTGCCAGTGAGGGTTTTAACAAAAATTTGCAT 171150 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| |||||||||||||| || | ||||| || | || |||||||| || ||||| || Sbjct 171187 CTCTTTTTGGATATTGTAATCAGCCAGAGTTCGGCCATCCTCGAGCTGTTTACCGGCAAA 171246 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||||||||||| || | | || || ||| |||||| ||||| ||| Sbjct 171247 GATGAGCCTCTGCTGGTCGGGAGGGATTCCTTCTTTATCCTGGATCTTGGCCTTGA-CGT 171305 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| ||| ||| || || | || || || ||||| || || || | Sbjct 171306 TGTCGATGGTGTCCGAGCT---TTCTACCTCGAGGGTTATCGTCTTGCCTGTAAGAGTCT 171362 Query 46578 TAACAAAGATTTGCAT 46593 |||||||||| ||||| Sbjct 171363 TAACAAAGATCTGCAT 171378 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | ||||| |||||| || || || || || ||||| || | Sbjct 170240 CCACCTCTCAGACGGAGCACCAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCTGCA 170299 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || ||||| ||||| |||||||| | | ||||||||| | || Sbjct 170300 AGCGTTCGACCATCCTCTAGCTGTTTGCCAGCGAATATGAGTCTCTGCTGGTCCGGAGGG 170359 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCC 46543 | | |||||||| ||||| ||||| | | | ||||| ||| ||| Sbjct 170360 ATCCCTTCCTTGTCTTGAATCTTTGCCTTGACATTGTCAATAGTGTC---CGAGCTTTCA 170416 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || ||||||||||| || || || || || ||||| ||||| Sbjct 170417 ACTTCCAATGTTATGGTTTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 170466 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || | | |||| |||| || ||| || ||||||||||| || | Sbjct 170468 CCTCCTCTCAACCTAAGAACCAAGTGCAGGGTTGACTCTTTCTGGATATTGTAATCAGCG 170527 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| | || || ||||| ||||| ||||| || | | ||| ||||| | || Sbjct 170528 AGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 170587 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | |||||||| ||||| ||| | | | | | | ||||| |||| || Sbjct 170588 ATCCCTTCCTTGTCTTGAATCTT-AGCTTTAACATTGTCGATTGTGTCTGAGCTC---TC 170643 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||||||||| || || ||||| || ||||| ||||| Sbjct 170644 AACTTCTAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 170694 >seq5102 Length=3010 Score = 82.4 bits (90), Expect = 9e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||| | | ||||| | || |||||||| || || ||||| Sbjct 2734 CTCCTTCTGGATGTTATAGTCAGCCAATGTGCGACCATCCTCGAGCTGTTTTCCAGCGAA 2793 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || ||||||||| ||||||| ||| | ||| Sbjct 2794 GATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 2852 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||| |||| || || || | ||||| || || ||||||| || | Sbjct 2853 TGTCAATGGTGTCGGAGCTC---TCGACTTCAAGTGTGATTGTCTTCCCCGTCAAGGTCT 2909 Query 46578 TAACAAAGATTTGCAT 46593 | || || || ||||| Sbjct 2910 TGACGAAAATCTGCAT 2925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565190580831360