Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq69 217 1e-51 seq146 174 2e-38 seq65 152 5e-32 seq187 145 8e-30 seq49 125 7e-24 seq442 114 1e-20 seq130 109 5e-19 seq70 105 7e-18 seq252 102 8e-17 >seq69 Length=847923 Score = 217 bits (240), Expect = 1e-51 Identities = 383/552 (69%), Gaps = 6/552 (1%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| || || ||||| |||||||| ||||| | || || | |||||| ||| || | Sbjct 357031 GCACGCGAAATCGCAGTGCAAGCCTTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTTAG 356972 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || |||||||| |||||||| || ||||| || || | | ||| || || || ||||| Sbjct 356971 TCCCGGCATGAGCCCGCGTTTCTTCAGCCAGAAAATCGAGCAGAAGCTACCGGAGAAGAA 356912 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || ||| |||||| ||||| || || | ||||| |||| || || | | | | Sbjct 356911 GATGCCTTCGACGCAGGCGAAGGCGACGATACGCTCCGCGAAAGT--CTGGGATCC-GTC 356855 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 |||||| || |||||| | ||||| | |||||| || || |||||||| ||| Sbjct 356854 GATCCACGTCATCGCCCACTGCGCCTTCTTCGCGACGCAAGGGATGGTTTCGATTGCGCG 356795 Query 133134 CAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACAT 133193 |||| | || | |||| | | | ||| ||||||| |||| ||||| Sbjct 356794 AAACAGATGGTCTCTCTCCTTGTTGTCCTTGATGTAAGTGTCGAGGAGGAGACTGTACAT 356735 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCGCGCCTCGACCA 133252 || || || | |||||| || ||||| || || ||||| ||||||| ||||||| | Sbjct 356734 CTCGGAATGGATGTTCTCGATCGCGATCTGGAACCCGTAGAAAGCAC-GCGCCTCCGAGA 356676 Query 133253 CCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 | || || || ||| || | ||||| || ||||| ||||| ||||| Sbjct 356675 CTTGAACATCGGACATGAATCGAGAAGCGAGATTCTCCAGAACGATTCCGTCTGAGGCGG 356616 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGT 133372 |||| ||||| || ||||| |||||||| || |||||| |||||| | |||||||| Sbjct 356615 CGAAGAAGGCGAGGACGTGTTTGATGAAGTGCCGCTCGCCGTCGTTGAGATTCTCCCAGT 356556 Query 133373 CGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTT 133432 |||| ||||| || || || || ||||| | ||||||||||| || ||||| || | Sbjct 356555 CGCGACCGTCCTGAGATAGATCGACTTCCTCCGCCGTCCAAAACGATGCTTCGGCCTTCT 356496 Query 133433 TGTACATACTCC 133444 ||||||| |||| Sbjct 356495 TGTACAT-CTCC 356485 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || |||| || || || || |||| || || | | Sbjct 38434 AATGCAGATTTTCGTGAAGACTCTTGCGGGGAAGACAATAACACTCGAGGTTGAATCATC 38493 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | | | |||| || |||| ||||| || || || ||||||| | | Sbjct 38494 GGACACGATCGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGCAT-CCCGCCGGATC 38552 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | |||||||| || | ||| || ||||| ||||| || | || || ||| |||||||| Sbjct 38553 AGCAGCGGCTGATCTTCGCCGGAAAACAACTGGAAGATGGTCGGACACTCGCCGACTACA 38612 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| |||||| ||||||| |||||||| || | | ||||| ||| Sbjct 38613 ACATCCAGAAGGAATCGACGCTTCATTTGGTCCTTAGGCTTAGAGGAGGC 38662 >seq146 Length=264749 Score = 174 bits (192), Expect = 2e-38 Identities = 379/562 (67%), Gaps = 13/562 (2%) Strand=Plus/Plus Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 ||||| ||||| || ||||| || | ||| ||||| | || || | ||||||| |||| Sbjct 120984 ATCAAACAAGCGAAATCGCAGTGAAGGCCTTCGTCTCGCGAGATCAATTCGTTGGAGAAA 121043 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | || ||||| | || ||||| || ||||| || || | | ||| || || || Sbjct 121044 GTGAGCCCAGGCATTAAACCTCGTTTCTTCAGCCAGAAAATCGAGCAGAAGCTACCGGAG 121103 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| || |||||| ||||||||||| | || || |||| || ||| | Sbjct 121104 AAGAAGATACCTTCGACGCAAGCGAAAGCCACGATACGTTCAGCGAA----GC-TCTGAG 121158 Query 133069 --CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126 | | ||||||| || ||||||| ||| ||| |||||| || || ||||||| Sbjct 121159 ATCCGTCGATCCATTTCATCGCCCATCGCGCCATTTTCGCGACGCAGGGAATGGTTTCGA 121218 Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCG 133186 | ||| || | | | | |||||| | | |||||| |||| ||| Sbjct 121219 TTGCGCGGAAGAGATGATCTCTCTCTTTGTTGTCTTTGATGTAGGTATCGAGAAGGAGAC 121278 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 ||||| || ||||| | ||||| || ||||| || || ||||| ||| || |||| Sbjct 121279 TGTACATCTCGGAGTGAATATTCTCGATCGCGATCTGGAATCCGTAGAAGGCACGAGCCT 121338 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 || || || || || ||| || ||||| || ||||| ||||| Sbjct 121339 CGGAGACTTGAACATCGGACATGAACCGGGAAGATAGATTCTCCAGAACGATTCCGTCAG 121398 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC- 133365 |||||||| || || || |||||||||| ||| || || |||| |||||| || || Sbjct 121399 ATGCGGCGAAGAAAGCGAGGACGTGCTTGACGAAGTGCCGTTCGTCGTCGTT-TAGGGCT 121457 Query 133366 ---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCC 133422 ||||||||||| |||| || || || || || ||| ||||||| || || || Sbjct 121458 TTTTCCCAGTCGCGGTAATCCTGAGATAGATCGACTTCTTCGGCGGTCCAGAAAGAAGCT 121517 Query 133423 TCGGCTTTTTTGTACATACTCC 133444 |||||||| |||||||| |||| Sbjct 121518 TCGGCTTTCTTGTACAT-CTCC 121538 >seq65 Length=625306 Score = 152 bits (168), Expect = 5e-32 Identities = 168/221 (76%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || ||||| ||| | || ||||| | Sbjct 413148 AAAGATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACCATAACCCTTGAGGTCGAATC 413089 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | | |||| | | | | | |||| || |||| ||||| || ||||| ||||||| Sbjct 413088 CTCTGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAAT-CCCGCCGG 413030 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| | |||| |||||| ||||||||||| |||| ||||| ||| ||||| Sbjct 413029 ACCAGCAGCGATTGATTTTCGCGGGGAAACAGCTGGAAGACGGCCGCACGCTCGCCGACT 412970 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||| ||||| ||||||| ||| | ||||| ||| Sbjct 412969 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTGCTCCGT 412929 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| ||||| || ||||| || || |||||| |||| || ||| | | Sbjct 275580 ATGCAAATATTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAGGTGGAGAGCTCT 275639 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||| | || ||||||||||| || | ||||| Sbjct 275640 GACACAATCGATAACG-TCAAGGCCAAAATTCAGGATAAAGAGGGAATCCCTCCGGACCA 275698 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || |||| || || || |||||||| Sbjct 275699 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGACGAACTCTTGCTGACTACAA 275758 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||| || ||||| |||| || ||| | || || Sbjct 275759 CATTCAGAAGGAGTCGACTCTTCATCTAGTTCT 275791 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || ||| | | Sbjct 276264 ATGCAGATTTTCGTGAAGACATTGACCGGTAAGACCATCACTCTGGAGGTTGAGAGCTCG 276323 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||| |||| ||||| || || || || | ||||| Sbjct 276324 GACACGATTGATAACG-TGAAGGCAAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCA 276382 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || |||||||| || || | ||||| | ||||||||| Sbjct 276383 GCAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACATTGGCCGACTACAA 276442 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| || |||||||| || ||| Sbjct 276443 CATCCAGAAGGAGTCGACTCTTCATTTGGTTCTCCGT 276479 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | |||||||| ||||| ||| | || || ||| | | Sbjct 275808 ATGCAGATCTTCGTTAAAACCTTGACGGGCAAGACCATTACCCTGGAGGTGGAGAGCTCG 275867 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| || ||||| | || || Sbjct 275868 GACACCATTGACAACG-TGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGATCA 275926 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||||| || |||| | || | |||||||| Sbjct 275927 GCAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCAGAACATTGGCTGACTACAA 275986 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || || |||||| ||||| Sbjct 275987 CATCCAGAAGGAGTCTACACTTCACTTGGTGTTGCGT 276023 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| || || ||| |||| || ||| | | Sbjct 276036 ATGCAAATCTTCGTGAAGACACTCACTGGCAAGACGATTACCCTCGAGGTGGAGAGCTCT 276095 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || ||||||||||| || | ||||| Sbjct 276096 GACACAATCGATAACG-TGAAGGCCAAGATTCAGGATAAAGAGGGAATCCCTCCGGACCA 276154 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | |||||| | || ||||| Sbjct 276155 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCGGATTACAA 276214 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || || || ||||| || ||| Sbjct 276215 CATTCAGAAGGAGTCTACACTTCACTTGGTTCTCCGT 276251 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || ||||| |||||| | || || || | | Sbjct 275352 ATGCAGATCTTCGTTAAGACTCTCACCGGGAAAACGATCACCCTTGAGGTGGAAAGCTCT 275411 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||||| || |||| || || |||||||| || | || || Sbjct 275412 GACACGATCGACAACG-TTAAAGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGATCA 275470 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||| |||| |||| | || | ||| ||||| Sbjct 275471 GCAGAGGCTAATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGAACATTGGCCGATTACAA 275530 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || || ||||| || Sbjct 275531 CATCCAGAAGGAGTCGACTCTTCACTTGGTCCT 275563 >seq187 Length=227058 Score = 145 bits (160), Expect = 8e-30 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||||||| || ||||| ||||| || ||||| || || |||||| | || |||||| | Sbjct 169909 AAAAATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACAATCACCCTTGAGGTCGAGTC 169850 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||||| | | | | | || | || |||| ||||| || ||||| || | || Sbjct 169849 CTCCGACACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGAATCCCTCCGGA 169790 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| | |||| ||| || || ||||| || |||| ||||||||| |||||| Sbjct 169789 CCAGCAGCGATTGATTTTCGCCGGGAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTA 169730 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| ||||| ||||||| || |||| || ||| Sbjct 169729 CAACATCCAGAAGGAGTCGACGCTTCACCTGGTCCTCCGT 169690 >seq49 Length=794425 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| ||||||||||||||| | || || ||| | | Sbjct 170694 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCA 170635 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||||| || || | ||||| || || || || | |||||| Sbjct 170634 GACACAATCGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAA 170575 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | ||||| | ||| ||||||||||| || || | ||||| ||| || ||||| Sbjct 170574 CAGAGACTCATCTTCGCAGGCAAACAGCTTGAAGATGGCCGCACTCTCGCTGATTACAAT 170515 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || || | || ||||| ||||| || | |||||||| || Sbjct 170514 ATCCAGAAAGAGTCAACCCTGCACTTGGTTCTTAGGTTGAGAGGAGG 170468 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| || || ||||||||||||||| | || || ||| | | Sbjct 170922 ATGCAGATCTTTGTTAAAACCCTTACAGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 170863 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||| || | ||||| || || ||||| | ||||| Sbjct 170862 GACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCAG 170803 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | ||| ||||| ||||| || || | || || || || ||||| Sbjct 170802 CAGAGGCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGAACTCTTGCAGATTACAAT 170743 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| | || ||||| ||||| || | |||||||| || Sbjct 170742 ATCCAGAAAGAATCAACCCTGCACTTGGTTCTTAGGTTGAGAGGAGG 170696 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||||||||| || | || || || | | Sbjct 170466 ATGCAGATCTTCGTCAAGACTCTTACAGGCAAAACCATAACATTGGAAGTTGAAAGCTCG 170407 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | ||| || | ||||| || || || || | ||||| Sbjct 170406 GACACTATTGACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAG 170347 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | ||||| | ||| ||||||||||| || || | || || || || |||||| Sbjct 170346 CAGAGACTCATATTCGCTGGCAAACAGCTAGAGGATGGTCGAACGCTTGCAGATTACAAC 170287 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || || ||| | || ||||||||||||| ||| ||||||| || Sbjct 170286 ATACAGAAAGAATCAACCTTGCATTTGGTGCTCCGTCTGAGAGGTGG 170240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| ||||| ||||||||||||||| | || || ||| | | Sbjct 171150 ATGCAAATTTTTGTTAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 171091 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | || ||||| ||||| || | || ||| Sbjct 171090 GATACCATCGACAATGTCAAGGCTAAGATTCAGGATAAAGAAGGAATCCCTCCGGATCAA 171031 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || || |||||||| || || | || || | || ||||| Sbjct 171030 CAGAGGCTGATCTTTGCCGGTAAACAGCTCGAGGATGGCCGTACTTTGGCTGATTACAAT 170971 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || || ||||| || | || ||||| || Sbjct 170970 ATCCAAAAGGAGTCAACCCTTCACTTGGTTCTTAGGTTAAGAGGAGG 170924 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || || || || |||||||| || | || || ||| | | Sbjct 170238 ATGCAGATATTTGTCAAGACCCTTACCGGTAAAACCATAACATTGGAAGTGGAGAGCTCA 170179 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||||| || || | ||||| || ||||| || | || ||| Sbjct 170178 GACACAATCGACAATGTTAAAGCGAAGATTCAAGACAAGGAAGGAATCCCTCCGGATCAA 170119 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | ||||| | ||| ||||||||||| || || | ||||| || || |||||| Sbjct 170118 CAGAGACTCATCTTCGCCGGCAAACAGCTAGAGGATGGTCGCACTCTTGCTGATTACAAC 170059 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| | ||||| || | ||| ||||| Sbjct 170058 ATACAGAAGGAGTCAACGCTTCACCTTGTGTTGCGT 170023 >seq442 Length=166222 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| ||||| || || ||||| || |||||| | || |||||| | | Sbjct 81786 ATGCAGATATTCGTGAAAACCCTTACCGGCAAGACAATCACCCTTGAAGTCGAGAGCTCT 81845 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| || || || || | ||||| Sbjct 81846 GACACTATTGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCA 81904 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| ||| || || ||||| || || | ||||| | |||||||| Sbjct 81905 GCAGCGTCTCATTTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACATTGGCTGACTACAA 81964 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| |||| || || ||||| || ||| Sbjct 81965 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCTTCGT 82001 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || || |||||| |||| || || | | Sbjct 80646 ATGCAGATCTTCGTTAAGACTCTGACCGGGAAGACTATCACCCTCGAGGTGGAAAGCTCT 80705 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||||| ||||||| || || || || ||||| | || || Sbjct 80706 GACACCATCGACAACG-TTAAAGCCAAAATCCAGGATAAGGAAGGGATTCCTCCGGATCA 80764 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||| |||| |||| || || | ||||||||| Sbjct 80765 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGAACTTTGGCCGACTACAA 80824 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || || ||||| || Sbjct 80825 CATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 80857 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || || || |||||| |||| || ||| | || Sbjct 80874 ATGCAGATCTTCGTCAAAACCCTAACAGGAAAGACGATCACCCTCGAGGTGGAGAGCTCC 80933 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || ||||| | ||||| Sbjct 80934 GACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCA 80992 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| || || || || || |||| || || || |||||||| Sbjct 80993 GCAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGGACTCTTGCTGACTACAA 81052 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || ||| | ||||| Sbjct 81053 CATCCAGAAGGAGTCGACCCTTCATCTCGTGCT 81085 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||| | || || || |||||||| | || || ||| | || Sbjct 81102 ATGCAAATCTTCGTCAAGACGTTGACCGGAAAGACCATCACTTTGGAAGTGGAGAGCTCC 81161 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | ||||||| ||||| || || ||||| | || || Sbjct 81162 GACACTATTGACAACG-TGAAGGCTAAAATCCAGGACAAGGAAGGTATTCCTCCGGATCA 81220 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | | || | ||| || || || || || |||| || || | |||||||| Sbjct 81221 GCAGAGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGCCGAACTTTGGCTGACTACAA 81280 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || || ||||| ||||| Sbjct 81281 CATCCAGAAGGAGTCTACACTTCACTTGGTCTTGCGT 81317 >seq130 Length=298546 Score = 109 bits (120), Expect = 5e-19 Identities = 160/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 38237 TaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGA 38296 ||||| | ||| || |||||||| || | || || || ||||||||| | || || || Sbjct 143590 TAAAATCAAGCAGATTTTCGTAAAGACTTTGACAGGGAAGACCATCACCTTAGAAGTGGA 143531 Query 38297 GGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCG 38355 | | | |||| | | | |||| | || | || |||| || |||||||| ||||| Sbjct 143530 AGACTCGGACACCATCGATAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGTATTCCGC 143472 Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 | ||||| ||| |||| || | ||| ||||||||||| || || | ||||| | || Sbjct 143471 CGGACCAGCAGAGGCTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACATTGGGCG 143412 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | ||||||||| | ||||| |||| | || ||||| |||||| Sbjct 143411 ATTACAACATCAAGAAGGACTCGACCATTCACTTGGTACTGCGT 143368 >seq70 Length=414679 Score = 105 bits (116), Expect = 7e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || || || ||| | || || || | Sbjct 19550 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATC 19491 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | || | | | | | || | || |||| ||||| || || || ||||||| Sbjct 19490 GTCGGATACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGGAT-CCCGCCGG 19432 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 | || ||||| || || | ||| || || |||||||| |||| | || ||| |||| Sbjct 19431 ATCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACTCTCGCGGACT 19372 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||||| ||||||| || ||||| || ||| ||||||| || Sbjct 19371 ACAACATCCAGAAGGAGTCGACGCTTCACTTGGTTCTCCGTCTGAGAGGAGG 19320 >seq252 Length=291119 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || || |||||| |||| || ||| | Sbjct 179999 ATGCAGATCTTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAGGTGGAGAGTTCT 179940 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| ||||| ||||| || || | ||||| Sbjct 179939 GACACCATCGACAACG-TCAAGGCTAAAATCCAAGACAAGGAGGGGATCCCACCAGACCA 179881 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || |||| || | ||| || || || || || |||| || || || |||||||| Sbjct 179880 GCAAAGGCTGATCTTCGCCGGGAAGCAACTCGAGGACGGACGAACTCTTGCTGACTACAA 179821 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| |||| || ||| | ||||| Sbjct 179820 CATCCAGAAGGAGTCGACTCTTCATCTAGTGCT 179788 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || |||||| |||| || || | Sbjct 180227 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGTTCT 180168 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||||| || |||| || || |||||||| || | || || Sbjct 180167 GACACGATCGACAACG-TTAAAGCCAAGATCCAGGATAAGGAGGGAATCCCACCGGATCA 180109 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | ||| || || ||| |||| |||| || || || ||| ||||| Sbjct 180108 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTTGCCGATTACAA 180049 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| |||||| | || || ||| |||| || Sbjct 180048 CATCCAGAAGGAATCTACTCTCCATCTGGTTCT 180016 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || |||||||| | || || ||| | | Sbjct 178859 ATGCAGATTTTTGTGAAGACCTTAACCGGTAAGACCATCACACTGGAGGTTGAGAGCTCG 178800 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || || || | ||||| Sbjct 178799 GACACCATTGACAACG-TGAAGGCGAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCA 178741 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || |||||||| || || | ||||| | |||||||| Sbjct 178740 GCAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACATTGGCTGACTACAA 178681 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| |||| || || ||||| || ||| Sbjct 178680 CATCCAAAAGGAGTCGACTCTTCACTTGGTTCTCCGT 178644 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || ||||| || ||||| | || || ||| | | Sbjct 179543 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAGACGATCACATTGGAGGTGGAGAGCTCG 179484 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||| |||| ||||| || || ||||| | || || Sbjct 179483 GACACGATTGACAACG-TGAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCA 179425 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || | || | ||| || || ||||| || |||| | || | ||||||||| Sbjct 179424 GCAAAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACATTGGCCGACTACAA 179365 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || || || |||||| ||||| Sbjct 179364 CATTCAGAAGGAGTCTACACTTCACTTGGTGTTGCGT 179328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500130485381120