Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq636 197 1e-44 seq114 176 3e-38 seq49 136 3e-26 seq59 134 1e-25 seq830 111 1e-18 seq126 105 5e-17 seq67 98.7 8e-15 seq1 96.9 3e-14 seq2 89.7 4e-12 seq18 87.8 1e-11 >seq636 Length=102301 Score = 197 bits (218), Expect = 1e-44 Identities = 685/1052 (65%), Gaps = 20/1052 (2%) Strand=Plus/Minus Query 517257 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 517316 |||| | ||||| || ||||| || ||||| | || || ||| || ||||||| Sbjct 61728 CGGCGGAGACATTGAGGATACCGTTTGCATCAATGTCGAAACAGACCGTGATCTGAGGGA 61669 Query 517317 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 517376 | || | |||| || ||||| || | | || |||||| | || || |||| Sbjct 61668 CGCCACGTGGAGCCGGAGGGATACCGGAGAGCTCGAACTTTCCCAAAAGGTTGTTGTCTT 61609 Query 517377 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 517436 | || | || ||||| ||| | | |||||| ||| | | |||||| || || | Sbjct 61608 TGGTTCTTGCTCTCTCACCTTCGTACACTTGGATCAAAACACCTGGTTGATTGTCAGAGT 61549 Query 517437 AAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 517495 |||| | || || ||| || || || || |||||||| || | || | | || Sbjct 61548 AAGTAGAGAAGAC-CTGTTCCTTCTTGGTCGGTATCGTTGTGTTCCTCTGTATCAAAGTG 61490 Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||||| |||||||||||||| | ||| ||||| ||||| |||||||||| | || | Sbjct 61489 GTCATAACTCCACCTGCTGTTTCAAGACCGAGAGAGAGAGGTGTGACATCAAGCAAGAGA 61430 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | | ||| | || || | || |||| ||||| || || |||| || ||||| Sbjct 61429 AGGTCTTGCACCTTCTCGTTCCCTTCACCAGTCAGAATCGCGGCCTGAACCGCTGCACCG 61370 Query 517616 TATGCAACAGCTTCATCAGGATTAACAG--TTTCATTTAGTTTTTTACCATTGAAAAAAT 517673 || || || || || || || |||| || || || || | |||||||||||| |||| Sbjct 61369 TAAGCCACGGCCTCGTCGGGGTTAATAGACTTGCAG--AGCTCTTTACCATTGAAGAAAT 61312 Query 517674 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 517733 | ||||| || || ||||| ||||| | || || ||||| | |||| |||| Sbjct 61311 CTTGTAGAAGCTGCTGAACTTTAGGGATACGCGTAGAACCACCAACAAGAACAACATCAT 61252 Query 517734 GCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCC 517792 | ||| ||| | || |||| ||| | ||| | | || ||||| || || | || | Sbjct 61251 GAACC-GTGCTCTTGTCCATTTTAGCATCACGGAGACACTTCTCAACAGGCTCCATACAC 61193 Query 517793 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 517852 |||||| | || ||| || || ||| | || | ||| | | || | || || Sbjct 61192 TTTCTAAAGAGATCCATGTTAAGCTCCTCAAATCTTGCGCGAGTGATCG-GAGAATAAAA 61134 Query 517853 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 || |||||||| || | ||| |||| ||||| || ||||| | | || || || | Sbjct 61133 GTCGATTCCTTCAAAGAGAGAGTCAATCTCAATAGTGGTTTGCGCGGTGGATGAAAGAGT 61074 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCT-TTTGCTGATTGATTC 517969 || || || | ||||| || || || | | || |||| ||| | | | | | | Sbjct 61073 CCGCTTTGCTCTCTCACAAGCCGTTCTCA-ACCTCCTAAGAGCTCTCGGGTTACCG-CTA 61016 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029 | ||| | || | || ||||| || |||| |||| | | || | | || ||| Sbjct 61015 ATATCCTTCTTGTTCTTCCTCTTAAACTCTTGAACAAAGTGATTAACCATTCTGTTGTCA 60956 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 || || ||||| || | | ||| | ||| | |||| | |||| || | || ||| Sbjct 60955 AAGTCCTCACCACCAAGATGAGTGTCTCCAGCAGTAGACTTCACTTCAAAGATACCTTCT 60896 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 || | | | ||||| ||||| || |||||||| | |||||| || | || ||| Sbjct 60895 TCGATGGTGAGAAGAGAGACATCGAAAGTACCACCACCAAGATCAAAGATCAAAACGTTC 60836 Query 518150 ATTTCT----TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 | ||| || | | || |||||||| || || || | || || || ||||| Sbjct 60835 TTCTCTCCAACGCTCGTCGCCTTCTTATCAAGGCCGTAAGCGATGGCTGCTGCGGTTGGC 60776 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 || || || || | |||||| || | ||||| || || || || || |||||||| Sbjct 60775 TCGTTGATGATACGCAAAACGTTCAAGCCAGCGATCACACCGGCGTCCTTTGTGGCTTGA 60716 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 | || || ||||| || || ||||||||||| Sbjct 60715 CGCTGAGAGTCGTTGAAGTAAGCAGGAACAGT 60684 >seq114 Length=758912 Score = 176 bits (194), Expect = 3e-38 Identities = 557/851 (65%), Gaps = 18/851 (2%) Strand=Plus/Plus Query 517466 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCA 517525 || || || |||||||| | || | | ||||||| | |||||| || ||||| | |||| Sbjct 380499 GGGATCGTCGTGTTTCTCTGGATCAAAGTGGTCATGACACCACCAGCGGTTTCAAGACCA 380558 Query 517526 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 517585 || || ||||| |||||||||| | || || | ||||| ||| || | || ||| Sbjct 380559 AGGGAGAGAGGCGTGACATCAAGCAAGAGAAGGTCTTGAACTTTCTCGTTTCCTTCACCG 380618 Query 517586 ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG-- 517643 ||||| || || |||| || ||||||||||| ||||| ||||| || || | || Sbjct 380619 CTTAGAATCGCAGCCTGAACGGCTGCACCATATGCCACAGCCTCATCGGGGTTGATAGAC 380678 Query 517644 TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATAC 517703 || || || | || || ||||| || | | || | ||| ||||| || |||| Sbjct 380679 TTGCA--GAGCTCCTTGCCGTTGAAGAAGTCTTGGAGCAATTGCTGAACCTTGGGGATAC 380736 Query 517704 GAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCC 517762 ||| || || || || | |||| ||||||| ||||| | || |||| || | ||| Sbjct 380737 GAGTAGAACCACCGACAAGGACAACATCATGCA-CTGTGCTCTTGTCCATCTTGGCATCA 380795 Query 517763 AATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCG 517822 | | || || || || || | || | ||| || | || ||| || ||| Sbjct 380796 CGGAGACACTTCTCGACAGGCTCCATACACTTTCTGAAGAGATCCATGTTAAGCTCCTCG 380855 Query 517823 AATTTAGCTCTAGTAAGAGTGACATTA-TAATCAATTCCTTCGAACAAAGAATCAACTTC 517881 ||| |||| | || | | || | || ||||||||||||| |||| ||| |||| || Sbjct 380856 AATCTAGCGCGGGTGATTG-GAGAATAGAAATCAATTCCTTCAAACAGAGAGTCAATCTC 380914 Query 517882 AATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAG 517941 || || || |||| | ||||| || | | || || | || || ||||| || | Sbjct 380915 GATGGTGGTCTGAGCGGTGGAAGAAAGAGTCCTCTTTGCTCTCTCGCAAGCTGTTCTCA- 380973 Query 517942 TCTTCGTAAG-GCT-TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 517999 | || |||| ||| | | | | | | | ||| | || | || ||||| || ||| Sbjct 380974 ACCTCCTAAGAGCTCTCGGGTTACCG-CTAATATCCTTCTTGTTCTTCCTCTTAAACTCT 381032 Query 518000 TCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCT 518059 | ||| | | || | | || || ||||||||||| || | | |||| ||| Sbjct 381033 TGCACAAAGTGGTTAACCATTCTGTTGTCGAAATCTTCACCACCAAGATGGGTATCTCCG 381092 Query 518060 GACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTT 518119 | || | | |||| ||| | || ||||||| | | ||| | || || || Sbjct 381093 GCTGTTGACTTCACTTCGAAGATACCTTCTTCAATGGTGAGAAGGGAGACGTCGAAAGTA 381152 Query 518120 CCACCACCCATATCAAAAATAAGTACATTCATTTCT------TTGTCTTGGTTTTTATCA 518173 |||||||| | |||||| || | || ||| | ||| || | || || ||| Sbjct 381153 CCACCACCAAGATCAAAGATCAAGACGTTCTTCTCTCCAACGCTGGTTGCCTTCTTGTCA 381212 Query 518174 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 518233 ||||| || || | ||| || || || || || || || || | |||||| || | ||| Sbjct 381213 AGACCGTAGGCGATAGCTGCTGCGGTCGGCTCGTTGATGATACGCAAAACGTTCAAGCCA 381272 Query 518234 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 518293 ||||| ||| || || || |||||||| | || || ||||| || || |||||||| Sbjct 381273 GCAATAACTCCGGCGTCCTTTGTGGCTTGACGCTGAGAGTCGTTGAAGTAAGCAGGAACG 381332 Query 518294 GTAATAACGGC 518304 || | |||||| Sbjct 381333 GTGACAACGGC 381343 Score = 122 bits (134), Expect = 7e-22 Identities = 545/852 (64%), Gaps = 20/852 (2%) Strand=Plus/Plus Query 517466 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCA 517525 || || |||||||| || || | | ||||||| | |||||| ||||| || | ||| Sbjct 384137 GGGATGGTTGTGTTCCTGGGGATCAAAGTGGTCATGACACCACCGGCTGTCTCAAGACCG 384196 Query 517526 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 517585 ||||| |||||||||||||| | | | || || ||| | || || | || ||| Sbjct 384197 AGAGAGAGAGGAGTGACATCGAGCAACAGAAGATCTTGGACCTTCTCGTTTCCTTCACCG 384256 Query 517586 ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG-- 517643 || ||||| | || | |||||||| || ||||| || || || || || | | Sbjct 384257 CTGAGGATAGCGCCCTGGACGGCAGCACCGTAAGCAACGGCCTCGTCGGGGTTGATGGAC 384316 Query 517644 TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATAC 517703 || || || | || || ||||| || | ||| | ||| |||||||| |||| Sbjct 384317 TTGCAG--AGCTCCTTTCCGTTGAAGAAGTCCTGAAGCAATTGCTGAACCTTAGGGATAC 384374 Query 517704 GAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCC 517762 | | || || ||||| | || | || || || ||| | || |||| || | ||| Sbjct 384375 GGGTGGAACCACCAACAAGGACGACATCGTGGACG-GTGCTCTTGTCCATCTTAGCATCA 384433 Query 517763 AATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCG 517822 | | || || || || || | || | || || | ||| || || ||| Sbjct 384434 CGGAGACACTTCTCGACTGGCTCCATACACTTCCTGAAGAGGTCCATGTTGAGCTCCTCG 384493 Query 517823 AATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTC 517881 ||| |||| | || | ||| | || || ||||| || ||| | | ||| |||| || Sbjct 384494 AATCTAGCGCGTGTGATGGTGG-AGTAGAAGTCAATACCCTCGTAGAGAGAGTCAATCTC 384552 Query 517882 AATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAG 517941 || || || |||| | || || || | | || || | || || | || || | Sbjct 384553 GATGGTTGTCTGAGCGGTGGAGGAAAGGGTCCTCTTTGCTCTCTCGCAGGAAGTTCTCAA 384612 Query 517942 TCTTCGTAAG-GCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATC 517998 || | |||| ||| ||| | || | | | || | || || |||||||| || Sbjct 384613 CCTCC-TAAGAGCTCTTG--GGTTACCAGTGATGTCCTTCTTGCTCTTCCTCTTGAATTC 384669 Query 517999 TTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCC 518058 || |||| | | || | | || || |||||||||||||| | | || | || Sbjct 384670 TTGAACAAAGTGGTTAACCATTCTGTTGTCGAAATCTTCACCTCCAAGATGGGTGTCACC 384729 Query 518059 TGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGT 518118 | || || | |||| ||| | || || |||| | | ||| | ||||| ||| Sbjct 384730 GGCTGTCGCCTTAACTTCGAAGATACCTTCCTCAATGGTGAGAAGGGAGACATCGAAGGT 384789 Query 518119 TCCACCACCCATATCAAAAATAAGTACATTCATTTCT------TTGTCTTGGTTTTTATC 518172 |||||||| | ||| || || || || ||| | ||| || | ||||| || Sbjct 384790 ACCACCACCAAGATCGAAGATCAGCACGTTCTTCTCTCCAACGCTGGTTGCCTTTTTGTC 384849 Query 518173 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 518232 |||||| || |||| ||| || || || || || || ||||| | || ||| || | ||| Sbjct 384850 AAGACCGTAGGCAATAGCTGCTGCGGTGGGCTCGTTGATAATACGCATAACGTTCAAACC 384909 Query 518233 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 518292 |||||| ||| ||||| || || ||||| | || || ||||| || || |||||||| Sbjct 384910 AGCAATAACTCCAGCATCCTTTGTAGCTTGACGCTGAGAGTCGTTGAAGTAAGCAGGAAC 384969 Query 518293 AGTAATAACGGC 518304 || | |||||| Sbjct 384970 GGTGACAACGGC 384981 >seq49 Length=794425 Score = 136 bits (150), Expect = 3e-26 Identities = 730/1147 (64%), Gaps = 22/1147 (2%) Strand=Plus/Plus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 |||||| || |||||||||||| | || | || |||||||| | || || || Sbjct 54074 GCTTCTTGAACCATTCTCTCAATCTCGTCCTTTGACAATCTTCCCTTGTCGTTTGTGATT 54133 Query 517223 GTAATATTCTTGGATTTGTT-TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 || || || || ||||| ||||| || || |||| | || || || ||||| || Sbjct 54134 GTGATCTTGTTCT-TTTGTCCTGTTGTCTTGTCCTCGGCCGAGACGTTGAGGATACCGTT 54192 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 || || | || || |||| || ||||| || ||||| |||| || ||||| || Sbjct 54193 TGCGTCAATGTCGAAACAGACTGTGATCTGAGGAACACCTCTGGGAGCTGGAGGGATACC 54252 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 | | || |||||| | || || ||||| || | | || || ||| | Sbjct 54253 AGAAAGCTCGAACTTTCCCAAAAGGTTGTTGTCTTTGGTCCTTGCCCTCTCGCCTTCGTA 54312 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 517461 | |||||| || | | ||| || ||||| ||||||| || || ||| || | Sbjct 54313 GACTTGGATCAAGACGCCTGGTTGGTTGTCTGAGTAAGTTGAGAAGAC-CTGTTCCTTCT 54371 Query 517462 ACAAGGA-ATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | || || || ||||| || | || | | ||||| | || || || ||||| | Sbjct 54372 TCGTGGGGATGGTCGTGTTCCTTTGGATCAAAACAGTCATGACTCCTCCGGCGGTTTCAA 54431 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 517580 |||||||||||| || ||||| || | | || | || ||||| || || | | | Sbjct 54432 GACCAAGAGAAAGTGGCGTGACGTCGAGCAAGAGGAGATCTTGAACCTTCTCGTTACCCT 54491 Query 517581 GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 517640 ||| ||||||||||| |||| ||||||||| || ||||| |||||||| || || | Sbjct 54492 CACCGCTGAGAATAGCTGCCTGAACAGCAGCACCGTAGGCAACGGCTTCATCGGGGTTGA 54551 Query 517641 CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAA 517700 | || || | ||| || ||||| || | || | || ||||| || | Sbjct 54552 TGGATTTGCAAAGCTCTTTGCCGTTGAAGAAGTCGAGGAGCAACTGCTGGACCTTGGGGA 54611 Query 517701 TACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG-ATTTATCCAGTTTTGAA 517759 |||| | ||| || || || || |||| || | | ||| | ||| |||| || | | Sbjct 54612 TACGTGTTGAGCCACCGACCAAGACAACATCGT-CGACTGAGCTTTTGTCCATCTTGGCA 54670 Query 517760 TCCAATAAAAC-TTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTC 517818 | || || || || ||||| || || | || ||| || | || || || Sbjct 54671 T-CACGAAGACACTTCTCAACAGGCTCCATACATTTTCTGAAGAGATCCATGTTGAGCTC 54729 Query 517819 TTCGAATTTAGCTCTAGTAAGAGTGACATTA-TAATCAATTCCTTCGAACAAAGAATCAA 517877 || ||| | || | || | | || | || ||||||| || ||| ||| ||| || | Sbjct 54730 CTCAAATCTTGCACGGGTGATTG-GAGAGTAGAAATCAATACCCTCGTACAGAGAGTCGA 54788 Query 517878 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCC 517937 |||||| || || |||| | ||| || || | | || || | ||||| || || | Sbjct 54789 TTTCAATGGTGGTCTGAGCTGTAGAGGAGAGAGTCCTCTTCGCTCTCTCACAGGCGGTTC 54848 Query 517938 TTAGTCTTCGTAAG-GCTTTTGCTGATTGATTCAAA--TCTGTTTTATATTTTCTCTTGA 517994 | | | || |||| ||| | | | || | || || | || | || ||||||| Sbjct 54849 TCA-ACCTCCTAAGAGCTCT--CGGGTTTCCGCTAATGTCCTTCTTGTTCTTCCTCTTGA 54905 Query 517995 AATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTAT 518054 | || | ||| | | || | | || || ||||| ||||| || | | ||| | Sbjct 54906 ACTCCTGGACAAAGTGGTTCACCATTCTGTTGTCGAAATCCTCACCACCGAGATGAGTGT 54965 Query 518055 TTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCAT 518114 ||||| || || | || | || | || ||||||| | | ||||| |||||| Sbjct 54966 CTCCTGCAGTCGCCTTCACCTCAAAGATACCTTCTTCAATGGTGAGAAGAGAGACATCAA 55025 Query 518115 GGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTTTGTCTTG----GTTTT 518168 || |||||||| | ||||| || | ||| ||| | | | |||| || | Sbjct 55026 AAGTACCACCACCAAGGTCAAAGATCAATACGTTCTTCTCCCCAACGCTTGTAGCCTTCT 55085 Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 | || |||||||| |||| ||||| || || || || || || || | || || || | Sbjct 55086 TGTCTAGACCATAAGCAATGGCAGCTGCCGTAGGCTCGTTGATGATACGCATTACGTTCA 55145 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 ||||||||| ||| || || || || || || | || || ||||| || || || | Sbjct 55146 AACCAGCAATGACTCCGGCGTCCTTCGTTGCCTGACGCTGAGAGTCGTTGAAGTAGGCTG 55205 Query 518289 GAACAGT 518295 ||||||| Sbjct 55206 GAACAGT 55212 >seq59 Length=439719 Score = 134 bits (148), Expect = 1e-25 Identities = 545/845 (64%), Gaps = 24/845 (3%) Strand=Plus/Plus Query 517466 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCA 517525 ||||| || ||||| || ||| | |||||||| |||||| || ||||| ||||| Sbjct 252429 GGAATCGTGGTGTTCCTCGGAATCAGGACGGTCATAACACCACCGGCGGTTTCCAAACCC 252488 Query 517526 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 517585 | || | ||||||||||||| || | | || ||| | || || | || ||| Sbjct 252489 AAGGACAAGGGAGTGACATCAAGGAGTAACAAATCTTGGACCTTCTCGTTCCCTTCACCG 252548 Query 517586 A-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGT 517644 ||||| | || ||||||| ||| || ||||| ||||||||||||||||| |||| | Sbjct 252549 CTCAAGA-TCGCAGCTTGAACAGCTGCTCCATAGGCAACAGCTTCATCAGGGTTAATGCT 252607 Query 517645 TTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATAC 517703 || | || | ||| || ||||| || | ||| || ||| || || || || || | Sbjct 252608 TTTACAGAGCTCTTTCCCGTTGAAGAAGTCTTGCAA-AAGCTGCTGCACTTTGGGGATTC 252666 Query 517704 GAGATGATCCTCCAACTAATACAATTTCATG--CACCTGTGATTTATCCAGTTTTGAATC 517761 | || || ||||| | |||| ||||| |||| | || |||| || | ||| Sbjct 252667 TTGTGGAGCCACCAACGAGGACAACATCATGGACACCGCT--CTTGTCCATCTTAGCATC 252724 Query 517762 CAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTC 517821 ||| || || ||||| || | || | || || | || ||||| || Sbjct 252725 TCTCAAACACTTCTCCACGGGCTCCATACACTTCCTGAAAAGATCCATGTTGAGTTCCTC 252784 Query 517822 GAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTC 517881 |||| | || | ||| | || || |||| || || ||| | | || || | || Sbjct 252785 GAATCTGGCACGAGTGATGGTCGTATAGAAATCGATGCCCTCGTAGAGGGAGTCGATCTC 252844 Query 517882 AATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAG 517941 || || || |||| | ||||| || | | || || | || || |||||||| || Sbjct 252845 TATTGTCGTCTGAGCGGTCGAAGAAAGGGTCCTCTTCGCCCTCTCGCAAGCTGTCCTCAG 252904 Query 517942 TCTTCGTAAGGCTTTTGCTGATT--GATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 517999 || | |||||| ||| | || | | | ||| | || | |||||||| || || Sbjct 252905 CCTCCTCAAGGCTCTTG--GGTTCCCAGTGATATCCTTCTTGTGCTTTCTCTTAAACTCC 252962 Query 518000 TCAAC-ACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCC 518058 | ||| | | || | || | | || |||||||| ||||| || | | || | || Sbjct 252963 TGAACGAAATGAT-TCACCATCCTGTTGTCAAAATCCTCACCACCGAGATGCGTGTCACC 253021 Query 518059 TGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGT 518118 | ||| || | |||| || | || || |||| | | |||| ||||| || Sbjct 253022 AGCCGTGGCCTTCACTTCAAAGATACCTTCCTCAATCGTAAGCAGAGACACATCGAATGT 253081 Query 518119 TCCACCACCCATATCAAAAATAAGTACATTCATTTC-------TTTGTCTTGGTTT-TTA 518170 ||||| |||| ||| || || || || ||| | || | | | | ||| || Sbjct 253082 ACCACCGCCCAAATCGAAGATGAGAACGTTCTTCTCGCCAACACTAGAC--GCTTTCTTG 253139 Query 518171 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 518230 || ||||| ||||||| ||||| || ||||| || || || || | || || || ||| Sbjct 253140 TCTAGACCGTACGCAATCGCAGCCGCGGTTGGCTCGTTGATGATACGCATCACGTTGAGA 253199 Query 518231 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 518290 |||| || ||| |||||||| || || || | || |||||||| || || ||||| Sbjct 253200 CCAGAGATGACTCCGGCATCTTTTGTCGCCTGACGCTGAGAATCGTTGAAGTAAGCAGGC 253259 Query 518291 ACAGT 518295 || || Sbjct 253260 ACTGT 253264 >seq830 Length=118371 Score = 111 bits (122), Expect = 1e-18 Identities = 662/1052 (63%), Gaps = 18/1052 (2%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || || || ||||| || || || | ||||| ||| || || || || ||||| Sbjct 91460 ACGTTGAGGATACCGTTCGCGTCAATGTCAAAACAGACGGTGATCTGGGGAACACCTCTT 91519 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 | ||||| ||||| || | | ||| | |||| | || || ||||| || | Sbjct 91520 GGGGCAGGAGGGATACCAGAGAGCTCGAATTTACCCAAAAGGTTGTTGTCTTTGGTTCTT 91579 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 || || || ||| | | |||||| ||| | | ||| || ||||| ||||| | Sbjct 91580 GCTCTCTCTCCTTCGTAGACTTGGATCAAGACTCCTGGTTGGTTGTCTGAGTAAGTCGAG 91639 Query 517445 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504 || ||| || || || || ||||||||||| | || | |||||| | Sbjct 91640 AAGACTTGTTCCTTCTTTGTCGGGATGGTTGTGTTTCTTTGGATCAAGACGGTCATGACT 91699 Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 || || || ||||| | ||| ||||| || || || || |||| | | || || |||| Sbjct 91700 CCTCCAGCAGTTTCAAGACCGAGAGAGAGTGGTGTCACGTCAAGCAATAGAAGATCTTGA 91759 Query 517565 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 517624 | || || | | | ||| ||||||||||| |||| ||| ||||| || || || Sbjct 91760 ACCTTCTCGTTACCCTCACCGCTGAGAATAGCTGCCTGAACAGCTGCACCGTACGCCACG 91819 Query 517625 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 517684 |||||||| || |||| || || || | |||||| ||||| || | || ||| Sbjct 91820 GCTTCATCGGGGTTAATAGATTTGCAGAGCTCTTTACCGTTGAAGAAGTCGAGGAGTAGT 91879 Query 517685 TGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 517744 || ||||| || ||||| | || || || |||| |||| || | | | | | | Sbjct 91880 TGCTGGACCTTGGGGATACGGGTGGAGCCACCGACTAGGACAACGTCGT-CGACGGAGCT 91938 Query 517745 -TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAA 517803 || |||| || | ||| | | || ||||| || || | || | ||| || | Sbjct 91939 CTTGTCCATCTTAGCATCACGGAGACACTTCTCAACAGGCTCCATACACTTTCTGAAAAG 91998 Query 517804 GTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCC 517860 || || | || || ||||| |||| | || | | || | || || || ||||| Sbjct 91999 ATCCATGTTC--AGCTCCTCGAACCTAGCGCGGGTGATTG-GAGAGTAGAAGTCGATTCC 92055 Query 517861 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 517920 ||| |||| ||| |||| || || || ||||| | | ||||| || | | || || Sbjct 92056 TTCAAACAGAGAGTCAATCTCGATGGTGGTTTGTGCGGTGGAAGAAAGAGTCCTCTTTGC 92115 Query 517921 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTT 517978 | ||||| || || || | || | || ||| | | | || | || || | Sbjct 92116 TCTCTCACAAGCGGTTCTCAACCTCCTTAGAGCTCT--CGGGTTTCCGCTAATGTCCTTC 92173 Query 517979 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 518038 || | || |||||||| |||| ||| | | || | | || || ||||| ||| Sbjct 92174 TTGTTCTTCCTCTTGAACTCTTGCACAAAGTGGTTCACCATCCTGTTGTCGAAATCCTCA 92233 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098 || || | | ||| | ||||| || ||| | |||| || | || || |||| | Sbjct 92234 CCACCGAGATGAGTGTCTCCTGCAGTGGCTTTAACTTCAAAGATACCTTCCTCAATGGTT 92293 Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTT 518156 | ||||| ||||| || |||||||| | ||||| || | || ||| | | | Sbjct 92294 AGAAGAGAGACATCGAATGTACCACCACCAAGGTCAAAGATCAAAACGTTCTTCTCCCCA 92353 Query 518157 TGTCTTG----GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 518212 || | || || || || ||||| || | || || || || || || || || Sbjct 92354 ACACTAGTAGCCTTCTTGTCTAGCCCATAGGCGATGGCTGCTGCTGTAGGCTCGTTGATG 92413 Query 518213 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 518272 || | || ||| || | ||||| || || || || || |||||||| | || || Sbjct 92414 ATACGCATAACGTTCAAGCCAGCGATCACACCAGCGTCCTTTGTGGCTTGACGCTGAGAG 92473 Query 518273 TCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 ||||| || || || || ||||| | ||||| Sbjct 92474 TCGTTGAAGTAAGCCGGGACAGTGACGACGGC 92505 >seq126 Length=290673 Score = 105 bits (116), Expect = 5e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| | ||||| ||||| ||||| || || || || ||| |||| |||||| || Sbjct 54696 CCATATGATAAAGCGGCAGCTGTTGGCTCGTTGATGATCCTCTGGACATCAAGACCGGCG 54755 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| | || ||||| || ||||||||||| || | |||||| ||||| |||||||| ||| Sbjct 54756 ATTTTCCCAGCATCCTTGGTGGCTTGTCTCTGCGCATCGTTGAAATAAGCAGGAACTGTA 54815 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 | ||| || | || | || || | |||||| || |||| ||||||||| Sbjct 54816 ACAACAGCTTTTGTGATGGTCTTCCCGAGATAAGCCTCAGCGGTTTCTTTCATTTT 54871 >seq67 Length=425973 Score = 98.7 bits (108), Expect = 8e-15 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| || |||||||| | ||||| | ||| | ||| | || | | | | Sbjct 338397 ACATCAAACGTACCACCACCAAGGTCAAAGACAAGGATGTTCTTCTCACCGCCCT---TC 338341 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || |||||||| || |||| |||||||||||| ||||| || |||||||| |||||| Sbjct 338340 TTGTCAAGACCGTAGGCAATAGCAGCAGCAGTGGGTTCGTTGATAATTCTAGCAACATTG 338281 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 || ||||| || || ||||| || |||||||| || || | |||||| || || || Sbjct 338280 AGGCCAGCGATAACACCAGCATCCTTTGTGGCTTGCCTCTGGGCATCGTTGAAGTAAGCT 338221 Query 518288 GGAAC 518292 | ||| Sbjct 338220 GCAAC 338216 >seq1 Length=1953584 Score = 96.9 bits (106), Expect = 3e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| | || ||||||||| || || || || ||||| ||| || | ||||||||| Sbjct 1259811 CCATAGGAAAGAGCAGCAGCTGTAGGCTCGTTTATAATCCTCTCGACTTCAAGACCAGCG 1259752 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || || ||||||||||| ||||| || || | |||||| || || ||||| ||||| Sbjct 1259751 ATCCTACCAGCATCTTTAGTTGCTTGCCTCTGAGCATCGTTGAAGTAAGCAGGGACAGTG 1259692 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 | || || | | ||| ||| |||| ||||| || || | |||||| || Sbjct 1259691 ACGACAGCTTTCTTGACTGATTTTCCAAGGTAAGCTTCGGCTGTCTCTTTCATCTT 1259636 >seq2 Length=2373158 Score = 89.7 bits (98), Expect = 4e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 518186 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 518245 || |||||||| || ||||| || || || ||| |||| |||||| || ||| | || Sbjct 972474 AACGCAGCAGCGGTAGGTTCGTTGATGATCCTCTGGACATCAAGACCGGCGATTTTCCCG 972533 Query 518246 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297 ||||| || ||||||||||| || | ||| || ||||| || |||||||||| Sbjct 972534 GCATCCTTTGTGGCTTGTCTCTGCGCATCATTGAAATAAGCTGGAACAGTAA 972585 Score = 86.0 bits (94), Expect = 5e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 668858 AAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGTACA 668917 || |||||| | || || |||||||||||||||||||| || ||| | || |||||||| Sbjct 17513 AAGGAAGGTAGAATCAGGGGAAATTTGATGGGAAAACGAGTTGATTTCTCGGCACGTACT 17454 Query 668918 GTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 |||||||| | || || | ||| | || ||||| ||||||| || Sbjct 17453 GTTATTACACCAGACCCAACTATAAATATCGATGAACTTGGTGTACC 17407 >seq18 Length=917142 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/179 (71%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167 |||||| ||| |||||||| | ||||| | ||| | ||| | || | | | Sbjct 446604 ACATCAAAGGTACCACCACCAAGGTCAAATACAAGGATGTTCTTCTCAACACCCT---TC 446660 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||||||||| || |||| || ||||||| | ||||| | || ||||| | ||||||| Sbjct 446661 TTATCAAGACCGTAGGCAATAGTAGCAGCAATGGGTTCGTCGATGATTCTAACAACATTA 446720 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 518286 |||||||| | || ||||| || || ||||| || || | |||||| || || || Sbjct 446721 AGACCAGCGACAACGCCAGCATCCTTTGTCGCTTGCCTCTGGGCATCGTTGAAGTAAGC 446779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780486549546208