Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq636 206 2e-47 seq114 165 5e-35 seq15 165 5e-35 seq830 131 1e-24 seq49 125 5e-23 seq442 95.1 8e-14 seq252 95.1 8e-14 seq65 93.3 3e-13 seq59 93.3 3e-13 seq126 89.7 3e-12 >seq636 Length=102301 Score = 206 bits (228), Expect = 2e-47 Identities = 545/812 (67%), Gaps = 24/812 (3%) Strand=Plus/Plus Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGT 475424 || |||||||| | |||||||||||||| || ||||| || ||| | || |||| | Sbjct 60921 ACTGCTGGAGACACTCATCTTGGTGGTGAGGACTTTGACAACAGAATGGTTAATCAC--T 60978 Query 475425 GTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTT-CAACATCTGCTAAAGCA-TT 475482 |||| |||| || |||||||| || || ||| || | | | | | ||| || Sbjct 60979 TTGTTCAAGAGTTTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACC-CGAGAGCTCTT 61037 Query 475483 AAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAAC 475542 | || || | ||||| |||||||| | || ||||| ||||||| || | | ||||| Sbjct 61038 AGGAGGT-TGAGAACGGCTTGTGAGAGAGCAAAGCGGACTCTTTCATCCACCGCGCAAAC 61096 Query 475543 TACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGC 475602 ||| |||| |||| ||||| ||||||||||| || | | || ||| || || | || Sbjct 61097 CACTATTGAGATTGACTCTCTCTTTGAAGGAATCGACTTTTATTCTCCGATCACTCGCGC 61156 Query 475603 TAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT 475662 | |||||| || || |||||||||||||| || || || |||| | |||| Sbjct 61157 AAGATTTGAGGAGCTTAACATGGATCTCTTTAGAAAGTGTATGGAGCCTGTTG-AGAAGT 61215 Query 475663 -TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 |||| | ||| ||||| | ||||| | ||| || ||||| |||||||||| || ||| Sbjct 61216 GTCTCCGTGATGCTAAAATGGACAAGAGCAC-GGTTCATGATGTTGTTCTTGTTGGTGGT 61274 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT---TTTAATGGTAAAAAG 475777 || || | || || ||| | || | |||| | | || || ||||||||| || Sbjct 61275 TCTACGCGTATCCCTAAAGT-TCAGCA--GCTTCTACAAGATTTCTTCAATGGTAAAGAG 61331 Query 475778 TTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAG 475835 | || |||| || || || || || || || || || || || || || || || | Sbjct 61332 CT--CTGCAAGTCTATTAACCCCGACGAGGCCGTGGCTTACGGTGCAGCGGTTCAGGCCG 61389 Query 475836 CTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTAACT 475894 | ||| | | ||| || ||||||| | | | || | |||| |||| || || Sbjct 61390 CGATTCTGACTGGTGAAGGGAACGAGAAGGTGCAAGACCTTCT-CTTGCTTGATGTCACA 61448 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAAT 475954 || || || | ||||||||||||| || || ||||||| | | | || | || || Sbjct 61449 CCTCTCTCTCTCGGTCTTGAAACAGCAGGTGGAGTTATGACCACTTTGATACAGAGGAAC 61508 Query 475955 ACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 || | || || ||| || | | || || || ||||| ||||| |||||| || | Sbjct 61509 ACAACGATACCGACCAAGAAGGAACAGGTCTTCTCTACTTACTCTGACAATCAACCAGGT 61568 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | |||||||| ||| | || ||||| || ||| | ||| Sbjct 61569 GTTTTGATCCAAGTGTACGAAGGTGAGAGAGCAAGAACCAAAGACAACAACCTTTTGGGA 61628 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || | || ||||| ||||| ||||| | || || ||||| || || | Sbjct 61629 AAGTTCGAGCTCTCCGGTATCCCTCCGGCTCCACGTGGCGTCCCTCAGATCACGGTCTGT 61688 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGT 476166 || || ||||||||||| ||||| || ||||| Sbjct 61689 TTCGACATTGATGCAAACGGTATCCTCAATGT 61720 >seq114 Length=758912 Score = 165 bits (182), Expect = 5e-35 Identities = 537/817 (66%), Gaps = 18/817 (2%) Strand=Plus/Minus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATG 475422 ||||||| |||||| | |||||||||||||||||||| || || ||| | || | || Sbjct 381099 CAACAGCCGGAGATACCCATCTTGGTGGTGAAGATTTCGACAACAGAATGGTTAACCACT 381040 Query 475423 GTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTT-CAACATCTGCTAAAGCA- 475480 |||| |||| || |||||||| || || ||| || | | | | | ||| Sbjct 381039 TTGTGC--AAGAGTTTAAGAGGAAGAACAAGAAGGATATTAGCGGTAACC-CGAGAGCTC 380983 Query 475481 TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAA 475540 ||| || || | ||||| ||||| || | || ||| | |||||||||| | |||| Sbjct 380982 TTAGGAGGT-TGAGAACAGCTTGCGAGAGAGCAAAGAGGACTCTTTCTTCCACCGCTCAG 380924 Query 475541 ACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGG 475600 || || | || |||| ||||| |||||||||||||||| || ||| || || | Sbjct 380923 ACCACCATCGAGATTGACTCTCTGTTTGAAGGAATTGATTTCTATTCTCCAATCACCCGC 380864 Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 |||| ||| || || || |||||||| ||||| || || || || || || Sbjct 380863 GCTAGATTCGAGGAGCTTAACATGGATCTCTTCAGAAAGTGTATGGAGCCTGTCGAG-AA 380805 Query 475661 GT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGAG 475718 || |||| | ||| | || | ||||| | |||| || ||||| |||| ||||| || | Sbjct 380804 GTGTCTCCGTGATGCCAAGATGGACAAGAGCACA-GTGCATGATGTTGTCCTTGTCGGTG 380746 Query 475719 GTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGT 475778 |||| || | || || || | || |||| | | || || || || || Sbjct 380745 GTTCTACTCGTATCCCCAAGGTTCAGCAATTGCTCCAAGACTTCTTCAACGGCAAGGAGC 380686 Query 475779 TAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836 | || |||| || || || ||||| ||||| |||||||| || || || || || || Sbjct 380685 TC--TGCAAGTCTATCAACCCCGATGAGGCTGTGGCATATGGTGCAGCCGTTCAGGCTGC 380628 Query 475837 TATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGACGTAACTC 475895 ||| || ||| || | |||||||| | | | || | |||| |||| || || | Sbjct 380627 GATTCTAAGCGGTGAAGGAAACGAGAAAGTTCAAGACCTTCT-CTTGCTTGATGTCACGC 380569 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 | || || | ||||||||||| | ||| || | ||||| | | | || | ||||| | Sbjct 380568 CTCTCTCCCTTGGTCTTGAAACCGCTGGTGGTGTCATGACCACTTTGATCCAGAGAAACA 380509 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015 | | ||||| ||| || | | || || || || ||||| || || || || || Sbjct 380508 CGACGATCCCGACCAAGAAGGAACAGGTCTTCTCTACCTATTCAGACAACCAGCCAGGTG 380449 Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075 | |||||| ||| |||||||| ||| || || || || ||| || || | Sbjct 380448 TGTTGATCCAAGTCTACGAAGGTGAGAGAGCCAGAACCAAGGACAACAACCTCCTCGGTA 380389 Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135 || | || || || ||||| ||||| | || || || || || || | Sbjct 380388 AATTCGAGCTATCTGGAATCCCTCCGGCTCCACGTGGTGTCCCACAGATCACGGTCTGCT 380329 Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 | || |||||||| |||||||| || || || |||| Sbjct 380328 TCGACATTGATGCGAATGGTATCCTCAACGTCTCTGC 380292 >seq15 Length=895683 Score = 165 bits (182), Expect = 5e-35 Identities = 527/807 (65%), Gaps = 13/807 (2%) Strand=Plus/Minus Query 475363 AGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCA 475420 ||| ||||| |||||| | || || ||||||||||| ||||| || |||||||| | || Sbjct 471792 AGCTACAGCCGGAGATACTCACCTCGGTGGTGAAGACTTTGACAACAGACTTGTGAACCA 471733 Query 475421 TGGTGTGTTGAAGATTTCAAGAGGAAAAATAA--AGTTGATCTTTCAACATCTGCTAAAG 475478 | | |||| || ||||||||||| |||| || ||| | || || | | Sbjct 471732 T--TTCGTTGCGGAGTTCAAGAGGAAGCATAAGAAGGATATCAGTGGGAAT--GCGAGGG 471677 Query 475479 CATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTC 475538 | | || | || ||||| |||||||| | || ||| || | |||||||| | ||| Sbjct 471676 CGCTTAGGAGGCTGAGAACAGCTTGTGAGAGAGCAAAGAGAACGCTTTCTTCCACCGCTC 471617 Query 475539 AAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAA 475598 | || ||| | || | |||||| | || || | |||| | | || | Sbjct 471616 AGACGACTATCGAGATCGATTCTTTGCACGAGGGTGTCGATTTCTACGCGACCATCTCGC 471557 Query 475599 GGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAAC 475658 | || | |||||||| || | ||||| || || ||| || || || || || Sbjct 471556 GTGCGAGGTTTGAAGAGATGAATATGGATCTGTTCAGGAAATGTATGGATCCTGTGGAGA 471497 Query 475659 AAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAG 475718 |||| || ||||| | || |||||||| || || || | |||||||| || | Sbjct 471496 AAGTCCTTAGAGACGCCAAGATTGACAAAAGCAGCGTGCACGAGGTGGTTCTTGTTGGGG 471437 Query 475719 GTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAG 475777 | || || || ||||| ||||| || | ||| || || | || || || || || Sbjct 471436 GGTCGACGAGGATTCCGAAAATTC-AGCAGCTCTTGCAAGATTTCTTCAACGGGAAGGAG 471378 Query 475778 TTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCT 475837 ||| |||| |||| ||||| ||||||||||| ||||||||||| || || || || Sbjct 471377 TTATGCAAAAGCATAAACCCTGACGAAGCTGTTGCCTATGGAGCTGCGGTTCAGGCCGCG 471318 Query 475838 ATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCA 475897 ||| | | ||| || | ||| || | | || || | ||| ||||||| | || Sbjct 471317 ATTCTGACTGGTGAAGGAAGCGATAAGGTCCAGGATCTTCTGCTTCTTGACGTGGCGCCG 471258 Query 475898 CTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGAC-AGAAATAC 475956 || | || ||||||||| || ||| | |||||| | ||| | | || || || Sbjct 471257 CTAAGCCTTGGAATTGAAACAGCCGGTGGGGTGATGACTG-TGTTAATACCGAGGAACAC 471199 Query 475957 TCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGT 476016 | | || || || || |||| || ||||| || | || || || || || Sbjct 471198 GACGGTGCCTTGTAAGAAGGAGCAAGTGTTCTCCACGTACGCGGACAACCAGCCAGGCGT 471139 Query 476017 AACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAAC 476076 |||||| ||| |||||| ||| | | || ||||| || ||| ||||| || Sbjct 471138 TCTGATCCAAGTCTATGAAGGAGAACGTGCAAGGACCAAAGACAACAACCTTCTTGGTAC 471079 Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136 ||| | || | || |||||||| || || | ||||||||||| || | ||| || Sbjct 471078 ATTTGAGCTCAAGGGCATTCCTCCGGCGCCACGTGGAGTTCCTCAGGTTAATGTTTGCTT 471019 Query 476137 TGATATTGATGCAAATGGTATTCTTAA 476163 ||| |||||||| ||||| | |||||| Sbjct 471018 TGACATTGATGCGAATGGGA-TCTTAA 470993 >seq830 Length=118371 Score = 131 bits (144), Expect = 1e-24 Identities = 530/815 (65%), Gaps = 20/815 (2%) Strand=Plus/Minus Query 475363 AGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCA 475420 ||| || || ||||| | ||||| |||||||| ||||| || || || | || | || Sbjct 92263 AGCCACTGCAGGAGACACTCATCTCGGTGGTGAGGATTTCGACAACAGGATGGTGAACCA 92204 Query 475421 TGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCA 475480 |||| |||| ||||||||||| || || || || | | | ||| Sbjct 92203 CTTTGTGC--AAGAGTTCAAGAGGAAGAACAAGAAGGACATTAGCGGAAACCCGAGAGCT 92146 Query 475481 TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAA 475540 |||| | | ||||| |||||||| | || ||| | |||||||||| | | ||| Sbjct 92145 CTAAGGAGGTTGAGAACCGCTTGTGAGAGAGCAAAGAGGACTCTTTCTTCCACCGCACAA 92086 Query 475541 ACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGA-TTATAATACTCTTATTACAAG 475599 || || | || |||| ||||| ||||||||||| || || || | ||| || || | Sbjct 92085 ACCACCATCGAGATTGACTCTCTGTTTGAAGGAATCGACTTCTACT-CTCCAATCACCCG 92027 Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659 |||| || || || | ||||| || ||||| || || || ||||| | Sbjct 92026 CGCTAGGTTCGAGGAGCTGAACATGGATCTTTTCAGAAAGTGTATGGAGCCTGTTGAG-A 91968 Query 475660 AGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGA 475717 ||| |||| | ||| |||| | ||||| | | | ||| | || |||| || || || Sbjct 91967 AGTGTCTCCGTGATGCTAAGATGGACAAGAGCTCC-GTCGACGACGTTGTCCTAGTCGGT 91909 Query 475718 GGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT-TCATCATATTTTAATGGTAAAAA 475776 || || || | || || || | || | || || | | || || |||||| | Sbjct 91908 GGCTCCACCCGTATCCCCAAGGTCCAGCAACTACTCCTCGACTTCTTC-AACGGTAAAGA 91850 Query 475777 GTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCA 475834 | | || || | || || || |||||||| || || || || || ||||| || ||| Sbjct 91849 GCTC--TGCAAATCTATTAACCCCGATGAAGCCGTGGCGTACGGTGCAGCTGTTCAGGCA 91792 Query 475835 GCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACT 475894 |||||| | ||| | ||||||| | | || || || | ||||||| || Sbjct 91791 GCTATTCTCAGCGGTGAGGGTAACGAGAAGGTTCAAGATCTTCTATTGCTTGACGTGACA 91732 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTT-ATTGACAGAAA 475953 ||||| || | ||||||||||| | |||||| | ||||| |||| || | ||||| Sbjct 91731 CCACTCTCTCTCGGTCTTGAAACTGCTGGAGGAGTCATGAC-CGTCTTGATCCAAAGAAA 91673 Query 475954 TACTCCTATCCCATGCAAAAAATCAA-AAGTATTTTCCACTTATTCTGATAATCAAACAA 476012 || | ||||| |||| || || |||| || || ||||| || || || ||| || Sbjct 91672 CACAACCATCCC-GACAAAGAAGGAACAAGTCTTCTCGACTTACTCAGACAACCAACCAG 91614 Query 476013 CTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTG 476072 || |||||| ||| ||||| || ||| | || ||||| || ||| | | Sbjct 91613 GAGTCTTGATCCAAGTCTACGAAGGAGAGAGAGCAAGAACCAAAGACAACAACCTTTTGG 91554 Query 476073 GAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTA 476132 | | || | || ||||| |||||||| || ||||| ||||| || || || Sbjct 91553 GTAAATTCGAGCTCTCTGGTATCCCTCCTGCCCCAAGAGGTGTTCCCCAGATCACCGTCT 91494 Query 476133 CTTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 |||||| ||||| || || ||||| || || ||| Sbjct 91493 GTTTTGACATTGACGCGAACGGTATCCTCAACGTT 91459 >seq49 Length=794425 Score = 125 bits (138), Expect = 5e-23 Identities = 523/811 (64%), Gaps = 16/811 (2%) Strand=Plus/Minus Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421 || || || ||||| | ||||| |||||||| ||||| || || ||| | || | || Sbjct 54978 GCGACTGCAGGAGACACTCATCTCGGTGGTGAGGATTTCGACAACAGAATGGTGAACCAC 54919 Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCA- 475480 | ||| | || ||||||||||| || || || || | | | ||| Sbjct 54918 --TTTGTCCAGGAGTTCAAGAGGAAGAACAAGAAGGACATTAGCGGAAACCCGAGAGCTC 54861 Query 475481 TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAA 475540 ||| || || | ||||| || ||||| | || ||| | |||| || ||| | |||| Sbjct 54860 TTAGGAGGT-TGAGAACCGCCTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACAGCTCAG 54802 Query 475541 ACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGG 475600 || || ||||| | || ||||| | || || ||||||| | ||| || || | Sbjct 54801 ACCACCATTGAAATCGACTCTCTGTACGAGGGTATTGATTTCTACTCTCCAATCACCCGT 54742 Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 || | |||||| || | |||||||| |||||| || || || ||||| || Sbjct 54741 GCAAGATTTGAGGAGCTCAACATGGATCTCTTCAGAAAATGTATGGAGCCTGTTGAG-AA 54683 Query 475661 GT-TCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719 || ||| | ||| | || | |||||| |||| | || |||| | || || || Sbjct 54682 GTGTCTTCGTGATGCCAAGATGGACAAAAGCTCAGTCGACGATGTTGTCTTGGTCGGTGG 54623 Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTT-TCATCATATTTTAATGGTAAAAAGT 475778 |||||| | || || || | | |||| || | | || || || ||| || Sbjct 54622 CTCAACACGTATCCCCAAGGTCCAGCAGTTGCTCCTCGACTTCTTC-AACGGCAAAGAGC 54564 Query 475779 TAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836 | || || | | || || |||||||| ||||| || || |||||||| || ||||| Sbjct 54563 TT--TGCAAATCCATCAACCCCGATGAAGCCGTTGCCTACGGTGCTGCTGTTCAGGCAGC 54506 Query 475837 TATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACGTAACTC 475895 |||| | ||| | ||||||| | | || | | |||| | ||||| || | Sbjct 54505 TATTCTCAGCGGTGAGGGTAACGAGAAGGTTCAAGATCTCCT-CTTGCTCGACGTCACGC 54447 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 ||||||| | ||||||||||| | ||||| | |||||| | | || | || || | Sbjct 54446 CACTTTCTCTTGGTCTTGAAACCGCCGGAGGAGTCATGACTGTTTTGATCCAAAGGAACA 54387 Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015 | | ||||| || || | | || || || ||||| || || || ||| || | Sbjct 54386 CGACCATCCCCACGAAGAAGGAACAGGTCTTCTCAACTTACTCAGACAACCAACCAGGCG 54327 Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075 | |||||| ||| ||||| || || | || ||||| || ||| | |||| Sbjct 54326 TCTTGATCCAAGTCTACGAAGGCGAGAGGGCAAGGACCAAAGACAACAACCTTTTGGGAA 54267 Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135 || | ||| ||||| ||||| ||||||||||| |||||||| || ||| || Sbjct 54266 AGTTCGAGCTTTCTGGTATCCCTCCAGCTCCCAGAGGTGTTCCTCAGATCACAGTCTGTT 54207 Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGT 476166 | || ||||| ||||| ||||| || || || Sbjct 54206 TCGACATTGACGCAAACGGTATCCTCAACGT 54176 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| |||||||| ||||| || || ||||| |||||||| Sbjct 169789 ACGGAGACGGAGAACAAGGTGAAGTGTCGACTCTTTCTGAATGTTGTAATCCGCTAGAGT 169848 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||| || ||||| || || | || || ||||| || || || Sbjct 169849 CCGACCATCTTCAAGCTGCTTCCCGGCAAATATTAGCCTCTGCTGGTCAGGTGGGATCCC 169908 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| || ||||| |||||| ||||| ||||||| | | | | |||| Sbjct 169909 TTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTATCAGAGCTCTCGA-CCTCAA 169967 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || | |||||| || || || || Sbjct 169968 GAGTGATGGTCTTTCCCGTCAAAGTCTTGACAAATATCTG 170007 Score = 111 bits (122), Expect = 1e-18 Identities = 133/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| ||||| || ||||||| | ||||||||| ||||| || || || ||||| | || Sbjct 170743 ATTGTAATCTGCAAGAGTTCGGCCATCTTCAAGCTGCTTGCCTGCGAAGATAAGCCTCTG 170802 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || || |||||||| ||||||||||| ||||||||| |||||| || ||||| || Sbjct 170803 CTGGTCCGGAGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTGTCGATAGTGTC 170862 Query 480713 AGTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || ||| ||||| || ||||| || || || || ||||| || || || Sbjct 170863 CGAGCTCTCAA-CTTCTAGGGTGATGGTTTTGCCTGTAAGGGTTTTAACAAAGATCTG 170919 Score = 102 bits (112), Expect = 5e-16 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| |||||||| ||||| | | ||||||||| || || || || || || || | || Sbjct 170515 ATTGTAATCAGCGAGAGTGCGGCCATCTTCAAGCTGTTTGCCTGCGAAGATGAGTCTCTG 170574 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||| || ||||| || |||||||||||||||||||| ||| ||| || || || || Sbjct 170575 TTGGTCCGGAGGGATCCCTTCCTTGTCTTGAATCTTAGCTTTAACATTGTCGATTGTGTC 170634 Query 480713 AGTG-TGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | | || ||| ||||| || ||||| || ||||| || || ||||| || || Sbjct 170635 TGAGCTCTCAA-CTTCTAGGGTGATGGTTTTGCCAGTGAGGGTTTTGACGAAGATCTG 170691 Score = 98.7 bits (108), Expect = 6e-15 Identities = 159/224 (71%), Gaps = 10/224 (4%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACT--TTCTTTAGAAACATTATAATCAGCTA 480606 ||||||||| | ||||| ||||| || ||| |||| || || |||||||| | Sbjct 170017 ACGAAGACGCAACACAAGGTGAAGCGTTGACTCCTTCTGTATG----TTGTAATCAGCAA 170072 Query 480607 GAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAA 480666 |||| | ||| || || || || || || || || || | |||||||| ||||| | Sbjct 170073 GAGTGCGACCATCCTCTAGCTGTTTGCCGGCGAAGATGAGTCTCTGTTGATCCGGAGGGA 170132 Query 480667 TTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTT 480725 |||||||||||||||||||||| ||| ||| || || || || | | | | | || Sbjct 170133 TTCCTTCCTTGTCTTGAATCTTCGCTTTAACATTGTCGATTGTGTCTGAGCTCTCCACTT 170192 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || ||||||||||| || ||||| || || || || Sbjct 170193 CCAA-TGTTATGGTTTTACCGGTAAGGGTCTTGACAAATATCTG 170235 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||| || | ||| | || |||||| | || ||||| || || |||| Sbjct 170249 AGACGGAGCACCAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCTGCAAGCGTTCGA 170308 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || || || || ||||| || || || | || || || ||||| || |||||| Sbjct 170309 CCATCCTCTAGCTGTTTGCCAGCGAATATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCC 170368 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||||||||||||| |||||| |||||||| || | | | | || || ||| || Sbjct 170369 TTGTCTTGAATCTTTGCCTTGACATTGTCAATAGTGTCCGAGCTTTCAACTTCCAA-TGT 170427 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || |||||||| ||||| || || Sbjct 170428 TATGGTTTTGCCTGTAAGAGTCTTGACGAAGATCTG 170463 Score = 93.3 bits (102), Expect = 3e-13 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| || || || || ||||| ||||| ||||| || || || ||| ||| Sbjct 55212 ACTGTTCCAGCCTACTTCAACGACTCTCAGCGTCAGGCAACGAAGGACGCCGGAGTCATT 55153 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | || || | ||||| || || || || || ||||| || ||||||||||| Sbjct 55152 GCTGGTTTGAACGTAATGCGTATCATCAACGAGCCTACGGCAGCTGCCATTGCTTATGGT 55093 Query 474866 CTTGATAAGAA 474876 || || ||||| Sbjct 55092 CTAGACAAGAA 55082 >seq442 Length=166222 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| ||||||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 81941 ATCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTT 81882 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| || || |||||||| |||| | | | | ||||||||| | Sbjct 81881 GTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCGA-CTTCAAGGGTGA 81823 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| || || || ||||| || || Sbjct 81822 TTGTCTTGCCGGTAAGGGTTTTCACGAATATCTG 81789 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||||||||| || || ||||| || || || |||||||| |||||||| Sbjct 81713 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCTTCCTT 81654 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| || || || || || |||| | | | | | ||| ||| | Sbjct 81653 GTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAA-GGTGA 81595 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || |||||||| ||||| ||||||||||| Sbjct 81594 TTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTG 81561 >seq252 Length=291119 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||||||||| || || ||||| || || || ||||| || |||||||| Sbjct 178932 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTT 178991 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| |||||| ||||| || || | | | | | ||||||||| | Sbjct 178992 GTCCTGGATCTTAGCTTTGACGTTATCAATGGTGTCGGAGCTCTCGA-CTTCAAGGGTGA 179050 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| | |||||| |||||||| || Sbjct 179051 TCGTCTTGCCGGTTAAAGTCTTCACGAAAATCTG 179084 >seq65 Length=625306 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | ||||||||| || || || || ||||| || | || Sbjct 276257 ACGAAGACGGAGAACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGCCAAGGT 276198 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||||||||| || || ||||| || || || ||||| ||||| Sbjct 276197 GCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATTCC 276138 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 || || || |||||||| || || || || || |||| | | | | || | Sbjct 276137 CTCTTTATCCTGAATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTCTCCA-CCTCGA 276079 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| || || || ||||| ||||| ||||| ||||| Sbjct 276078 GGGTAATCGTCTTGCCAGTGAGTGTCTTCACGAAGATTTG 276039 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| || | |||||| ||||| | |||||||| || || || || | || Sbjct 275530 TTGTAATCGGCCAATGTTCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATTAGCCTCTGC 275471 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| || || ||||| ||||| || || ||||| ||| || || || || ||| Sbjct 275470 TGATCCGGTGGGATTCCCTCCTTATCCTGGATCTTGGCTTTAACGTTGTCGATCGTGTCA 275411 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | |||||||| || ||||| |||||||||||||||||||| || || Sbjct 275410 GAGCTTTCCACCTCAAGGGTGATCGTTTTCCCGGTGAGAGTCTTAACGAAGATCTG 275355 >seq59 Length=439719 Score = 93.3 bits (102), Expect = 3e-13 Identities = 355/548 (65%), Gaps = 12/548 (2%) Strand=Plus/Minus Query 475625 GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGA 475683 ||||| || || || || || ||||| || |||| | | |||||| |||| | || Sbjct 252769 GATCTTTTCAGGAAGTGTATGGAGCCCGTGGAG-AAGTGTTTGAGAGATGCTAAGATGGA 252711 Query 475684 CAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAG 475743 ||| |||||||| |||| || || || || || |||||||| || ||| | Sbjct 252710 CAAGAGCGGTGTCCATGATGTTGTCCTCGTTGGTGGCTCCACAAGAATCCCCAAAGTGC- 252652 Query 475744 AGAAATGCTTT--CATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGA 475800 || | ||||| || | | || || || ||| || | | |||| | || ||||| Sbjct 252651 AGCA--GCTTTTGCAAGACTTCTTCAACGGGAAAGAGCTCTGTAAAAGCATTAACCCTGA 252594 Query 475801 TGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGA 475860 |||||||||||| |||||||| ||||| ||||| || || || ||| || |||| Sbjct 252593 TGAAGCTGTTGCCTATGGAGCAGCTGTTCAAGCTGCGATCTTGAGCGGTGAAGGGAACGA 252534 Query 475861 GAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGT 475920 ||| | | || | |||| |||| || ||||| | || || ||| | ||||| | Sbjct 252533 GAAGGTCCAAGATTTGTTACTCCTTGATGTCACTCCCTTGTCCTTGGGTTTGGAAACCGC 252474 Query 475921 TGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAA--ATCA 475978 || || ||||||| || ||| || || || | || || ||| || | || Sbjct 252473 CGGTGGTGTTATGACCGTCCTGATTCCGAGGAACACCACGATTCCGACCAAGAAGGAGCA 252414 Query 475979 AAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGT 476038 | |||| || || ||||| || || || | |||| |||||| ||| ||||| Sbjct 252413 GA--TATTCTCGACCTATTCAGACAACCAGCCCGGTGTACTGATCCAAGTCTACGAAGGA 252356 Query 476039 GAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCT 476098 || ||| | || || || || ||| | || | || | ||| ||||| || Sbjct 252355 GAGAGAGCAAGAACAAAGGACAACAACCTTTTGGGGAAGTTCGAGCTTAGCGGTATACCA 252296 Query 476099 CCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATT 476158 ||||| || ||||| ||||| || || || ||| || || || || ||||| || Sbjct 252295 CCTGCACCAAGAGGTGTTCCGCAGATCACCGTGTGTTTCGACATCGACGCCAATGGAATC 252236 Query 476159 CTTAATGT 476166 || || || Sbjct 252235 CTGAACGT 252228 >seq126 Length=290673 Score = 89.7 bits (98), Expect = 3e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 290828 CCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCA 290887 ||||||| ||| | || |||||||| || || || || || ||||||||||| || Sbjct 54696 CCATATGATAAAGCGGCAGCTGTTGGCTCGTTGATGATCCTCTGGACATCAAGACCGGCG 54755 Query 290888 ATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTA 290947 ||||| | | ||| || || || | |||||||| || ||||||||||| |||||| Sbjct 54756 ATTTTCCCAGCATCCTTGGTGGCTTGTCTCTGCGCATCGTTGAAATAAGCAGGAACTGTA 54815 Query 290948 ATAACAGCTTTT 290959 | |||||||||| Sbjct 54816 ACAACAGCTTTT 54827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267888887641664