Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq252 141 8e-29 seq49 131 2e-25 seq65 122 8e-23 seq442 116 3e-21 seq70 114 1e-20 seq187 111 1e-19 seq69 105 6e-18 seq73 89.7 5e-13 >seq252 Length=291119 Score = 141 bits (156), Expect = 8e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || ||||| ||||| || || | | Sbjct 179315 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACGATTACACTCGAGGTGGAGAGCTCT 179256 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || || || ||||| || ||||| ||||| Sbjct 179255 GACACAATCGATAATGTCAAGGCCAAGATACAGGATAAGGAAGGCATTCCTCCGGATCAG 179196 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACAT-GTCAGATTAT 24880 || ||| | ||||| ||||| || ||||| |||||| ||| |||| | | ||||| Sbjct 179195 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGC---ACATTGGCCGATTAC 179139 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||||| ||||| || |||||||||||||| |||| || || Sbjct 179138 AACATTCAAAAGGAGTCGACTCTCCACTTGGTGTTGCGTCTGCGTGGTGG 179089 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || ||||||| | ||||| || || || || | || || || | | Sbjct 179543 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAGACGATCACATTGGAGGTGGAGAGCTCG 179484 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| ||||| || ||||| ||||| Sbjct 179483 GACACGATTGACAACGTGAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAG 179424 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| ||||| || ||||| ||||| |||| || | || || ||| Sbjct 179423 CAAAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACATTGGCCGACTACAAC 179364 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| ||||| || ||||| |||||||||||||| Sbjct 179363 ATTCAGAAGGAGTCTACACTTCACTTGGTGTTGCG 179329 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || ||||||| || || || || || ||||| || | || Sbjct 179087 ATGCAGATTTTCGTGAAGACTTTAACCGGCAAGACGATCACCCTTGAAGTCGAGAGCTCC 179028 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| ||||| || ||||| || || Sbjct 179027 GACACCATTGATAACGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 178968 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACAT-GTCAGATTAT 24880 || ||| | ||||| || || || ||||| |||||| ||| |||| | | ||||| Sbjct 178967 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGC---ACATTGGCCGATTAC 178911 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| || |||||||||||||| |||| || || Sbjct 178910 AACATTCAGAAGGAGTCGACTCTTCACTTGGTGTTGCGTCTGCGTGGTGG 178861 Score = 122 bits (134), Expect = 8e-23 Identities = 156/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || |||||||||| || || || || || || || | | Sbjct 178859 ATGCAGATTTTTGTGAAGACCTTAACCGGTAAGACCATCACACTGGAGGTTGAGAGCTCG 178800 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 178799 GACACCATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 178740 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 || ||| | ||||| || ||||||||||| |||||| ||| ||| || | || || Sbjct 178739 CAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCG---CACATTGGCTGACTAC 178683 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| |||||||| ||||| || |||||||| Sbjct 178682 AACATCCAAAAGGAGTCGACTCTTCACTTGGT 178651 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| || || ||||| || || || || ||||| || ||| | Sbjct 180228 GATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGTTC 180169 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| |||| | |||||||| || || || ||||| || || |||| Sbjct 180168 TGACACGATCGACAACGTTAAAGC-CAAGATCCAGGATAAGGAGGGAATCCCACCGGATC 180110 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| ||||| || ||| |||| || | | | | ||||| | Sbjct 180109 AGCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTTGCCGATTACA 180050 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || |||||||| || || || |||| | || | || ||||| Sbjct 180049 ACATCCAGAAGGAATCTACTCTCCATCTGGTTCTCAGACTCCGTGGAGG 180001 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || ||||| || || | Sbjct 179999 ATGCAGATCTTCGTCAAAACCCTAACGGGAAAGACGATCACCCTCGAGGTGGAGAGTTCT 179940 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||||||||| || || || || || || || Sbjct 179939 GACACCATCGACAACGTCAAGGCTAAA-ATCCAAGACAAGGAGGGGATCCCACCAGACCA 179881 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||||| |||||||| || || ||||| ||| | | || || || Sbjct 179880 GCAAAGGCTGATCTTCGCCGGGAAGCAACTCGAGGACGGACGAACTCTTGCTGACTACAA 179821 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| ||||| || || Sbjct 179820 CATCCAGAAGGAGTCGACTCTTCA 179797 >seq49 Length=794425 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| |||| || || || || || || || || ||||| |||||| | | Sbjct 171379 GATGCAGATCTTTGTTAAGACTCTTACAGGCAAGACGATAACCCTCGAGGTAGAAAGCTC 171320 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| || ||||||||||| |||||||| || Sbjct 171319 GGACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAAGAAGGAATCCCTCCCGACCA 171260 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||||||||| |||||||| |||||| ||| || | ||||| || Sbjct 171259 GCAGAGGCTCATCTTTGCCGGTAAACAGCTCGAGGATGGCCGAACTCTGGCTGATTACAA 171200 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||| || || || || |||||||| Sbjct 171199 TATCCAAAAAGAGTCAACCCTTCACTTGGT 171170 Score = 129 bits (142), Expect = 5e-25 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||||||||| || || | ||||| || | | Sbjct 170238 ATGCAGATATTTGTCAAGACCCTTACCGGTAAAACCATAACATTGGAAGTGGAGAGCTCA 170179 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| ||||| |||||||| |||||||| ||||| |||||| Sbjct 170178 GACACAATCGACAATGTTAAAGCGAAGATTCAAGACAAGGAAGGAATCCCTCCGGATCAA 170119 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | ||||| ||||| |||||||| |||||| ||| | | || | ||||| | Sbjct 170118 CAGAGACTCATCTTCGCCGGCAAACAGCTAGAGGATGGTCG-CACTCTTG-CTGATTACA 170061 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||| || ||||| || || || ||| | |||||||| Sbjct 170060 ACATACAGAAGGAGTCAACGCTTCACCTTGTGTTGCG 170024 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| || || || ||||| || || || ||||| || | | Sbjct 171150 ATGCAAATTTTTGTTAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 171091 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 171090 GATACCATCGACAATGTCAAGGCTAAGATTCAGGATAAAGAAGGAATCCCTCCGGATCAA 171031 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||||| |||||||| |||||| | | || | ||||| || Sbjct 171030 CAGAGGCTGATCTTTGCCGGTAAACAGCTCGAGGATGGCCGTACTTTGGCTGATTACAAT 170971 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || |||||||| || || || |||||||| Sbjct 170970 ATCCAAAAGGAGTCAACCCTTCACTTGGT 170942 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| ||||||| || || || ||||| || || || ||||| || | | Sbjct 170922 ATGCAGATCTTTGTTAAAACCCTTACAGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 170863 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| || ||||| ||||| || ||||| || || Sbjct 170862 GACACTATCGACAATGTCAAGGCAAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCAG 170803 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || || ||||| || ||| ||| | ||||||| || Sbjct 170802 CAGAGGCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGAACTCTTGCAGATTACAAT 170743 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || || |||||||| | | ||| | ||||| Sbjct 170742 ATCCAGAAAGAATCAACCCTGCACTTGGTTCTTAGGTTGAGAGGAGG 170696 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || | ||||| ||| | | Sbjct 170466 ATGCAGATCTTCGTCAAGACTCTTACAGGCAAAACCATAACATTGGAAGTTGAAAGCTCG 170407 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| |||||||| ||||| || ||||| || || Sbjct 170406 GACACTATTGACAATGTCAAGGCAAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAG 170347 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | || || || || |||||||| |||||| |||| | | || ||||||| | Sbjct 170346 CAGAGACTCATATTCGCTGGCAAACAGCTAGAGGATGGTCGA-ACGCTTG-CAGATTACA 170289 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||| || || ||||| || | || |||||| Sbjct 170288 ACATACAGAAAGAATCAACCTTGCATTTGGTG 170257 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || ||||| || || || ||||| || | | Sbjct 170694 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCA 170635 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| ||||| |||||||| ||||| || ||||| || ||| Sbjct 170634 GACACAATCGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCAA 170575 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || || |||||||| || ||| | | | | ||||| || Sbjct 170574 CAGAGACTCATCTTCGCAGGCAAACAGCTTGAAGATGGCCGCACTCTCGCTGATTACAAT 170515 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || |||||||| | | ||| | ||||| Sbjct 170514 ATCCAGAAAGAGTCAACCCTGCACTTGGTTCTTAGGTTGAGAGGAGG 170468 Score = 98.7 bits (108), Expect = 9e-16 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 24734 AAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATC 24793 || || || || ||||| || ||| | | ||||| | | | || || |||||| Sbjct 171576 AAGACCATAACCCTCGACGTCGAAAGCTCAGACACCATCAACAATGTCAAGGCAAAGATA 171517 Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853 || ||||| |||||||| |||| || || ||| | ||||||||||||| |||||||| Sbjct 171516 CAGGACAAGGAAGGAATCCCTCTAGACCAGCAAAGGCTGATCTTTGCCGGTAAACAGCTT 171457 Query 24854 GAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 |||||| | | | || | ||||| || ||||||||||| || || || |||||| Sbjct 171456 GAGGATGGTCGTACCTTGGCTGATTACAATATTCAAAAGGATTCAACCCTGCACTTG 171400 >seq65 Length=625306 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| ||||||| | || || || || ||||| || || || || | | Sbjct 275808 ATGCAGATCTTCGTTAAAACCTTGACGGGCAAGACCATTACCCTGGAGGTGGAGAGCTCG 275867 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 275868 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGATCAG 275927 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| ||||| || ||||| || || |||| || | || || ||| Sbjct 275928 CAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCAGAACATTGGCTGACTACAAC 275987 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || ||||| |||||||||||||| Sbjct 275988 ATCCAGAAGGAGTCTACACTTCACTTGGTGTTGCG 276022 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| || || ||||| ||||| || || || || || ||| | | Sbjct 275351 GATGCAGATCTTCGTTAAGACTCTCACCGGGAAAACGATCACCCTTGAGGTGGAAAGCTC 275410 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| |||| | |||||||| || || || ||||| || || |||| Sbjct 275411 TGACACGATCGACAACGTTAAAGC-CAAGATCCAGGATAAGGAGGGAATCCCACCGGATC 275469 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| ||||| || ||| |||| || |||| || | ||||| | Sbjct 275470 AGCAGAGGCTAATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGAACATTGGCCGATTACA 275529 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| || ||||| ||||| || |||||||| Sbjct 275530 ACATCCAGAAGGAGTCGACTCTTCACTTGGT 275560 Score = 109 bits (120), Expect = 5e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | |||||||| || || || || || || || | | Sbjct 276264 ATGCAGATTTTCGTGAAGACATTGACCGGTAAGACCATCACTCTGGAGGTTGAGAGCTCG 276323 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||| ||||| || ||||| || || Sbjct 276324 GACACGATTGATAACGTGAAGGCAAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 276383 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 || ||| | ||||| || ||||||||||| |||||| ||| ||| || | || || Sbjct 276384 CAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCG---CACATTGGCCGACTAC 276440 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| || ||||| ||||| || || ||||| Sbjct 276441 AACATCCAGAAGGAGTCGACTCTTCATTTGGT 276472 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || || || || || || || || || ||| || | Sbjct 413145 GATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACCATAACCCTTGAGGTCGAATCCTC 413086 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| |||||||||||||| |||||||| || || || || Sbjct 413085 TGACACCATCGACAATGTCAAAGCGAAGATCCAAGACAAGGAAGGAATCCCGCCGGACCA 413026 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || || |||||||||||||| || | | | | || || || Sbjct 413025 GCAGCGATTGATTTTCGCGGGGAAACAGCTGGAAGACGGCCGCACGCTCGCCGACTACAA 412966 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| ||||| || || Sbjct 412965 CATCCAGAAGGAGTCGACGCTTCA 412942 >seq442 Length=166222 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| || || ||||| || ||||| || ||||| || ||| | | Sbjct 80645 GATGCAGATCTTCGTTAAGACTCTGACCGGGAAGACTATCACCCTCGAGGTGGAAAGCTC 80704 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| |||| | ||| ||||| || || ||||| || ||||| |||| Sbjct 80705 TGACACCATCGACAACGTTAAAGCCAAA-ATCCAGGATAAGGAAGGGATTCCTCCGGATC 80763 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| ||||| || ||| |||| || ||| || | || || | Sbjct 80764 AGCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGAACTTTGGCCGACTACA 80823 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| || ||||| ||||| || |||||||| Sbjct 80824 ACATCCAGAAGGAGTCGACCCTCCACTTGGT 80854 Score = 111 bits (122), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || ||||| || || || || | || || || | | Sbjct 81558 ATGCAAATTTTCGTGAAGACACTCACCGGCAAGACAATCACCTTGGAGGTCGAGAGCTCT 81617 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| ||||| ||||| || ||||| || || Sbjct 81618 GACACAATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 81677 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACAT-GTCAGATTAT 24880 || ||| | ||||| || || || ||||| |||||| ||| |||| | | ||||| Sbjct 81678 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGC---ACATTGGCCGATTAC 81734 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||| ||||| ||||| || |||||||||||||| | || || ||| Sbjct 81735 AACATTCAGAAGGAGTCGACTCTTCACTTGGTGTTGCGTCTCCGTGGTGGC 81785 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || ||||| || || | || Sbjct 80874 ATGCAGATCTTCGTCAAAACCCTAACAGGAAAGACGATCACCCTCGAGGTGGAGAGCTCC 80933 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || ||||| || || Sbjct 80934 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCTCCGGACCAG 80993 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA-TTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| ||||| || || || ||||| | || | || | || || || Sbjct 80994 CAGAGGTTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGGACTCTTG-CTGACTACAA 81052 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| ||||| || || Sbjct 81053 CATCCAGAAGGAGTCGACCCTTCA 81076 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || | || || ||| | || Sbjct 81330 ATGCAGATCTTCGTCAAGACCTTGACGGGAAAGACCATCACTTTGGAGGTTGAAAGCTCC 81389 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||| ||||| || ||||| ||||| || || Sbjct 81390 GACACCATTGACAACGTGAAGGCCAAA-ATCCAGGACAAGGAGGGAATCCCTCCGGACCA 81448 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| ||||| || ||||| |||||| | | | || | ||||| || Sbjct 81449 GCAGAGGTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGATTACAA 81508 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 || || || || || || || |||||||| Sbjct 81509 TATCCAGAAAGAGTCAACGCTTCACTTGGT 81538 >seq70 Length=414679 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || || || || ||| | | Sbjct 19547 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAATCGTC 19488 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 19487 GGATACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCGCCGGATCA 19428 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| |||||||| |||||||| || || | | | || || || Sbjct 19427 GCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACTCTCGCGGACTACAA 19368 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || |||||||| | || || | ||||| Sbjct 19367 CATCCAGAAGGAGTCGACGCTTCACTTGGTTCTCCGTCTGAGAGGAGG 19320 >seq187 Length=227058 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || || || || || || || || || Sbjct 169905 ATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACAATCACCCTTGAGGTCGAGTCCTCC 169846 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| |||||||| ||||| || || Sbjct 169845 GACACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGAATCCCTCCGGACCAG 169786 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| || |||||||| ||||| ||||| | | | | | || || ||| Sbjct 169785 CAGCGATTGATTTTCGCCGGGAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTACAAC 169726 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || ||| |||| Sbjct 169725 ATCCAGAAGGAGTCGACGCTTCACCTGGT 169697 >seq69 Length=847923 Score = 105 bits (116), Expect = 6e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || | || || || || || ||||| || ||| | | Sbjct 38435 ATGCAGATTTTCGTGAAGACTCTTGCGGGGAAGACAATAACACTCGAGGTTGAATCATCG 38494 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| ||||| || || || ||||| Sbjct 38495 GACACGATCGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGCATCCCGCCGGATCAG 38554 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || || ||||||| ||||| ||||| ||||| ||| ||| || || | | || || | Sbjct 38555 CAGCGGCTGATCTTCGCCGGAAAACAACTGGAAGATGGTCG-GACACTCGCC-GACTACA 38612 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| || ||||||||||| || || ||||| Sbjct 38613 ACATCCAGAAGGAATCGACGCTTCATTTGGT 38643 >seq73 Length=838620 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/144 (75%), Gaps = 5/144 (3%) Strand=Plus/Plus Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853 || ||||||||||| ||||| || ||||| ||| | |||| ||||||||||| || ||| Sbjct 422932 CAGGACAAAGAAGGTATACCACCAGATCAGCAAAGGCTGATATTTGCCGGGAAGCAACTG 422991 Query 24854 GAGGATTCGAGAAACA-TGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| | || |||| || | ||||| ||||| || || || || || || || |||| Sbjct 422992 GAGGA-TGGACGAACACTGGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTGGT 423050 Query 24913 GTTGCGATTGCGCGGAGGCGGAAC 24936 ||| | || | |||| ||||| Sbjct 423051 CTTGAG---GCTCAGAGGTGGAAC 423071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449859538663040