Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq636 188 5e-42 seq114 176 3e-38 seq49 136 3e-26 seq59 131 1e-24 seq830 111 1e-18 seq126 111 1e-18 seq1 105 5e-17 seq67 98.7 7e-15 seq2 89.7 4e-12 seq18 87.8 1e-11 >seq636 Length=102301 Score = 188 bits (208), Expect = 5e-42 Identities = 683/1052 (65%), Gaps = 20/1052 (2%) Strand=Plus/Minus Query 281424 CGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGA 281483 |||| | ||||| || ||||| || ||||| | || || ||| || ||||||| Sbjct 61728 CGGCGGAGACATTGAGGATACCGTTTGCATCAATGTCGAAACAGACCGTGATCTGAGGGA 61669 Query 281484 CCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTT 281543 | || | |||| || ||||| || | | || |||||| | || || |||| Sbjct 61668 CGCCACGTGGAGCCGGAGGGATACCGGAGAGCTCGAACTTTCCCAAAAGGTTGTTGTCTT 61609 Query 281544 TAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAAT 281603 | || | || ||||| ||| | | |||||| ||| | | |||||| || || | Sbjct 61608 TGGTTCTTGCTCTCTCACCTTCGTACACTTGGATCAAAACACCTGGTTGATTGTCAGAGT 61549 Query 281604 AAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662 |||| | || || ||| || || || || |||||||| || | || | | || Sbjct 61548 AAGTAGAGAAGAC-CTGTTCCTTCTTGGTCGGTATCGTTGTGTTCCTCTGTATCAAAGTG 61490 Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||||| ||||| |||||||| | ||| ||||| ||||| |||||||||| | || | Sbjct 61489 GTCATAACTCCACCTGCTGTTTCAAGACCGAGAGAGAGAGGTGTGACATCAAGCAAGAGA 61430 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | | ||| | || || | || |||| ||||| || || |||| || ||||| Sbjct 61429 AGGTCTTGCACCTTCTCGTTCCCTTCACCAGTCAGAATCGCGGCCTGAACCGCTGCACCG 61370 Query 281783 TATGCAACAGCTTCATCAGGATTAACAG--TTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 || || || || || || || |||| || || || || | |||||||||||| |||| Sbjct 61369 TAAGCCACGGCCTCGTCGGGGTTAATAGACTTGCAG--AGCTCTTTACCATTGAAGAAAT 61312 Query 281841 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 281900 | ||||| || || ||||| ||||| | || || ||||| | |||| |||| Sbjct 61311 CTTGTAGAAGCTGCTGAACTTTAGGGATACGCGTAGAACCACCAACAAGAACAACATCAT 61252 Query 281901 GCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959 | ||| ||| | || |||| ||| | ||| | | || ||||| || || | || Sbjct 61251 GAACC-GTGCTCTTGTCCATTTTAGCATCACGGAGACACTTCTCAACAGGCTCCATACAC 61193 Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA 282019 |||||| | || ||| || || ||| | || | ||| | | || | || || Sbjct 61192 TTTCTAAAGAGATCCATGTTAAGCTCCTCAAATCTTGCGCGAGTGATCG-GAGAATAAAA 61134 Query 282020 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 || |||||||| || | ||| |||| ||||| || ||||| | | || || || | Sbjct 61133 GTCGATTCCTTCAAAGAGAGAGTCAATCTCAATAGTGGTTTGCGCGGTGGATGAAAGAGT 61074 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCT-TTTGCTGATTGATTC 282136 || || || | ||||| || || || | | || |||| ||| | | | | | | Sbjct 61073 CCGCTTTGCTCTCTCACAAGCCGTTCTCA-ACCTCCTAAGAGCTCTCGGGTTACCG-CTA 61016 Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 282196 | ||| | || | || ||||| || |||| |||| | | || | | || ||| Sbjct 61015 ATATCCTTCTTGTTCTTCCTCTTAAACTCTTGAACAAAGTGATTAACCATTCTGTTGTCA 60956 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 || || ||||| || | | ||| | ||| | |||| | |||| || | || ||| Sbjct 60955 AAGTCCTCACCACCAAGATGAGTGTCTCCAGCAGTAGACTTCACTTCAAAGATACCTTCT 60896 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 || | | | ||||| ||||| || |||||||| | |||||| || | || ||| Sbjct 60895 TCGATGGTGAGAAGAGAGACATCGAAAGTACCACCACCAAGATCAAAGATCAAAACGTTC 60836 Query 282317 ATTTCT----TTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | ||| || | | || |||||||| || || || | || || || ||||| Sbjct 60835 TTCTCTCCAACGCTCGTCGCCTTCTTATCAAGGCCGTAAGCGATGGCTGCTGCGGTTGGC 60776 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || || || | |||||| || | ||||| || || || || || |||||||| Sbjct 60775 TCGTTGATGATACGCAAAACGTTCAAGCCAGCGATCACACCGGCGTCCTTTGTGGCTTGA 60716 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 | || || ||||| || || ||||||||||| Sbjct 60715 CGCTGAGAGTCGTTGAAGTAAGCAGGAACAGT 60684 >seq114 Length=758912 Score = 176 bits (194), Expect = 3e-38 Identities = 557/851 (65%), Gaps = 18/851 (2%) Strand=Plus/Plus Query 281633 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCA 281692 || || || |||||||| | || | | ||||||| | ||||||||| ||||| | |||| Sbjct 380499 GGGATCGTCGTGTTTCTCTGGATCAAAGTGGTCATGACACCACCAGCGGTTTCAAGACCA 380558 Query 281693 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 281752 || || ||||| |||||||||| | || || | ||||| ||| || | || ||| Sbjct 380559 AGGGAGAGAGGCGTGACATCAAGCAAGAGAAGGTCTTGAACTTTCTCGTTTCCTTCACCG 380618 Query 281753 ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG-- 281810 ||||| || || |||| || ||||||||||| ||||| ||||| || || | || Sbjct 380619 CTTAGAATCGCAGCCTGAACGGCTGCACCATATGCCACAGCCTCATCGGGGTTGATAGAC 380678 Query 281811 TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATAC 281870 || || || | || || ||||| || | | || | ||| ||||| || |||| Sbjct 380679 TTGCA--GAGCTCCTTGCCGTTGAAGAAGTCTTGGAGCAATTGCTGAACCTTGGGGATAC 380736 Query 281871 GAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCC 281929 ||| || || || || | |||| ||||||| ||||| | || |||| || | ||| Sbjct 380737 GAGTAGAACCACCGACAAGGACAACATCATGCA-CTGTGCTCTTGTCCATCTTGGCATCA 380795 Query 281930 AATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCG 281989 | | || || || || || | || ||| || | || ||| || ||| Sbjct 380796 CGGAGACACTTCTCGACAGGCTCCATACACTTTCTGAAGAGATCCATGTTAAGCTCCTCG 380855 Query 281990 AATTTAGCTCTAGTAAGAGTGACATTA-TAATCAATTCCTTCGAACAAAGAATCAACTTC 282048 ||| |||| | || | | || | || ||||||||||||| |||| ||| |||| || Sbjct 380856 AATCTAGCGCGGGTGATTG-GAGAATAGAAATCAATTCCTTCAAACAGAGAGTCAATCTC 380914 Query 282049 AATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAG 282108 || || || |||| | ||||| || | | || || | || || ||||| || | Sbjct 380915 GATGGTGGTCTGAGCGGTGGAAGAAAGAGTCCTCTTTGCTCTCTCGCAAGCTGTTCTCA- 380973 Query 282109 TCTTCGTAAG-GCT-TTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 282166 | || |||| ||| | | | | | | | ||| | || | || ||||| || ||| Sbjct 380974 ACCTCCTAAGAGCTCTCGGGTTACCG-CTAATATCCTTCTTGTTCTTCCTCTTAAACTCT 381032 Query 282167 TCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCT 282226 | ||| | | || | | || || ||||||||||| || | | |||| ||| Sbjct 381033 TGCACAAAGTGGTTAACCATTCTGTTGTCGAAATCTTCACCACCAAGATGGGTATCTCCG 381092 Query 282227 GACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTT 282286 | || | | |||| ||| | || ||||||| | | ||| | || || || Sbjct 381093 GCTGTTGACTTCACTTCGAAGATACCTTCTTCAATGGTGAGAAGGGAGACGTCGAAAGTA 381152 Query 282287 CCACCACCCATATCAAAAATAAGTACATTCATTTCT------TTGTCTTGGTTTTTATCA 282340 |||||||| | |||||| || | || ||| | ||| || | || || ||| Sbjct 381153 CCACCACCAAGATCAAAGATCAAGACGTTCTTCTCTCCAACGCTGGTTGCCTTCTTGTCA 381212 Query 282341 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 282400 ||||| || || | ||| || || || || || || || || | |||||| || | ||| Sbjct 381213 AGACCGTAGGCGATAGCTGCTGCGGTCGGCTCGTTGATGATACGCAAAACGTTCAAGCCA 381272 Query 282401 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 282460 ||||| ||| || || || |||||||| | || || ||||| || || |||||||| Sbjct 381273 GCAATAACTCCGGCGTCCTTTGTGGCTTGACGCTGAGAGTCGTTGAAGTAAGCAGGAACG 381332 Query 282461 GTAATAACGGC 282471 || | |||||| Sbjct 381333 GTGACAACGGC 381343 Score = 116 bits (128), Expect = 3e-20 Identities = 544/852 (64%), Gaps = 20/852 (2%) Strand=Plus/Plus Query 281633 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCA 281692 || || |||||||| || || | | ||||||| | |||||| ||||| || | ||| Sbjct 384137 GGGATGGTTGTGTTCCTGGGGATCAAAGTGGTCATGACACCACCGGCTGTCTCAAGACCG 384196 Query 281693 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 281752 ||||| |||||||||||||| | | | || || ||| | || || | || ||| Sbjct 384197 AGAGAGAGAGGAGTGACATCGAGCAACAGAAGATCTTGGACCTTCTCGTTTCCTTCACCG 384256 Query 281753 ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAG-- 281810 || ||||| | || | |||||||| || ||||| || || || || || | | Sbjct 384257 CTGAGGATAGCGCCCTGGACGGCAGCACCGTAAGCAACGGCCTCGTCGGGGTTGATGGAC 384316 Query 281811 TTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATAC 281870 || || || | || || ||||| || | ||| | ||| |||||||| |||| Sbjct 384317 TTGCAG--AGCTCCTTTCCGTTGAAGAAGTCCTGAAGCAATTGCTGAACCTTAGGGATAC 384374 Query 281871 GAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCC 281929 | | || || ||||| | || | || || || ||| | || |||| || | ||| Sbjct 384375 GGGTGGAACCACCAACAAGGACGACATCGTGGACG-GTGCTCTTGTCCATCTTAGCATCA 384433 Query 281930 AATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCG 281989 | | || || || || || | || || || | ||| || || ||| Sbjct 384434 CGGAGACACTTCTCGACTGGCTCCATACACTTCCTGAAGAGGTCCATGTTGAGCTCCTCG 384493 Query 281990 AATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTC 282048 ||| |||| | || | ||| | || || ||||| || ||| | | ||| |||| || Sbjct 384494 AATCTAGCGCGTGTGATGGTGG-AGTAGAAGTCAATACCCTCGTAGAGAGAGTCAATCTC 384552 Query 282049 AATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAG 282108 || || || |||| | || || || | | || || | || || | || || | Sbjct 384553 GATGGTTGTCTGAGCGGTGGAGGAAAGGGTCCTCTTTGCTCTCTCGCAGGAAGTTCTCAA 384612 Query 282109 TCTTCGTAAG-GCTTTTGCTGATTG--ATTCAAATCTGTTTTATATTTTCTCTTGAAATC 282165 || | |||| ||| ||| | || | | | || | || || |||||||| || Sbjct 384613 CCTCC-TAAGAGCTCTTG--GGTTACCAGTGATGTCCTTCTTGCTCTTCCTCTTGAATTC 384669 Query 282166 TTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCC 282225 || |||| | | || | | || || |||||||||||||| | | || | || Sbjct 384670 TTGAACAAAGTGGTTAACCATTCTGTTGTCGAAATCTTCACCTCCAAGATGGGTGTCACC 384729 Query 282226 TGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGT 282285 | || || | |||| ||| | || || |||| | | ||| | ||||| ||| Sbjct 384730 GGCTGTCGCCTTAACTTCGAAGATACCTTCCTCAATGGTGAGAAGGGAGACATCGAAGGT 384789 Query 282286 TCCACCACCCATATCAAAAATAAGTACATTCATTTCT------TTGTCTTGGTTTTTATC 282339 |||||||| | ||| || || || || ||| | ||| || | ||||| || Sbjct 384790 ACCACCACCAAGATCGAAGATCAGCACGTTCTTCTCTCCAACGCTGGTTGCCTTTTTGTC 384849 Query 282340 AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACC 282399 |||||| || |||| ||| || || || || || || ||||| | || ||| || | ||| Sbjct 384850 AAGACCGTAGGCAATAGCTGCTGCGGTGGGCTCGTTGATAATACGCATAACGTTCAAACC 384909 Query 282400 AGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 282459 |||||| ||| ||||| || || ||||| | || || ||||| || || |||||||| Sbjct 384910 AGCAATAACTCCAGCATCCTTTGTAGCTTGACGCTGAGAGTCGTTGAAGTAAGCAGGAAC 384969 Query 282460 AGTAATAACGGC 282471 || | |||||| Sbjct 384970 GGTGACAACGGC 384981 >seq49 Length=794425 Score = 136 bits (150), Expect = 3e-26 Identities = 730/1147 (64%), Gaps = 22/1147 (2%) Strand=Plus/Plus Query 281330 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 281389 |||||| || |||||||||||| | || | || |||||||| | || || || Sbjct 54074 GCTTCTTGAACCATTCTCTCAATCTCGTCCTTTGACAATCTTCCCTTGTCGTTTGTGATT 54133 Query 281390 GTAATATTCTTGGATTTGTT-TGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 || || || || ||||| ||||| || || |||| | || || || ||||| || Sbjct 54134 GTGATCTTGTTCT-TTTGTCCTGTTGTCTTGTCCTCGGCCGAGACGTTGAGGATACCGTT 54192 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 || || | || || |||| || ||||| || ||||| |||| || ||||| || Sbjct 54193 TGCGTCAATGTCGAAACAGACTGTGATCTGAGGAACACCTCTGGGAGCTGGAGGGATACC 54252 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 | | || |||||| | || || ||||| || | | || || ||| | Sbjct 54253 AGAAAGCTCGAACTTTCCCAAAAGGTTGTTGTCTTTGGTCCTTGCCCTCTCGCCTTCGTA 54312 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 281628 | |||||| || | | ||| || ||||| ||||||| || || ||| || | Sbjct 54313 GACTTGGATCAAGACGCCTGGTTGGTTGTCTGAGTAAGTTGAGAAGAC-CTGTTCCTTCT 54371 Query 281629 ACAAGGA-ATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTA 281687 | || || || ||||| || | || | | ||||| | || || || ||||| | Sbjct 54372 TCGTGGGGATGGTCGTGTTCCTTTGGATCAAAACAGTCATGACTCCTCCGGCGGTTTCAA 54431 Query 281688 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 281747 |||||||||||| || ||||| || | | || | || ||||| || || | | | Sbjct 54432 GACCAAGAGAAAGTGGCGTGACGTCGAGCAAGAGGAGATCTTGAACCTTCTCGTTACCCT 54491 Query 281748 GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 281807 ||| ||||||||||| |||| ||||||||| || ||||| |||||||| || || | Sbjct 54492 CACCGCTGAGAATAGCTGCCTGAACAGCAGCACCGTAGGCAACGGCTTCATCGGGGTTGA 54551 Query 281808 CAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAA 281867 | || || | ||| || ||||| || | || | || ||||| || | Sbjct 54552 TGGATTTGCAAAGCTCTTTGCCGTTGAAGAAGTCGAGGAGCAACTGCTGGACCTTGGGGA 54611 Query 281868 TACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTG-ATTTATCCAGTTTTGAA 281926 |||| | ||| || || || || |||| || | | ||| | ||| |||| || | | Sbjct 54612 TACGTGTTGAGCCACCGACCAAGACAACATCGT-CGACTGAGCTTTTGTCCATCTTGGCA 54670 Query 281927 TCCAATAAAAC-TTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTC 281985 | || || || || ||||| || || | || ||| || | || || || Sbjct 54671 T-CACGAAGACACTTCTCAACAGGCTCCATACATTTTCTGAAGAGATCCATGTTGAGCTC 54729 Query 281986 TTCGAATTTAGCTCTAGTAAGAGTGACATTA-TAATCAATTCCTTCGAACAAAGAATCAA 282044 || ||| | || | || | | || | || ||||||| || ||| ||| ||| || | Sbjct 54730 CTCAAATCTTGCACGGGTGATTG-GAGAGTAGAAATCAATACCCTCGTACAGAGAGTCGA 54788 Query 282045 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCC 282104 |||||| || || |||| | ||| || || | | || || | ||||| || || | Sbjct 54789 TTTCAATGGTGGTCTGAGCTGTAGAGGAGAGAGTCCTCTTCGCTCTCTCACAGGCGGTTC 54848 Query 282105 TTAGTCTTCGTAAG-GCTTTTGCTGATTGATTCAAA--TCTGTTTTATATTTTCTCTTGA 282161 | | | || |||| ||| | | | || | || || | || | || ||||||| Sbjct 54849 TCA-ACCTCCTAAGAGCTCT--CGGGTTTCCGCTAATGTCCTTCTTGTTCTTCCTCTTGA 54905 Query 282162 AATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTAT 282221 | || | ||| | | || | | || || ||||| ||||| || | | ||| | Sbjct 54906 ACTCCTGGACAAAGTGGTTCACCATTCTGTTGTCGAAATCCTCACCACCGAGATGAGTGT 54965 Query 282222 TTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCAT 282281 ||||| || || | || | || | || ||||||| | | ||||| |||||| Sbjct 54966 CTCCTGCAGTCGCCTTCACCTCAAAGATACCTTCTTCAATGGTGAGAAGAGAGACATCAA 55025 Query 282282 GGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTTTGTCTTG----GTTTT 282335 || |||||||| | ||||| || | ||| ||| | | | |||| || | Sbjct 55026 AAGTACCACCACCAAGGTCAAAGATCAATACGTTCTTCTCCCCAACGCTTGTAGCCTTCT 55085 Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 | || |||||||| |||| ||||| || || || || || || || | || || || | Sbjct 55086 TGTCTAGACCATAAGCAATGGCAGCTGCCGTAGGCTCGTTGATGATACGCATTACGTTCA 55145 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 ||||||||| ||| || || || || || || | || || ||||| || || || | Sbjct 55146 AACCAGCAATGACTCCGGCGTCCTTCGTTGCCTGACGCTGAGAGTCGTTGAAGTAGGCTG 55205 Query 282456 GAACAGT 282462 ||||||| Sbjct 55206 GAACAGT 55212 >seq59 Length=439719 Score = 131 bits (144), Expect = 1e-24 Identities = 544/845 (64%), Gaps = 24/845 (3%) Strand=Plus/Plus Query 281633 GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCA 281692 ||||| || ||||| || ||| | |||||||| |||||| || ||||| ||||| Sbjct 252429 GGAATCGTGGTGTTCCTCGGAATCAGGACGGTCATAACACCACCGGCGGTTTCCAAACCC 252488 Query 281693 AGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCA 281752 | || | ||||||||||||| || | | || ||| | || || | || ||| Sbjct 252489 AAGGACAAGGGAGTGACATCAAGGAGTAACAAATCTTGGACCTTCTCGTTCCCTTCACCG 252548 Query 281753 A-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGT 281811 ||||| | || ||||||| ||| || ||||| ||||||||||||||||| |||| | Sbjct 252549 CTCAAGA-TCGCAGCTTGAACAGCTGCTCCATAGGCAACAGCTTCATCAGGGTTAATGCT 252607 Query 281812 TTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATAC 281870 || | || | ||| || ||||| || | ||| || ||| || || || || || | Sbjct 252608 TTTACAGAGCTCTTTCCCGTTGAAGAAGTCTTGCAA-AAGCTGCTGCACTTTGGGGATTC 252666 Query 281871 GAGATGATCCTCCAACTAATACAATTTCATG--CACCTGTGATTTATCCAGTTTTGAATC 281928 | || || ||||| | |||| ||||| |||| | || |||| || | ||| Sbjct 252667 TTGTGGAGCCACCAACGAGGACAACATCATGGACACCGCT--CTTGTCCATCTTAGCATC 252724 Query 281929 CAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTC 281988 ||| || || ||||| || | || || || | || ||||| || Sbjct 252725 TCTCAAACACTTCTCCACGGGCTCCATACACTTCCTGAAAAGATCCATGTTGAGTTCCTC 252784 Query 281989 GAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTC 282048 |||| | || | ||| | || || |||| || || ||| | | || || | || Sbjct 252785 GAATCTGGCACGAGTGATGGTCGTATAGAAATCGATGCCCTCGTAGAGGGAGTCGATCTC 252844 Query 282049 AATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAG 282108 || || || |||| | ||||| || | | || || | || || |||||||| || Sbjct 252845 TATTGTCGTCTGAGCGGTCGAAGAAAGGGTCCTCTTCGCCCTCTCGCAAGCTGTCCTCAG 252904 Query 282109 TCTTCGTAAGGCTTTTGCTGATT--GATTCAAATCTGTTTTATATTTTCTCTTGAAATCT 282166 || | |||||| ||| | || | | | ||| | || | |||||||| || || Sbjct 252905 CCTCCTCAAGGCTCTTG--GGTTCCCAGTGATATCCTTCTTGTGCTTTCTCTTAAACTCC 252962 Query 282167 TCAAC-ACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCC 282225 | ||| | | || | || | | || |||||||| ||||| || | | || | || Sbjct 252963 TGAACGAAATGAT-TCACCATCCTGTTGTCAAAATCCTCACCACCGAGATGCGTGTCACC 253021 Query 282226 TGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGT 282285 | ||| || | |||| || | || || |||| | | |||| ||||| || Sbjct 253022 AGCCGTGGCCTTCACTTCAAAGATACCTTCCTCAATCGTAAGCAGAGACACATCGAATGT 253081 Query 282286 TCCACCACCCATATCAAAAATAAGTACATTCATTTC-------TTTGTCTTGGTTT-TTA 282337 ||||| |||| ||| || || || || ||| | || | | | | ||| || Sbjct 253082 ACCACCGCCCAAATCGAAGATGAGAACGTTCTTCTCGCCAACACTAGAC--GCTTTCTTG 253139 Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 || ||||| ||||||| ||||| || ||||| || || || || | || || || ||| Sbjct 253140 TCTAGACCGTACGCAATCGCAGCCGCGGTTGGCTCGTTGATGATACGCATCACGTTGAGA 253199 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 |||| || ||| |||||||| || || || | || |||||||| || || ||||| Sbjct 253200 CCAGAGATGACTCCGGCATCTTTTGTCGCCTGACGCTGAGAATCGTTGAAGTAAGCAGGC 253259 Query 282458 ACAGT 282462 || || Sbjct 253260 ACTGT 253264 >seq830 Length=118371 Score = 111 bits (122), Expect = 1e-18 Identities = 662/1052 (63%), Gaps = 18/1052 (2%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || || || ||||| || || || | ||||| ||| || || || || ||||| Sbjct 91460 ACGTTGAGGATACCGTTCGCGTCAATGTCAAAACAGACGGTGATCTGGGGAACACCTCTT 91519 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 | ||||| ||||| || | | ||| | |||| | || || ||||| || | Sbjct 91520 GGGGCAGGAGGGATACCAGAGAGCTCGAATTTACCCAAAAGGTTGTTGTCTTTGGTTCTT 91579 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || || || ||| | | |||||| ||| | | ||| || ||||| ||||| | Sbjct 91580 GCTCTCTCTCCTTCGTAGACTTGGATCAAGACTCCTGGTTGGTTGTCTGAGTAAGTCGAG 91639 Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671 || ||| || || || || ||||||||||| | || | |||||| | Sbjct 91640 AAGACTTGTTCCTTCTTTGTCGGGATGGTTGTGTTTCTTTGGATCAAGACGGTCATGACT 91699 Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 || ||||| ||||| | ||| ||||| || || || || |||| | | || || |||| Sbjct 91700 CCTCCAGCAGTTTCAAGACCGAGAGAGAGTGGTGTCACGTCAAGCAATAGAAGATCTTGA 91759 Query 281732 AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 | || || | | | ||| ||||||||||| |||| ||| ||||| || || || Sbjct 91760 ACCTTCTCGTTACCCTCACCGCTGAGAATAGCTGCCTGAACAGCTGCACCGTACGCCACG 91819 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 |||||||| || |||| || || || | |||||| ||||| || | || ||| Sbjct 91820 GCTTCATCGGGGTTAATAGATTTGCAGAGCTCTTTACCGTTGAAGAAGTCGAGGAGTAGT 91879 Query 281852 TGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 281911 || ||||| || ||||| | || || || |||| |||| || | | | | | | Sbjct 91880 TGCTGGACCTTGGGGATACGGGTGGAGCCACCGACTAGGACAACGTCGT-CGACGGAGCT 91938 Query 281912 -TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAA 281970 || |||| || | ||| | | || ||||| || || | || ||| || | Sbjct 91939 CTTGTCCATCTTAGCATCACGGAGACACTTCTCAACAGGCTCCATACACTTTCTGAAAAG 91998 Query 281971 GTC--TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAA-TCAATTCC 282027 || || | || || ||||| |||| | || | | || | || || || ||||| Sbjct 91999 ATCCATGTTC--AGCTCCTCGAACCTAGCGCGGGTGATTG-GAGAGTAGAAGTCGATTCC 92055 Query 282028 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 282087 ||| |||| ||| |||| || || || ||||| | | ||||| || | | || || Sbjct 92056 TTCAAACAGAGAGTCAATCTCGATGGTGGTTTGTGCGGTGGAAGAAAGAGTCCTCTTTGC 92115 Query 282088 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA--TCTGTT 282145 | ||||| || || || | || | || ||| | | | || | || || | Sbjct 92116 TCTCTCACAAGCGGTTCTCAACCTCCTTAGAGCTCT--CGGGTTTCCGCTAATGTCCTTC 92173 Query 282146 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 282205 || | || |||||||| |||| ||| | | || | | || || ||||| ||| Sbjct 92174 TTGTTCTTCCTCTTGAACTCTTGCACAAAGTGGTTCACCATCCTGTTGTCGAAATCCTCA 92233 Query 282206 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 282265 || || | | ||| | ||||| || ||| | |||| || | || || |||| | Sbjct 92234 CCACCGAGATGAGTGTCTCCTGCAGTGGCTTTAACTTCAAAGATACCTTCCTCAATGGTT 92293 Query 282266 AAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT--CTT 282323 | ||||| ||||| || |||||||| | ||||| || | || ||| | | | Sbjct 92294 AGAAGAGAGACATCGAATGTACCACCACCAAGGTCAAAGATCAAAACGTTCTTCTCCCCA 92353 Query 282324 TGTCTTG----GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATA 282379 || | || || || || ||||| || | || || || || || || || || Sbjct 92354 ACACTAGTAGCCTTCTTGTCTAGCCCATAGGCGATGGCTGCTGCTGTAGGCTCGTTGATG 92413 Query 282380 ATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAA 282439 || | || ||| || | ||||| || || || || || |||||||| | || || Sbjct 92414 ATACGCATAACGTTCAAGCCAGCGATCACACCAGCGTCCTTTGTGGCTTGACGCTGAGAG 92473 Query 282440 TCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||||| || || || || ||||| | ||||| Sbjct 92474 TCGTTGAAGTAAGCCGGGACAGTGACGACGGC 92505 >seq126 Length=290673 Score = 111 bits (122), Expect = 1e-18 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | ||||| ||||| ||||| || || || || ||| |||| |||||| || Sbjct 54696 CCATATGATAAAGCGGCAGCTGTTGGCTCGTTGATGATCCTCTGGACATCAAGACCGGCG 54755 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 ||| | || ||||| || ||||||||||| || | |||||| ||||| |||||||| ||| Sbjct 54756 ATTTTCCCAGCATCCTTGGTGGCTTGTCTCTGCGCATCGTTGAAATAAGCAGGAACTGTA 54815 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 | ||| || | ||| | || || | |||||| || |||| ||||||||| Sbjct 54816 ACAACAGCTTTTGTGATGGTCTTCCCGAGATAAGCCTCAGCGGTTTCTTTCATTTT 54871 >seq1 Length=1953584 Score = 105 bits (116), Expect = 5e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | || ||||||||| || || || || ||||| ||| || | ||||||||| Sbjct 1259811 CCATAGGAAAGAGCAGCAGCTGTAGGCTCGTTTATAATCCTCTCGACTTCAAGACCAGCG 1259752 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || || ||||||||||| ||||| || || | |||||| || || ||||| ||||| Sbjct 1259751 ATCCTACCAGCATCTTTAGTTGCTTGCCTCTGAGCATCGTTGAAGTAAGCAGGGACAGTG 1259692 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 | || || | | ||| |||||||| ||||| ||||| | |||||| || Sbjct 1259691 ACGACAGCTTTCTTGACTGATTTTCCAAGGTAAGCTTCGGCTGTCTCTTTCATCTT 1259636 >seq67 Length=425973 Score = 98.7 bits (108), Expect = 7e-15 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| || |||||||| | ||||| | ||| | ||| | || | | | | Sbjct 338397 ACATCAAACGTACCACCACCAAGGTCAAAGACAAGGATGTTCTTCTCACCGCCCT---TC 338341 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || |||||||| || |||| |||||||||||| ||||| || |||||||| |||||| Sbjct 338340 TTGTCAAGACCGTAGGCAATAGCAGCAGCAGTGGGTTCGTTGATAATTCTAGCAACATTG 338281 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || ||||| || || ||||| || |||||||| || || | |||||| || || || Sbjct 338280 AGGCCAGCGATAACACCAGCATCCTTTGTGGCTTGCCTCTGGGCATCGTTGAAGTAAGCT 338221 Query 282455 GGAAC 282459 | ||| Sbjct 338220 GCAAC 338216 >seq2 Length=2373158 Score = 89.7 bits (98), Expect = 4e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 282353 AAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCT 282412 || |||||||| || ||||| || || || ||| |||| |||||| || ||| | || Sbjct 972474 AACGCAGCAGCGGTAGGTTCGTTGATGATCCTCTGGACATCAAGACCGGCGATTTTCCCG 972533 Query 282413 GCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 ||||| || ||||||||||| || | ||| || ||||| || |||||||||| Sbjct 972534 GCATCCTTTGTGGCTTGTCTCTGCGCATCATTGAAATAAGCTGGAACAGTAA 972585 >seq18 Length=917142 Score = 87.8 bits (96), Expect = 1e-11 Identities = 127/179 (71%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 |||||| ||| |||||||| | ||||| | ||| | ||| | || | | | Sbjct 446604 ACATCAAAGGTACCACCACCAAGGTCAAATACAAGGATGTTCTTCTCAACACCCT---TC 446660 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||||||||||| || |||| || ||||||| | ||||| | || ||||| | ||||||| Sbjct 446661 TTATCAAGACCGTAGGCAATAGTAGCAGCAATGGGTTCGTCGATGATTCTAACAACATTA 446720 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 |||||||| | || ||||| || || ||||| || || | |||||| || || || Sbjct 446721 AGACCAGCGACAACGCCAGCATCCTTTGTCGCTTGCCTCTGGGCATCGTTGAAGTAAGC 446779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740298119801568