Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq252 163 3e-35 seq442 129 5e-25 seq187 127 2e-24 seq65 127 2e-24 seq70 111 1e-19 seq49 109 5e-19 seq69 107 2e-18 seq5102 100 3e-16 seq130 91.5 1e-13 seq73 82.4 7e-11 >seq252 Length=291119 Score = 163 bits (180), Expect = 3e-35 Identities = 177/231 (77%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | ||| |||||| ||||||||||| |||||| Sbjct 179317 CCACCACGGAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCGGCC 179376 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| || |||||||| || || || ||||||| ||||| |||| |||| Sbjct 179377 AATGTTCTGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAACCTTTGCTGATCCGGAGGA 179436 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || |||||||| ||||||| ||||| |||| | | |||||| |||| || Sbjct 179437 ATGCCTTCCTTGTCTTGGATCTTTGCCTTCA-CGTTGTCAATCGTGTCCGAGCTC---TC 179492 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| |||||||| || || ||||| ||||| || || |||||||| Sbjct 179493 CACCTCCAATGTGATCGTCTTGCCGGTCAAGGTTTTAACGAAAATCTGCAT 179543 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | || |||||| |||||||||||||||||| Sbjct 178861 CCACCACGCAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCC 178920 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || |||||||| || || || || | ||||||||||||| ||| Sbjct 178921 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 178980 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTC---GCTCGATTC 35685 | || ||||||||| |||| || |||| ||| | | ||||| |||| || Sbjct 178981 ATGCCTTCCTTGTCCTGGATC-TTAGCTTTGACGTTATCAATGGTGTCGGAGCTC---TC 179036 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | |||||||| || || || ||||| ||||| || |||||||| Sbjct 179037 GACTTCAAGGGTGATCGTCTTGCCGGTTAAAGTCTTCACGAAAATCTGCAT 179087 Score = 127 bits (140), Expect = 2e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | || ||||||||||||||||||||||||| Sbjct 179089 CCACCACGCAGACGCAACACCAAGTGGAGAGTCGACTCCTTTTGAATGTTGTAATCGGCC 179148 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || |||||||| || || || || | |||||||| |||| |||| Sbjct 179149 AATGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGA 179208 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || ||||| ||| ||||| ||| | | | | | ||||| |||| ||| Sbjct 179209 ATGCCTTCCTTATCCTGTATCTTGGCCTTGACATTATCGATTGTGTCAGAGCTC---TCC 179265 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || ||||| || || || | || |||||||| |||||||| Sbjct 179266 ACCTCGAGTGTAATCGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 179315 Score = 109 bits (120), Expect = 5e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || ||||| || || | || || ||||| || || || || Sbjct 178668 CTCCTTTTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAA 178727 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||| | | |||||||| |||||| ||||| || Sbjct 178728 GATGAGACGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTGGATCTTCGCCTTCA-CGT 178786 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || ||||||| ||||| || ||||| || || || | Sbjct 178787 TGTCAATGGTGTCCGAGCTC---TCAACCTCCAGTGTGATGGTCTTACCGGTTAAGGTCT 178843 Query 35721 TCACAAATATCTGCAT 35736 ||||||| |||||||| Sbjct 178844 TCACAAAAATCTGCAT 178859 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | || | |||| ||| | ||| ||||| || |||||||||||||| Sbjct 180001 CCTCCACGGAGTCTGAGAACCAGATGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGCA 180060 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||| |||||| || || || || | || |||||| |||| || Sbjct 180061 AGAGTACGGCCGTCTTCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGTGGG 180120 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| |||| || |||| | |||| | | |||||| |||||| Sbjct 180121 ATTCCCTCCTTATCCTGGATC-TTGGCTTTAACGTTGTCGATCGTGTCAGAACTTTCCAC 180179 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||||| || || || | ||| || || || |||||||| Sbjct 180180 CTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 180227 >seq442 Length=166222 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||| || || || |||||||||||| Sbjct 81556 CCACCACGGAGACGGAGGACCAAGTGAAGCGTTGACTCTTTCTGGATATTGTAATCGGCC 81497 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || |||||||| || || || ||||||| ||||||||||| ||| Sbjct 81496 AAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 81437 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| ||| || ||||| |||| | | |||||| ||| || Sbjct 81436 ATTCCCTCCTTGTCCTGGATTTTGGCCTTCA-CGTTGTCAATGGTGTCGGAGCTTTCAAC 81378 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| ||||| || || |||||||| || || || || |||||||| Sbjct 81377 CTCCAAAGTGATGGTCTTTCCCGTCAAGGTCTTGACGAAGATCTGCAT 81330 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||| || | || |||||| |||||||||||||||||| Sbjct 81784 CCACCACGGAGACGCAACACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGCC 81725 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || |||||||| || || || || | ||||||||||||| |||| Sbjct 81724 AATGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 81665 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | ||||||||| |||||| ||||| |||| | | ||||| |||| || Sbjct 81664 ATACCTTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATTGTGTCAGAGCTC---TC 81609 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | || ||||| || || ||||| Sbjct 81608 GACCTCCAAGGTGATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 81558 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | ||| | ||| | || |||||| || |||||||| || || Sbjct 81100 CCACCACGGAGCCTGAGCACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 81041 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || || ||||| || || || ||||||| ||||||||||| |||| Sbjct 81040 AGAGTCCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 80981 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | |||||||| |||||| ||| | |||| | | ||||| |||| || Sbjct 80980 ATACCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC---TC 80925 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | |||||||| || || || | ||||| || || |||||||| Sbjct 80924 CACCTCGAGGGTGATCGTCTTTCCTGTTAGGGTTTTGACGAAGATCTGCAT 80874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || ||||| || || | || || |||||||| || || || Sbjct 81977 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 81918 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | ||||||||| |||||| ||||| || Sbjct 81917 AATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 81859 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || || || | ||||| || || || || | |||| Sbjct 81858 TGTCAATAGTGTCAGAGCTC---TCGACTTCAAGGGTGATTGTCTTGCCGGTAAGGGTTT 81802 Query 35721 TCACAAATATCTGCAT 35736 |||| ||||||||||| Sbjct 81801 TCACGAATATCTGCAT 81786 >seq187 Length=227058 Score = 127 bits (140), Expect = 2e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 169714 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTCCCGGCGAA 169773 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||||| ||| | | ||||||||| |||||| ||| | | | Sbjct 169774 AATCAATCGCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGGATCTTCGCCTTGACATT 169833 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || ||||||| |||||||| Sbjct 169834 GTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATTGTCTTCCCCGTCAGGGTTTTCAC 169893 Query 35725 AAATATCTGCATT 35737 || ||||||||| Sbjct 169894 GAAGATCTGCATT 169906 >seq65 Length=625306 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| | ||||| || | || |||||| || ||||||||||||||| Sbjct 275578 CCACCACGGAGCCTGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCGGCC 275519 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| |||| |||||| || || || || | || |||||| |||| || Sbjct 275518 AATGTTCTGCCGTCTTCCAACTGCTTTCCGGCGAAGATTAGCCTCTGCTGATCCGGTGGG 275459 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | |||||| ||| |||| || |||| | |||| | | |||||| ||| ||| Sbjct 275458 ATTCCCTCCTTATCCTGGATC-TTGGCTTTAACGTTGTCGATCGTGTCAGAGCT---TTC 275403 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| | ||||||||||| || || | ||| || || || |||||||| Sbjct 275402 CACCTCAAGGGTGATCGTTTTCCCGGTGAGAGTCTTAACGAAGATCTGCAT 275352 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||| || |||||||| |||||| Sbjct 276490 CCACCACGAAGACGGAGAACCAAATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 276431 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || ||||| || || || || || | ||||||||||||| ||| Sbjct 276430 AATGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 276371 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||||| ||||||| ||||| | | | |||||| |||| || Sbjct 276370 ATCCCTTCCTTGTCTTGGATCTTTGCCTTCACGTTATCAATCGTGTCCGAGCTC---TCA 276314 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || ||||| ||||| || ||||| || |||||||| Sbjct 276313 ACCTCCAGAGTGATGGTCTTACCGGTCAATGTCTTCACGAAAATCTGCAT 276264 Score = 109 bits (120), Expect = 5e-19 Identities = 166/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||| | ||| | ||| |||||| || |||||||| ||||| Sbjct 412918 CCACCACGGAGACGGAGCACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 412977 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| |||||||| || ||||| || ||||| ||||||||||||| || Sbjct 412978 AGCGTGCGGCCGTCTTCCAGCTGTTTCCCCGCGAAAATCAATCGCTGCTGGTCCGGCGGG 413037 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| || | | | | | ||||| ||||| ||| Sbjct 413038 ATTCCTTCCTTGTCTTGGATCTTCGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 413097 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744 || | || || || || ||||| | |||||||| || ||||||| ||| |||| Sbjct 413098 TCAAGGGTTATGGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCA-TCTTTGCG 413151 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| |||||||||||||| |||||||| || | || || Sbjct 276244 ACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCCGCCAAGGTGCGACCATCCTCG 276185 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | ||||||||||||| ||| | | ||| || ||| Sbjct 276184 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCCTGA 276125 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTT 35704 ||||| ||||| | | | ||||| |||| |||||||| | || ||||| Sbjct 276124 ATCTTGGCCTTCACGTTATCGATTGTGTCAGAGCTC---TCCACCTCGAGGGTAATCGTC 276068 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | || ||||| || || ||||| Sbjct 276067 TTGCCAGTGAGTGTCTTCACGAAGATTTGCAT 276036 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || || | ||||| |||| || |||||||| || || || Sbjct 275771 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 275712 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 || | ||||||||||||| ||| | | ||| || ||| ||| ||| | ||| | Sbjct 275711 GATGAGACGCTGCTGGTCCGGAGGGATTCCCTCTTTATCC-TGAATTTTGGCCTTGACGT 275653 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| |||| |||||||| | |||||||| || ||||| | |||| Sbjct 275652 TATCGATTGTGTCAGAGCTC---TCCACCTCGAGGGTGATCGTCTTTCCCGTTAGGGTTT 275596 Query 35721 TCACAAATATCTGCAT 35736 | || ||||| ||||| Sbjct 275595 TGACGAATATTTGCAT 275580 >seq70 Length=414679 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || |||||||| || || | || | |||| ||| Sbjct 19338 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTCCTTCCGTCTTCC 19397 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || |||| |||||||| |||| || | | ||||||||| | Sbjct 19398 AGCTGCTTCCCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATCCCTTCCTTGTCCTGG 19457 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | | ||| || |||||| ||||| | || ||||| || Sbjct 19458 ATCTTCGCCTTCACATTGTCGATCGTATCCGACGATTCAACCTCTAGGGTTATCGTCTTC 19517 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | |||||||| || |||||||| Sbjct 19518 CCCGTTAGGGTTTTCACGAAGATCTGCAT 19546 >seq49 Length=794425 Score = 109 bits (120), Expect = 5e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| || | || || | || || |||||||| || ||||| Sbjct 169819 CTCTTTCTGAATGTTGTAATCCGCTAGAGTCCGACCATCTTCAAGCTGCTTCCCGGCAAA 169878 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||| | || ||||||||| | || | | ||||||||| |||||| ||| | | | Sbjct 169879 TATTAGCCTCTGCTGGTCAGGTGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 169938 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||| || |||| || ||||| | ||||| || || ||||||||||| || Sbjct 169939 GTCAATCGTATCAGAGCTC---TCGACCTCAAGAGTGATGGTCTTTCCCGTCAAAGTCTT 169995 Query 35722 CACAAATATCTGCAT 35736 |||||||||||||| Sbjct 169996 GACAAATATCTGCAT 170010 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || || |||||||| || | ||||| | || || |||||||| || || || Sbjct 170732 TCTTTCTGGATATTGTAATCTGCAAGAGTTCGGCCATCTTCAAGCTGCTTGCCTGCGAAG 170791 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || ||||||||||| ||||| | ||||||||| |||||| ||| | | | Sbjct 170792 ATAAGCCTCTGCTGGTCCGGAGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTG 170851 Query 35666 GCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722 | | ||||| |||| || || || | ||||| ||||| || || | ||||| Sbjct 170852 TCGATAGTGTCCGAGCTC---TCAACTTCTAGGGTGATGGTTTTGCCTGTAAGGGTTTTA 170908 Query 35723 ACAAATATCTGCAT 35736 ||||| |||||||| Sbjct 170909 ACAAAGATCTGCAT 170922 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| || || || || || ||||||||||| || | ||||| | || || Sbjct 170257 CACCAAATGCAAGGTTGATTCTTTCTGTATGTTGTAATCTGCAAGCGTTCGACCATCCTC 170316 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||| || || || ||||| | | ||||||||||| ||| | | |||||||| Sbjct 170317 TAGCTGTTTGCCAGCGAATATGAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTGTCTTG 170376 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||| | | | | | ||||| ||| ||| || |||| || || || Sbjct 170377 AATCTTTGCCTTGACATTGTCAATAGTGTCCGAGCT---TTCAACTTCCAATGTTATGGT 170433 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || || | ||| || || || |||||||| Sbjct 170434 TTTGCCTGTAAGAGTCTTGACGAAGATCTGCAT 170466 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||| | || | ||| |||||| || ||||||||||| || Sbjct 170012 CCACCACGAAGACGCAACACAAGGTGAAGCGTTGACTCCTTCTGTATGTTGTAATCAGCA 170071 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || || || || || | | ||| || |||| ||| Sbjct 170072 AGAGTGCGACCATCCTCTAGCTGTTTGCCGGCGAAGATGAGTCTCTGTTGATCCGGAGGG 170131 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | | ||||||| | ||| || |||| | ||| | | ||||| |||| || Sbjct 170132 ATTCCTTCCTTGT-CTTGAATCTTCGCTTTAACATTGTCGATTGTGTCTGAGCTC---TC 170187 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| |||| || || |||||||| || | || || |||||||||||||| Sbjct 170188 CACTTCCAATGTTATGGTTTTACCGGTAAGGGTCTTGACAAATATCTGCAT 170238 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| |||||||| |||||||| || | || || ||||| ||||| ||||| Sbjct 171416 TCCTTTTGAATATTGTAATCAGCCAAGGTACGACCATCCTCAAGCTGTTTACCGGCAAAG 171475 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTT 35653 |||| || |||||||| ||| | | ||||||||| |||||| Sbjct 171476 ATCAGCCTTTGCTGGTCTAGAGGGATTCCTTCCTTGTCCTGTATCTTT 171523 >seq69 Length=847923 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||| ||||| || |||||||| ||||| | || || | || ||| Sbjct 38643 ACCAAATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGTGTCCGACCATCTTCC 38584 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || || || || || || |||| ||||||||| |||| || | || ||||||||| | Sbjct 38583 AGTTGTTTTCCGGCGAAGATCAGCCGCTGCTGATCCGGCGGGATGCCTTCCTTGTCCTGG 38524 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| |||| | | | | |||||| ||||| ||||| | || || || || Sbjct 38523 ATCTTAGCTTTCACATTGTCGATCGTGTCCGATGATTCAACCTCGAGTGTTATTGTCTTC 38464 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 |||| | ||| ||||| || ||||||||||| Sbjct 38463 CCCGCAAGAGTCTTCACGAAAATCTGCATTCT 38432 >seq5102 Length=3010 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || ||||| || || | || || ||||| || || || || Sbjct 2734 CTCCTTCTGGATGTTATAGTCAGCCAATGTGCGACCATCCTCGAGCTGTTTTCCAGCGAA 2793 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||||| || ||||||||| |||||| ||||| || Sbjct 2794 GATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 2852 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || || || | ||||| || || |||||||| || | Sbjct 2853 TGTCAATGGTGTCGGAGCTC---TCGACTTCAAGTGTGATTGTCTTCCCCGTCAAGGTCT 2909 Query 35721 TCACAAATATCTGCAT 35736 | || || |||||||| Sbjct 2910 TGACGAAAATCTGCAT 2925 >seq130 Length=298546 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/192 (71%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| | |||||||||||| |||| || || | || || ||||| || || || || Sbjct 143393 TCCTTCTTGATGTTGTAATCGCCCAATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAG 143452 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||||| |||| | ||| || ||| |||||| ||||| | Sbjct 143453 ATCAGCCTCTGCTGGTCCGGCGGAATACCCTCTTTATCCTGGATCTTGGCCTTCACGTTA 143512 Query 35666 GCCACCGTGTCGCTCGA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722 | | ||||| ||| |||||| || | ||||| || || || |||||||| || Sbjct 143513 TCGATGGTGTC---CGAGTCTTCCACTTCTAAGGTGATGGTCTTCCCTGTCAAAGTCTTT 143569 Query 35723 ACAAATATCTGC 35734 || || |||||| Sbjct 143570 ACGAAAATCTGC 143581 >seq73 Length=838620 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | |||||| |||| ||| | ||| ||| || || ||||||||||| | Sbjct 423070 TTCCACCTCTGAGCCTCAAGACCAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCCG 423011 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||| ||||| | || ||||| ||||| || |||||||||| || ||||| || Sbjct 423010 CCAGTGTTCGTCCATCCTCCAGTTGCTTCCCGGCAAATATCAGCCTTTGCTGATC 422956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450755462861440