Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq161 87.8 6e-13 >seq161 Length=278270 Score = 87.8 bits (96), Expect = 6e-13 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 21142 TTTCAAGTCGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGG 21201 ||||| ||| |||||||||| |||||||||| ||||||||||| |||||| | || Sbjct 126047 TTTCATCGCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGG 125988 Query 21202 TTCGAATCCTGTCTCCGCAAC 21222 ||| ||||||||||||||||| Sbjct 125987 TTCAAATCCTGTCTCCGCAAC 125967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162511737881824