Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thlaspi_20arvense_20[genbank_20GCA_5F000956625.1_202015-03-19] 6,768 sequences; 343,012,389 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq49 138 8e-28 seq69 118 7e-22 seq187 107 1e-18 seq65 100 2e-16 seq73 96.9 2e-15 seq252 95.1 8e-15 seq466 87.8 1e-12 >seq49 Length=794425 Score = 138 bits (152), Expect = 8e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| || ||||| ||||| || |||||||| | | Sbjct 170694 ATGCAGATCTTCGTCAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCA 170635 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| ||||| | || ||| ||||| ||||| | || || || || Sbjct 170634 GACACAATCGACAATGTTAAAGC-TAAGATTCAAGACAAGGAAGGGATCCCTCCGGACCA 170576 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || || |||||||| || ||||| | |||||| | | |||||||| Sbjct 170575 ACAGAGACTCATCTTCGCAGGCAAACAGCTTGAAGATGGCCGCACTCTCGCTGATTACAA 170516 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || |||||||| || | || || ||| | |||||| ||||||| Sbjct 170515 TATCCAGAAAGAGTCAACCCTGCACTTGGTTCTTAGGTTGAGAGGAGG 170468 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||||||||| || ||||| ||||| || |||||||| | || Sbjct 171150 ATGCAAATTTTTGTTAAAACCCTCACTGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 171091 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || ||| | || | || ||| || |||||||| | || || ||||| Sbjct 171090 GATACCATCGACAATGTCAAGGC-TAAGATTCAGGATAAAGAAGGAATCCCTCCGGATCA 171032 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || |||||||| ||||| || || || | || ||||| | |||||||| Sbjct 171031 ACAGAGGCTGATCTTTGCCGGTAAACAGCTCGAGGATGGCCGTACTTTGGCTGATTACAA 170972 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| ||||| || | || || ||| | ||||| ||||||| Sbjct 170971 TATCCAAAAGGAGTCAACCCTTCACTTGGTTCTTAGGTTAAGAGGAGG 170924 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||||||||| || || ||||| ||||| || |||||||| | || Sbjct 170922 ATGCAGATCTTTGTTAAAACCCTTACAGGCAAAACCATCACCCTAGAAGTTGAGAGCTCG 170863 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || ||| | || | ||| ||| ||||| ||||| | || || || || Sbjct 170862 GACACTATCGACAATGTCAAGGC-AAAGATTCAGGACAAGGAAGGGATTCCTCCGGACCA 170804 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || ||||| || || ||||| | || ||| | | |||||||| Sbjct 170803 GCAGAGGCTTATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGAACTCTTGCAGATTACAA 170744 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||| || || | || || ||| | |||||| ||||||| Sbjct 170743 TATCCAGAAAGAATCAACCCTGCACTTGGTTCTTAGGTTGAGAGGAGG 170696 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || ||||| || || | |||||||| | || Sbjct 170466 ATGCAGATCTTCGTCAAGACTCTTACAGGCAAAACCATAACATTGGAAGTTGAAAGCTCG 170407 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| | || |||| | || ||||| ||||| | || || || || Sbjct 170406 GACACTATTGACAATGTCAAGGCAAAGA-TTCAAGACAAGGAAGGGATCCCTCCGGACCA 170348 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | ||||| || |||||||| || || || | || || | | |||||||| Sbjct 170347 GCAGAGACTCATATTCGCTGGCAAACAGCTAGAGGATGGTCGAACGCTTGCAGATTACAA 170288 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 |||||| ||||| || || || ||||| || Sbjct 170287 CATACAGAAAGAATCAACCTTGCATTTGGT 170258 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || ||||| || || | ||||| || | | Sbjct 170238 ATGCAGATATTTGTCAAGACCCTTACCGGTAAAACCATAACATTGGAAGTGGAGAGCTCA 170179 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| ||||| | || | || ||||| ||||| | || || ||||| Sbjct 170178 GACACAATCGACAATGTTAAAGCGAAGA-TTCAAGACAAGGAAGGAATCCCTCCGGATCA 170120 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || ||||||||||| || || || | |||||| | | |||||||| Sbjct 170119 ACAGAGACTCATCTTCGCCGGCAAACAGCTAGAGGATGGTCGCACTCTTGCTGATTACAA 170060 Query 23790 CATACAAAAAGAGTCCAC 23807 |||||| || ||||| || Sbjct 170059 CATACAGAAGGAGTCAAC 170042 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | |||||||| || |||||||| || || || | | Sbjct 170010 ATGCAGATATTTGTCAAGACTTTGACGGGAAAGACCATCACTCTTGAGGTCGAGAGCTCT 169951 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | || | | ||||| ||||| | || || || || Sbjct 169950 GATACGATTGACAATGTCAAGGCCAAGA-TCCAGGACAAGGAAGGGATCCCACCTGACCA 169892 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | ||||||||||||| || || || ||||| | || ||| ||| |||||||| Sbjct 169891 GCAGAGGCTAATATTTGCCGGGAAGCAGCTTGAAGATGGTCGGACTCTAGCGGATTACAA 169832 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| || |||||||| ||| Sbjct 169831 CATTCAGAAAGAGTCGACA 169813 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || || || ||||| || ||||| || || | || Sbjct 171378 ATGCAGATCTTTGTTAAGACTCTTACAGGCAAGACGATAACCCTCGAGGTAGAAAGCTCG 171319 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || || |||||||| | || || || || Sbjct 171318 GACACCATCGACAACGTCAAGGCCAAGATCCAGGATAAAGAAGGAATCCCTCCCGACCAG 171259 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || |||||||| ||||| || || || | || ||| | | |||||||| Sbjct 171258 CAGAGGCTCATCTTTGCCGGTAAACAGCTCGAGGATGGCCGAACTCTGGCTGATTACAAT 171199 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||||||||| || | || || ||| | |||||| |||| || Sbjct 171198 ATCCAAAAAGAGTCAACCCTTCACTTGGTTCTTAGGTTGAGAGGTGG 171152 >seq69 Length=847923 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || || || |||| || || || || ||||| ||||| || | Sbjct 38434 AATGCAGATTTTCGTGAAGACTCTTGCGGGGAAGACAATAACACTCGAGGTTGAATCATC 38493 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 |||||| | || ||| | ||| | || | | ||||| ||||| | ||||| |||| Sbjct 38494 GGACACGATCGACAATGTGAAAGCTAAGA-TCCAGGACAAGGAAGGCATCCCGCCGGATC 38552 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| | || || ||||| |||||||||||||| | || || | | ||| |||| Sbjct 38553 AGCAGCGGCTGATCTTCGCCGGAAAACAACTGGAAGATGGTCGGACACTCGCCGACTACA 38612 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||| || || || || || | ||||| || | ||| | ||||||| Sbjct 38613 ACATCCAGAAGGAATCGACGCTTCATTTGGTCCTTAGGCTTAGAGGAGG 38661 >seq187 Length=227058 Score = 107 bits (118), Expect = 1e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| |||||||| ||||| || || ||||| || || || || ||| Sbjct 169908 AAAATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACAATCACCCTTGAGGTCGAGTCC 169849 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| | || ||| | || | || || ||||| ||||| | || || || Sbjct 169848 TCCGACACCATCGACAATGTCAAGGC-GAAGATCCAGGACAAGGAAGGAATCCCTCCGGA 169790 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| || || || ||||| || || || || |||| |||||| | | ||| || Sbjct 169789 CCAGCAGCGATTGATTTTCGCCGGGAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTA 169730 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 169729 CAACATCCAGAAGGAGTCGAC 169709 >seq65 Length=625306 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || || |||||||| || ||||| | || Sbjct 276264 ATGCAGATTTTCGTGAAGACATTGACCGGTAAGACCATCACTCTGGAGGTTGAGAGCTCG 276323 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||| || ||||| ||||| | || || || || Sbjct 276324 GACACGATTGATAACGTGAAGGCAAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 276383 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || ||||| || || || | ||||| || | ||| |||||| Sbjct 276384 CAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACATTGGCCGACTACAAC 276443 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||||| || | ||||| ||| Sbjct 276444 ATCCAGAAGGAGTCGACTCTTCATTTGGTT 276473 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || ||||| || ||||||||||| || || || || | | Sbjct 275352 ATGCAGATCTTCGTTAAGACTCTCACCGGGAAAACGATCACCCTTGAGGTGGAAAGCTCT 275411 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | || || || || | || || ||||| Sbjct 275412 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAGGGAATCCCACCGGATCA 275470 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | |||| || ||||| || || ||||||||| | || || | ||||||||| Sbjct 275471 GCAGAGGCTAATCTTCGCCGGAAAGCAGTTGGAAGACGGCAGAACATTGGCCGATTACAA 275530 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 275531 CATCCAGAAGGAGTCGAC 275548 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||||||| | ||||| || || || || || || || || | || Sbjct 275808 ATGCAGATCTTCGTTAAAACCTTGACGGGCAAGACCATTACCCTGGAGGTGGAGAGCTCG 275867 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||||||||| | || || ||||| Sbjct 275868 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCGGATCAG 275927 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || ||||| || || || ||||||| | || || | || |||||| Sbjct 275928 CAGAGGCTGATCTTCGCCGGAAAGCAGCTTGAAGACGGCAGAACATTGGCTGACTACAAC 275987 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || ||||| ||| | || || || || Sbjct 275988 ATCCAGAAGGAGTCTACACTTCACTTGGTGTT 276019 >seq73 Length=838620 Score = 96.9 bits (106), Expect = 2e-15 Identities = 115/154 (75%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||||||| |||| |||||||| || | | ||||||||||| || |||||||| Sbjct 422935 GACAAAGAAGGTATACCACCAGATCAGCAAAGGCTGATATTTGCCGGGAAGCAACTGGAG 422994 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | ||| || | | ||||||||||| || |||||||| || | ||| | || || Sbjct 422995 GATGGACGAACACTGGCGGATTACAACATCCAGAAAGAGTCTACTCTTCATCTGGTCTTG 423054 Query 23824 AGGTTGCGAGGAGGATCAGCA-GTTAAAGATGAA 23856 ||| | |||| ||| | || | ||||| |||| Sbjct 423055 AGGCTCAGAGGTGGA--ACCATGATAAAGGTGAA 423086 >seq252 Length=291119 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||||||||||||| | || || || |||||||| | || || || | || Sbjct 179543 ATGCAGATTTTCGTTAAAACCTTGACCGGCAAGACGATCACATTGGAGGTGGAGAGCTCG 179484 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || ||| || ||||| ||||| | || || ||||| Sbjct 179483 GACACGATTGACAACGTGAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAG 179424 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || || ||||| || || || || |||| | || || | ||| |||||| Sbjct 179423 CAAAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACATTGGCCGACTACAAC 179364 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || ||||| ||| | || || || || Sbjct 179363 ATTCAGAAGGAGTCTACACTTCACTTGGTGTT 179332 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||||||||| | ||||| || || ||||| | || ||||| | || Sbjct 179771 ATGCAGATTTTCGTTAAAACGTTGACGGGCAAGACCATCACCTTGGAGGTTGAGAGCTCG 179712 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || |||| | || || ||||| ||||| | || || ||||| Sbjct 179711 GACACAATTGACAACGTTAAGGC-CAAGATCCAGGACAAGGAAGGCATCCCTCCGGATCA 179653 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || ||||| || || || || |||| | || || | |||||||| Sbjct 179652 GCAGAGGTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACATTGGCTGATTACAA 179593 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||||| || | ||| | || | ||| | || ||||| Sbjct 179592 TATCCAGAAGGAGTCGACTCTTCATCTGGTGCTCAGGCTTCGTGGAGG 179545 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| |||||||| || ||||| ||||| |||||||| ||||| || || | Sbjct 180227 ATGCAGATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGTTCT 180168 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || ||||| | || | | || || || || | || || ||||| Sbjct 180167 GACACGATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAGGGAATCCCACCGGATCA 180109 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || ||||| || || ||||||||| || ||| | | ||||||||| Sbjct 180108 GCAGAGGCTTATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTTGCCGATTACAA 180049 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || || || || | ||| | ||| | || | || ||||| Sbjct 180048 CATCCAGAAGGAATCTACTCTCCATCTGGTTCTCAGACTCCGTGGAGG 180001 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || | || || || |||||||| || ||||| || | | Sbjct 179087 ATGCAGATTTTCGTGAAGACTTTAACCGGCAAGACGATCACCCTTGAAGTCGAGAGCTCC 179028 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || || ||||| ||||| | || || || || Sbjct 179027 GACACCATTGATAACGTCAAAGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 178968 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || || || || | ||||| || | |||||||||| Sbjct 178967 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACATTGGCCGATTACAAC 178908 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 178907 ATTCAGAAGGAGTCGAC 178891 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || ||||| || || ||||| || ||||| || || | | Sbjct 179315 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACGATTACACTCGAGGTGGAGAGCTCT 179256 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | || || ||||| | || || ||||| Sbjct 179255 GACACAATCGATAATGTCAAGGCCAAGA-TACAGGATAAGGAAGGCATTCCTCCGGATCA 179197 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || ||||| || || || || || | ||||| || | ||||||||| Sbjct 179196 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACATTGGCCGATTACAA 179137 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| ||||| || Sbjct 179136 CATTCAAAAGGAGTCGAC 179119 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || || || || ||||| || || ||||| | || Sbjct 178859 ATGCAGATTTTTGTGAAGACCTTAACCGGTAAGACCATCACACTGGAGGTTGAGAGCTCG 178800 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || || || || Sbjct 178799 GACACCATTGACAACGTGAAGGCGAAGATCCAAGACAAGGAAGGGATCCCTCCGGACCAG 178740 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || ||||| || || || | ||||| || | || |||||| Sbjct 178739 CAGCGTCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACATTGGCTGACTACAAC 178680 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || ||||| ||||| || | || || ||| Sbjct 178679 ATCCAAAAGGAGTCGACTCTTCACTTGGTT 178650 >seq466 Length=125450 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/154 (73%), Gaps = 3/154 (2%) Strand=Plus/Minus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 |||||||| || |||| || ||||||||| | | |||||||| || |||||||| ||| Sbjct 78665 GACAAAGAGGGGATACCACCGGATCAACAGAGACTGATATTTGCTGGGAAACAACTAGAA 78606 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | || || | | ||||||||||| || |||||||| || | || || || || Sbjct 78605 GATGGTCGGACGCTGGCGGATTACAACATCCAGAAAGAGTCGACTCTTCACTTGGTCTTG 78546 Query 23824 AGGTTGCGAGGAGGATCAGCA-GTTAAAGATGAA 23856 ||| | |||| ||| | || | ||||| |||| Sbjct 78545 AGGCTCAGAGGTGGA--ACCATGATAAAGGTGAA 78514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337981719278144