Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=30551617 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 101758 ATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCC 101817 ||||||||||||||| || || || | ||| ||||||||||||||||| || | || Sbjct 6230736 ATGAGCAATCATGCATGTCAAGAGGGCATAAGATGCAATGTTAAATGGCACACCCAGGCC 6230795 Query 101818 CATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 ||| ||||| |||| ||||||| |||||| || | || |||| Sbjct 6230796 CATGTCAGCAGATCGCTGATACATTTGACATGATAACTCCCCAT 6230839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361079268248801