Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq38594 129 3e-25 seq38591 125 4e-24 seq29326 125 4e-24 seq38614 122 5e-23 seq33273 122 5e-23 seq3 122 5e-23 seq34213 120 2e-22 seq7 120 2e-22 seq38641 118 6e-22 seq2060 118 6e-22 seq38476 116 2e-21 seq27113 116 2e-21 seq4 116 2e-21 seq38676 114 7e-21 seq6 114 7e-21 seq34340 113 2e-20 seq33625 113 2e-20 seq4556 113 2e-20 seq2251 113 2e-20 seq28154 111 8e-20 seq2 111 8e-20 seq28474 109 3e-19 seq5 107 1e-18 seq1 105 3e-18 seq28206 104 1e-17 >seq38594 Length=853971 Score = 129 bits (142), Expect = 3e-25 Identities = 82/90 (91%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||| |||||| |||||||||||||| | | |||||||| |||||||||||||||||||| Sbjct 163651 TAAAAAAAAAACAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCA 163710 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 163711 CGACGCTCTAACCAACTGAGCTAATGGGCC 163740 >seq38591 Length=161506 Score = 125 bits (138), Expect = 4e-24 Identities = 89/102 (87%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 11428 GAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 |||||||| || |||||||| | ||||||||||| | | |||||||| |||||||| Sbjct 52623 GAAATATACAA--AATAAAAACGAATATTGGCCCATGCAGGTCTCGAACCTGCGACCTTC 52680 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| |||||||||||||||||||| Sbjct 52681 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 52722 >seq29326 Length=5656 Score = 125 bits (138), Expect = 4e-24 Identities = 83/93 (89%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||| ||||||| | ||| ||||||||| | | |||||||| ||||||||||||||||| Sbjct 5478 AATTTATAAAAATTTAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 5419 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 5418 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 5386 >seq38614 Length=378808 Score = 122 bits (134), Expect = 5e-23 Identities = 90/106 (85%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCA-----AATTGGCCCATGAAAGGATCGAACCTTCGAC 11483 |||||| | ||||||||||| | |||||||||||| | | |||||||| |||| Sbjct 241673 AAATATTAATTTAATAAAAAAAAACAAAAAATTGGCCCATGCAGGTCTCGAACCTGCGAC 241732 Query 11484 CTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 241733 CTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 241778 >seq33273 Length=1805 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| || ||||||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 724 AAAATATAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 665 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 664 GCTCTAACCAACTGAGCTAATGGGCC 639 >seq3 Length=31061273 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| || ||||||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 12729598 AAAATATAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 12729657 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 12729658 GCTCTAACCAACTGAGCTAATGGGCC 12729683 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 11444 AAAAAATC---AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| ||||||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 21129104 AAAAAATCGAAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 21129163 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 21129164 GACGCTCTAACCAACTGAGCTAATGGGCC 21129192 Score = 116 bits (128), Expect = 2e-21 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11449 ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCT 11508 || ||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| Sbjct 13912050 ATAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCT 13911991 Query 11509 RACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| Sbjct 13911990 AACCAACTGAGCTAATGGGCC 13911970 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||||||| | | |||||||| |||||||| |||||||||||||||||||| || Sbjct 7756717 AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCACGTTATTAGCACGACGCTCTAAC 7756658 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 7756657 CAACTGAGCTAATGGGCC 7756640 >seq34213 Length=3359 Score = 120 bits (132), Expect = 2e-22 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 11428 GAAATATAGAATTAATA-AAAAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCT 11485 |||| | | |||||| | |||||| | || ||||||||| | | |||||||| |||||| Sbjct 485 GAAAAAAATAATTAAAATAAAAATAATAAATGGCCCATGCAGGTCTCGAACCTGCGACCT 544 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 545 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 588 >seq7 Length=30551617 Score = 120 bits (132), Expect = 2e-22 Identities = 81/90 (90%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| ||| ||||||||| | | |||||||| ||||||||||||||||||||| Sbjct 3859414 ATAAAAAATAAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 3859355 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||| Sbjct 3859354 GACGCTCTAACCAACTGAGCTAATGGGCCG 3859325 Score = 107 bits (118), Expect = 1e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 12833081 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 12833140 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 12833141 CAACTGAGCTAATAGGCC 12833158 Score = 87.8 bits (96), Expect = 9e-13 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | | ||||||||| | | | |||| | |||| |||||||||||||||| || Sbjct 4913924 AAAAATTAGAATGGCCCATGTAGGTCTGGAACATGCGACATTCGCGTTATTAGCACAACT 4913865 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||| |||||||||||||| Sbjct 4913864 CTCTAACCAATTGAGCTAATGGGCC 4913840 >seq38641 Length=308952 Score = 118 bits (130), Expect = 6e-22 Identities = 81/91 (89%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATC--AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 || ||||||| ||||||||||||| | | |||||||| ||||||||||||||||||| Sbjct 224653 AAAAAAAAATTTAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGC 224594 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 224593 ACGACGCTCTAACCAACTGAGCTAATGGGCC 224563 >seq2060 Length=1736 Score = 118 bits (130), Expect = 6e-22 Identities = 80/89 (90%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||||| |||||||| | | |||||||| ||||||||||||||||||||| Sbjct 2 AAAAAAAAAACAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 60 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 61 GACGCTCTAACCAACTGAGCTAATGGGCC 89 >seq38476 Length=283411 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 145728 AAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 145669 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 145668 CAACTGAGCTAATGGGCC 145651 >seq27113 Length=751 Score = 116 bits (128), Expect = 2e-21 Identities = 77/85 (91%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||||| |||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 335 AAAAACCAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 393 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 394 CTCTAACCAACTGAGCTAATGGGCC 418 >seq4 Length=28907061 Score = 116 bits (128), Expect = 2e-21 Identities = 87/102 (85%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 11439 TTAATAAAAAA--TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| |||||| | ||| ||||||||| | | |||||||| ||||||||||||||||| Sbjct 892366 TTATTAAAAAGGTTAAAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTA 892307 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGACGAT 11538 |||||||||||| ||||||||||||||||||||| || ||| Sbjct 892306 GCACGACGCTCTAACCAACTGAGCTAATGGGCCGATGATGAT 892265 Score = 111 bits (122), Expect = 8e-20 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| ||| |||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 14186593 AAAAATATAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 14186535 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 14186534 CTCTAACCAACTGAGCTAATGGGCC 14186510 >seq38676 Length=50122 Score = 114 bits (126), Expect = 7e-21 Identities = 83/95 (87%), Gaps = 4/95 (4%) Strand=Plus/Minus Query 11439 TTAATAAAAAATC--AA--ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 ||||| |||||| || ||||||||||| | | |||||||| ||||||||||||||| Sbjct 48514 TTAATCAAAAATATTAATCATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTAT 48455 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||||||||| Sbjct 48454 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 48420 >seq6 Length=22682783 Score = 114 bits (126), Expect = 7e-21 Identities = 79/89 (89%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||| || |||| |||||||| | | |||||||| ||||||||||||||||||||| Sbjct 3062526 AATAAATAAAAAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 3062468 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 3062467 GACGCTCTAACCAACTGAGCTAATGGGCC 3062439 Score = 109 bits (120), Expect = 3e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 22564608 AAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACC 22564667 Query 11513 AACTGAGCTAATGGGCC 11529 ||||||||||||||||| Sbjct 22564668 AACTGAGCTAATGGGCC 22564684 >seq34340 Length=3245 Score = 113 bits (124), Expect = 2e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 337 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 278 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 277 ACTGAGCTAATGGGCC 262 >seq33625 Length=2419 Score = 113 bits (124), Expect = 2e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1744 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 1803 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 1804 ACTGAGCTAATGGGCC 1819 >seq4556 Length=1358 Score = 113 bits (124), Expect = 2e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 309 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 250 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 249 ACTGAGCTAATGGGCC 234 >seq2251 Length=1540 Score = 113 bits (124), Expect = 2e-20 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1142 ATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 1201 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 1202 ACTGAGCTAATGGGCC 1217 >seq28154 Length=107423 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 89154 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 89095 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 89094 CTGAGCTAATGGGCC 89080 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 90154 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 90095 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 90094 CTGAGCTAATGGGCC 90080 Score = 102 bits (112), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| | | |||||| | |||||||||||||||||||||||||||| ||||| Sbjct 89553 TTGGCCCATGCAGGTCTCGAACTTATGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 89494 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 89493 CTGAGCTAATGGGCC 89479 >seq2 Length=32560536 Score = 111 bits (122), Expect = 8e-20 Identities = 71/78 (91%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 23979265 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 23979206 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 23979205 CAACTGAGCTAATGGGCC 23979188 >seq28474 Length=7482 Score = 109 bits (120), Expect = 3e-19 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 || |||||||||| | | || ||||| ||||||||||||||||||||||||||||| || Sbjct 4613 AAGTTGGCCCATGCAGGTCTCTAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 4554 Query 11512 CAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||| Sbjct 4553 CAACTGAGCTAATGGGCCG 4535 >seq5 Length=15272566 Score = 107 bits (118), Expect = 1e-18 Identities = 79/90 (88%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAA-CCTTCGACCTTCGCGTTATTAGCA 11499 |||||||| | ||| |||||||| | | ||||| ||| |||||||||||||||||||| Sbjct 9150627 AATAAAAAGTAGAAT-GGCCCATGCAGGTCTCGAAACCTGCGACCTTCGCGTTATTAGCA 9150569 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 9150568 CGACGCTCTAACCAACTGAGCTAATGGGCC 9150539 >seq1 Length=28142018 Score = 105 bits (116), Expect = 3e-18 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 || ||||| |||||||| | | |||||||| |||||||||||||||||||||||||||| Sbjct 10356307 AAACAAAT-GGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTC 10356249 Query 11508 TRACCAACTGAGCTAATGGGCC 11529 | ||||||||||||||| |||| Sbjct 10356248 TAACCAACTGAGCTAATAGGCC 10356227 Score = 102 bits (112), Expect = 4e-17 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 || ||||| |||||||| | | |||||| | |||||||||||||||||||||||||||| Sbjct 10363128 AAACAAAT-GGCCCATGCAGGTCTCGAACTTGCGACCTTCGCGTTATTAGCACGACGCTC 10363070 Query 11508 TRACCAACTGAGCTAATGGGCC 11529 | ||||||||||||||| |||| Sbjct 10363069 TAACCAACTGAGCTAATAGGCC 10363048 Score = 96.9 bits (106), Expect = 2e-15 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 11458 GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTG 11517 ||||||| ||| || ||||| |||||||||| |||||||||||||||||| |||||||| Sbjct 14993888 GCCCATGCAAGTCTCAAACCTGCGACCTTCGCATTATTAGCACGACGCTCTAACCAACTG 14993947 Query 11518 AGCTAATGGGCC 11529 |||||||| ||| Sbjct 14993948 AGCTAATGAGCC 14993959 >seq28206 Length=95364 Score = 104 bits (114), Expect = 1e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | | |||||| ||||||||||||||||||||||||||||| |||||| Sbjct 67598 TGGCCCATGCAGGTCTTGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 67657 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 67658 TGAGCTAATGGGCC 67671 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261366747430876