Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq28674 114 1e-20 seq28626 114 1e-20 seq9364 109 5e-19 seq4 102 7e-17 seq3 102 7e-17 seq28803 100 2e-16 seq30363 91.5 1e-13 seq6 87.8 2e-12 seq23360 82.4 7e-11 >seq1 Length=28142018 Score = 120 bits (132), Expect = 3e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||||||||||||||| |||| || | || |||||| || Sbjct 1586637 ATGCAGATATTTGTCAAGACTTTGACCGGTAAGACCATAACCTTGGAGGTGGAGAGCTCA 1586578 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| || || ||||| ||||| || || | Sbjct 1586577 GACACCATTGA--CAATGTCAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCAGATC 1586520 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | || ||||| ||||||||||| ||||||| | || | | ||||||| Sbjct 1586519 AGCAGAGGTTGATCTTTGCAGGCAAACAATTGGAAGATGGAAGGACCCTTGCGGATTACA 1586460 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || || ||||| || || | ||||| Sbjct 1586459 ATATCCAGAAGGAGTCCACTCTTCACCTTGTGCT 1586426 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | ||||| || ||||||| | || |||||| ||| Sbjct 1587387 ATGCAAATCTTCGTGAAAACACTCACCGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 1587328 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| |||| || | || ||||| ||||| ||||| || || Sbjct 1587327 GACACCATCGACAACGTCA---AAGCCAAGATCCAG-GACAAGGAAGGAATTCCTCCGGA 1587272 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| || || | || || ||||| || || || ||||| | | ||| | | ||||| Sbjct 1587271 CCAGCAACGTCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGAAGGACTCTTGCTGATTA 1587212 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || || |||||||| ||| | || || Sbjct 1587211 CAATATTCAGAAGGAGTCCACGCTTCATCTTGTTCT 1587176 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || ||||||| | || || || ||| Sbjct 1587159 ATGCAGATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCCTTGAGGTTGAAAGCTCT 1587100 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| ||||| || || || ||||| Sbjct 1587099 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAG 1587040 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||| || || | || || | || ||| ||| |||||||||| Sbjct 1587039 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGTACTTTGGCCGATTACAAT 1586980 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || || || || || Sbjct 1586979 ATCCAGAAGGAGTCAACCCTCCA 1586957 >seq28674 Length=75340 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| ||||| || || | || || | || |||||| || Sbjct 21043 AATGCAGATTTTTGTGAAGACGTTGACGGGAAAGACGATTACTTTGGAGGTGGAGAGTTC 21102 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| ||||| || ||||| | || | ||| || || || |||||||||||||| | Sbjct 21103 TGATACTATTGATAATGTGAAGGCGAAGATTCAG-GATAAGGAGGGGATTCCACCTGATC 21161 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||| || ||||| | ||||||| | ||| | | ||||| | Sbjct 21162 AGCAGCGATTGATCTTTGCTGGTAAACAGCTTGAAGATGGAAGGACTCTTGCTGATTATA 21221 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||||| |||||||| ||||| || | || || ||||| Sbjct 21222 ATATTCAGAAAGAATCTACGCTTCACCTTGTTCTCAGGCT 21261 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 12/216 (6%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | ||||| ||| |||| || | || || || || || Sbjct 20592 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTTGAATCCTCC 20651 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| |||| |||| || || || ||||| |||||||| || Sbjct 20652 GACACCATCGACAACGTCA---AAGCCAAAATCCAA-GATAAGGAAGGAATTCCACCAGA 20707 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | || || ||||| |||||| | ||||| || | ||| Sbjct 20708 CCAACAGCGTCTCATCTTCGCCGGAAAACAACTCGAAGA----CGGCCGNNNNNNNNTTA 20763 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| ||||| ||| | || || Sbjct 20764 TAACATCCAAAAAGAATCAACGCTCCATCTCGTTCT 20799 >seq28626 Length=87040 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| ||||| || || | || || | || |||||| || Sbjct 42364 AATGCAGATTTTTGTGAAGACGTTGACGGGGAAGACGATTACTCTTGAGGTGGAGAGTTC 42305 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| ||||| || ||||| | || | ||| || || || |||||||||||||| | Sbjct 42304 TGATACTATTGATAATGTGAAGGCCAAGATTCAG-GATAAGGAGGGGATTCCACCTGATC 42246 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || |||||||| ||||| | || |||| | ||| | | ||||| | Sbjct 42245 AACAGCGATTGATCTTTGCCGGTAAACAGCTTGAGGATGGATGAACTCTTGCTGATTATA 42186 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||||| |||||||| || || || | || || ||||| Sbjct 42185 ATATTCAGAAAGAATCTACACTTCACCTTGTTCTCAGGCT 42146 Score = 113 bits (124), Expect = 4e-20 Identities = 168/236 (71%), Gaps = 8/236 (3%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || || || | ||||| ||| |||| || | || || || || Sbjct 42594 ACCATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCC 42535 Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || || || ||||| |||| |||| |||| || ||||| ||||| ||||| || Sbjct 42534 TCCGATACCATCGACAACGTCA---AAGCCAAAATCCAA-GACAAGGAAGGAATTCCTCC 42479 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||| || ||||| | || ||||| || || ||||| ||||||| | ||| | | || Sbjct 42478 TGATCAGCAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGGACTCTTGCGGA 42419 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||| ||||| || ||||| || ||||||||||| || || ||| | | || |||| Sbjct 42418 TTATAATATCCAGAAAGAGTCTACGCTACATTTGGTTCTTAGGTTGCGCGGTGGAA 42363 >seq9364 Length=1264 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || || ||||||| |||| |||||| ||| Sbjct 510 ATGCAAATCTTTGTGAAGACTCTCACTGGAAAGACCATCACCCTCGAGGTGGAGAGTTCT 451 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | || || | ||| |||||||| || || ||||| ||| Sbjct 450 GACACCATAGA--CAATGTCAAGGCCAAGATTCAA-GACAAAGAGGGAATCCCACCAGAC 394 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| || || || | ||||||| | || | | |||||| Sbjct 393 CAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACCTTAGCTGATTAC 334 Query 25176 AATATTCAAAAAGAATCCACGCTACAT 25202 || || || ||||||||||| || ||| Sbjct 333 AACATCCAGAAAGAATCCACTCTTCAT 307 >seq4 Length=28907061 Score = 102 bits (112), Expect = 7e-17 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | ||||| || | ||||| | || |||||| ||| Sbjct 27565227 ATGCAAATATTTGTTAAGACCCTCACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTCT 27565286 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| |||||||| || || ||||| ||| Sbjct 27565287 GATACCATTGA--CAATGTCAAGGCCAAGATTCAA-GACAAAGAGGGAATCCCACCAGAC 27565343 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| || || || | ||||||| || || | | |||||| Sbjct 27565344 CAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGGACCTTAGCTGATTAC 27565403 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || ||||||||||| || || Sbjct 27565404 AACATCCAGAAAGAATCCACTCTTCA 27565429 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || |||||| ||| Sbjct 27565455 ATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 27565514 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || || || |||||||| ||||| || || | Sbjct 27565515 GACACCATAGA--CAATGTCAAGGCCAAGATACAAGATAAAGAAGGTATTCCCCCAGATC 27565572 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || | ||||||||||| || || | ||||||| | || ||| ||||| | Sbjct 27565573 AGCAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCTGATTATA 27565632 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || ||||| || || || || Sbjct 27565633 ACATCCAGAAAGAGTCAACTCTTCA 27565657 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || |||| ||| | || || || || Sbjct 27565911 ATGCAGATCTTTGTGAAGACTTTGACTGGAAAGACCATTACATTGGAGGTAGAAAGTTCA 27565970 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || ||||| |||| | ||||||| || ||||| || || || ||||| || Sbjct 27565971 GATACGATCGATAATGTCA---AGGCAAAAATACA-AGACAAGGAGGGAATCCCACCAGA 27566026 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || | || ||||| ||||| ||||| || |||| | || | | || || Sbjct 27566027 TCAGCAGAGGTTGATCTTTGCTGGCAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTA 27566086 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| ||||| || || || || || || Sbjct 27566087 CAACATTCAGAAGGAGTCTACTCTTCA 27566113 >seq3 Length=31061273 Score = 102 bits (112), Expect = 7e-17 Identities = 148/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | || || |||| || ||||| || Sbjct 8017443 ATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATAACCCTCGAGGTTGAGTCTTCA 8017502 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| |||| || | || ||||| ||||| ||||||||||| Sbjct 8017503 GACACAATCGACAACGTCA---AAGCCAAGATCCAA-GACAAGGAAGGAATTCCACCTGA 8017558 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| || || | || || ||||| || || || ||||||| |||||| | | ||| || Sbjct 8017559 CCAGCAACGTCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACTCTCGCCGACTA 8017618 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || |||||||| || || || Sbjct 8017619 CAACATCCAGAAAGAATCAACTCTTCA 8017645 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || | || || | || || ||| || Sbjct 12367088 ATGCAGATTTTCGTGAAGACTCTTACCGGAAAGACTATTACCTTGGAGGTAGAGAGCTCA 12367147 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || ||||| || || ||||||||||| ||||| || ||||| Sbjct 12367148 GACACTATTGACAATGTGAAGACCAAGATACAGGACAAAGAAGGTATTCCCCCAGACCAG 12367207 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||| || || || | ||||||| || ||| ||| ||||| || Sbjct 12367208 CAAAGGTTGATATTTGCTGGAAAGCAGCTTGAAGATGGCCGGACTTTGGCTGATTATAAC 12367267 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| |||||||| || | || || | || || ||||| Sbjct 12367268 ATTCAGAAAGAGTCCACGCTTCACCTTGTCCTTCGTCTGAGGGGAGG 12367314 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || |||| || | || || || || Sbjct 12366632 ATGCAGATTTTTGTTAAGACGCTTACAGGCAAGACCATTACTTTGGAGGTAGAAAGCTCA 12366691 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || || ||||| || || ||||| || ||||| Sbjct 12366692 GACACAATTGACAATGTGAAGGCCAAGATACAAGACAAGGAGGGTATTCCTCCAGACCAG 12366751 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | ||||||||||| || || | ||||||| || || ||| ||||||||| Sbjct 12366752 CAAAGGTTGATTTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTACAAC 12366811 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||| | || || Sbjct 12366812 ATCCAGAAGGAATCCACCCTTCATCTTGTCCT 12366843 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| ||||| || || |||| || | || || ||| || Sbjct 12366860 ATGCAAATCTTTGTAAAGACATTGACAGGCAAGACCATTACTTTGGAGGTAGAGAGCTCA 12366919 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || || |||||||| || || || || ||||| Sbjct 12366920 GACACAATTGACAATGTGAAGGCTAAGATACAAGACAAAGAGGGTATCCCTCCAGACCAG 12366979 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | |||||||| || || || | ||||||| | ||| | | || || || Sbjct 12366980 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACTCTTGCTGACTATAAC 12367039 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || ||||| || || || || Sbjct 12367040 ATCCAGAAAGAGTCAACTCTTCA 12367062 >seq28803 Length=52646 Score = 100 bits (110), Expect = 2e-16 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || ||||||| | || |||||| ||| Sbjct 33767 ATGCAGATCTTTGTTAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 33708 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | || || | ||| |||||||| || || ||||| ||| Sbjct 33707 GACACCATAGA--CAATGTCAAGGCCAAGATTCAA-GACAAAGAGGGAATCCCACCAGAC 33651 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| || || || | ||||||| | || | | |||||| Sbjct 33650 CAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACCTTAGCTGATTAC 33591 Query 25176 AATATTCAAAAAGAATCCACGCTACAT 25202 || || || ||||||||||| || ||| Sbjct 33590 AACATCCAGAAAGAATCCACTCTTCAT 33564 >seq30363 Length=1936 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 || || || |||||||||||| | ||||| || | || |||||||| |||||| | ||| Sbjct 1340 GATAAGGAGGGGATTCCACCTAATCAACAACGATTGATCTTTGCCGGTAAACAACTTGAA 1399 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| || ||| | | |||||| |||||||| |||||||| || | || | || || Sbjct 1400 GATGGACGGACTCTTGCCGATTATAATATTCAGAAAGAATCTACAGTTCACCTTGTTCTT 1459 Query 25212 AGGCT 25216 ||||| Sbjct 1460 AGGCT 1464 >seq6 Length=22682783 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| || || || ||||| | ||||| ||||| || ||| | ||||||| || Sbjct 2585835 AGGAATTCCCCCGGATCAGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGATGGACG 2585894 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 |||| ||| ||||||||||| || || ||||| || || ||| | || || ||||| | Sbjct 2585895 CACTTTGGCTGATTACAATATCCAGAAGGAATCAACTCTTCATCTTGTTCTCAGGCTTCG 2585954 Query 25220 AGGAGGAA 25227 || |||| Sbjct 2585955 TGGTGGAA 2585962 >seq23360 Length=816 Score = 82.4 bits (90), Expect = 7e-11 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141 |||| ||| || || || |||||||||||||| || || | | || ||||||| || Sbjct 315 AAAATTCAG-GATAAGGATGGGATTCCACCTGATCAGCAACTATTGATCTTTGCCGATAA 257 Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 |||| | ||||||| || ||| | | |||||| |||||||| ||| |||| || || || Sbjct 256 ACAACTTGAAGATGGACGGACTCTTGCCGATTATAATATTCAGAAAAAATCTACACTTCA 197 Query 25202 TTTAGTGCTAAGGCT 25216 | || || ||||| Sbjct 196 CCTTGTTCTTAGGCT 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433121764444565