Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq28674 150 4e-31 seq28626 150 4e-31 seq3 143 6e-29 seq1 123 6e-23 seq4 114 3e-20 seq28803 111 4e-19 seq5139 96.9 8e-15 >seq28674 Length=75340 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || | ||||| || | ||||| ||| ||||| ||||||||||| || || Sbjct 21043 TCCACCACGTAACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGATATTATAATCAGC 20984 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || ||||| ||||| |||||||| ||||||| || |||||| | || Sbjct 20983 AAGAGTTCTACCATCTTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGAGG 20924 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||||| || || || || |||||||| || || | || ||||| || Sbjct 20923 AATTCCTTCTTTATCTTGAATCTTTGCCTTCACGTTGTCGATTGTGTCAGAAGATTCGAC 20864 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||| ||||| || || || || || || |||||||| || ||||| Sbjct 20863 TTCGAGTGTGATGGTTTTGCCAGTTAGGGTTTTGACGAAGATTTGCAT 20816 Score = 145 bits (160), Expect = 2e-29 Identities = 173/236 (73%), Gaps = 5/236 (2%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || |||||||| | ||| |||||||||||| ||||| Sbjct 20818 CATG-CCGCCGCGGAGACGGAGAACGAGATGGAGCGTTGATTCTTTTTGGATGTTATAAN 20760 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || |||||||| | ||||||||| |||||||| ||||||||||| Sbjct 20759 NNNNNNNCGG----CCGTCTTCGAGTTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTG 20704 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||| |||||||| ||||| |||||||| ||||| ||||| || || | ||| |||| Sbjct 20703 GTGGAATTCCTTCCTTATCTTGGATTTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATT 20644 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || || || || || || || ||||| || || || ||||| |||||||| ||| Sbjct 20643 CAACCTCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATGATG 20588 >seq28626 Length=87040 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| | ||||| || | ||| | ||| ||||| ||||||||||| || || Sbjct 42364 TCCACCGCGCAACCTAAGAACCAAATGTAGCGTAGACTCTTTCTGGATATTATAATCCGC 42423 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || ||||| ||||| || ||||| ||||||| ||||| ||| | || Sbjct 42424 AAGAGTCCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGG 42483 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| || || |||||||| ||||| ||||| || || | |||| |||||||| Sbjct 42484 AATTCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTGTCGATGGTATCGGAGGATTCTAC 42543 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || || || ||||| |||||||| Sbjct 42544 CTCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 42591 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || || |||| || |||||| || |||||||| || || Sbjct 42137 CCACCACGGAGCCTGAGAACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAATCAGCA 42196 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | ||||| || || ||||||| ||||||||| | ||| Sbjct 42197 AGAGTTCATCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCGCTGTTGATCAGGTGGA 42256 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || |||||||| || || || ||||| || || |||| ||| ||| || Sbjct 42257 ATCCCCTCCTTATCCTGAATCTTGGCCTTCACATTATCAATAGTATCAGAACTC---TCC 42313 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||||||||| |||| ||||| || || ||||||||| Sbjct 42314 ACCTCAAGAGTAATCGTCTTCCCCGTCAACGTCTTCACAAAAATCTGCATT 42364 >seq3 Length=31061273 Score = 143 bits (158), Expect = 6e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || ||||||||||| ||||| || ||||| || || ||||| ||||| Sbjct 8017634 TTCTTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCTTCCAACTGCTTTCCGGCGAA 8017575 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||| || || | ||| |||||||| || || ||||| || ||||| ||||| Sbjct 8017574 GATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACGTT 8017515 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || ||||| || ||||||||||| || || || || || Sbjct 8017514 GTCGATTGTGTCTGAAGACTCAACCTCGAGGGTTATCGTCTTCCCTGTTAGGGTTTTCAC 8017455 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 8017454 GAAGATCTGCAT 8017443 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||| | ||| || |||||||| || || || || Sbjct 12366174 CCACCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 12366115 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || || ||||||||||| || |||| Sbjct 12366114 AGGGTACGCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGATGGG 12366055 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 || ||||| ||||| || || || || || || || ||||| | || || | ||| | Sbjct 12366054 ATCCCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCTATGGTAT--CTGAACTCTCAA 12365997 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||| || | ||||| || || || | ||| || || || ||||| Sbjct 12365996 CTTCGAGAGTAACGGTCTTGCCTGTAAGCGCCTTAACAAAGATTTGCAT 12365948 >seq1 Length=28142018 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || |||| ||| || || || || || ||||| || Sbjct 1586183 CCACCACGAAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 1586242 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || || ||||| |||||||||||||| | ||| ||| | |||| Sbjct 1586243 AGGGTCCTTCCATCCTCCAACTGTTTCCCTGCGAAGATCAGCCTCTGCTGATCAGGTGGG 1586302 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| |||||||| ||||| || ||||| || || || | ||| |||| || Sbjct 1586303 ATACCTTCCTTATCCTGAATTTTGGCCTTCACATTATCAATGGTATCTGAGCTC---TCC 1586359 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || ||||| || |||| |||||||| || |||||||| Sbjct 1586360 ACCTCCAAGGTTATGGTCTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1586409 Score = 120 bits (132), Expect = 7e-22 Identities = 159/218 (73%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || |||| ||| || || |||||||| || || || || || | ||| ||| Sbjct 1586426 AGCACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTTCCATCT 1586485 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || |||||||| ||||| ||||||| | ||| ||| |||||| || ||||| ||| Sbjct 1586486 TCCAATTGTTTGCCTGCAAAGATCAACCTCTGCTGA---TCTGGGGGAATACCTTCCTTA 1586542 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435 |||||||| || || || || || || || | || |||| || || || | || Sbjct 1586543 TCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTC---TCCACCTCCAAGGTT 1586599 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||| ||||||||| ||||||||||| Sbjct 1586600 ATGGTCTTACCGGTCAAAGTCTTGACAAATATCTGCAT 1586637 Score = 109 bits (120), Expect = 1e-18 Identities = 144/197 (73%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| || ||||| | || || ||||| || | || ||||| || ||| Sbjct 1586969 TCCTTCTGGATATTGTAATCGGCCAAAGTACGGCCGTCCTCAAGCTGCTTTCCGGCAAAG 1587028 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| || |||||| |||||||| || |||||||| || || || ||| Sbjct 1587029 ATCAACCTCTGCTGG---TCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACG 1587085 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || ||| ||| || || || ||||| ||||| || || |||||| Sbjct 1587086 TTGTCGATGGTGTCAGAGCT---TTCAACCTCAAGGGTGATGGTCTTTCCTGTGAGAGTC 1587142 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 1587143 TTGACGAAGATCTGCAT 1587159 >seq4 Length=28907061 Score = 114 bits (126), Expect = 3e-20 Identities = 170/238 (71%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||| | || || |||||||| || || ||||| Sbjct 27565225 CCACCACGGAGACGGAGCACCAAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCA 27565166 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| || || ||||||||||| || |||| Sbjct 27565165 AGGGTACGCCCGTCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGG 27565106 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 || ||||| ||||| || || || || || || || ||||| | || || | ||| | Sbjct 27565105 ATCCCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCTATGGTAT--CTGAACTCTCAA 27565048 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT-TATGTTAT 288481 |||| || ||||| ||||| || || || ||||| ||||| || ||||| ||| |||| Sbjct 27565047 CTTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCATCTATATTAT 27564990 Score = 87.8 bits (96), Expect = 4e-12 Identities = 139/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| ||||| || || || || | || ||||| | || ||||| || || Sbjct 27565645 TCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAA 27565586 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| ||| |||||| || ||||||||||| || || || || || || Sbjct 27565585 ATCAACCTCTGCTGA---TCTGGGGGAATACCTTCTTTATCTTGTATCTTGGCCTTGACA 27565529 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || ||||| | || ||| || || || || ||||| ||||| || || || ||| Sbjct 27565528 TTGTCTATGGTGTCAGAACTC---TCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTC 27565472 Query 288457 TTGACGAATATCTGCAT 288473 || || || |||||||| Sbjct 27565471 TTAACAAAGATCTGCAT 27565455 >seq28803 Length=52646 Score = 111 bits (122), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||||| || || ||||| || || || ||||| Sbjct 33769 CCACCACGGAGACGGAGCACCAAATGAAGGGTTGACTCCTTTTGTATGTTGTAATCGGCA 33828 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || ||||| || || ||||||||||| || |||| Sbjct 33829 AGGGTACGCCCGTCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGG 33888 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 || ||||| ||||| || || || || || || || ||||| | || || | ||| | Sbjct 33889 ATCCCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCTATGGTAT--CTGAACTCTCAA 33946 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||| || ||||| ||||| || || || ||||| ||||| || ||||| Sbjct 33947 CTTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 33995 Score = 104 bits (114), Expect = 6e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | | || ||||||| || ||| || || || || ||||| || Sbjct 32533 CCACCACGAAGGCGCAACACAAGATGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGCA 32592 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || ||||| || || || ||||||| | ||| ||| |||| Sbjct 32593 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 32652 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || ||||| ||||| || || || || || || | ||| |||||| Sbjct 32653 ATTCCTTCCTTGTCCTGTATTTTTGCCTTGACATTATCGATTGTATCAGAACTTTCTACC 32712 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || |||||||| |||| ||||| || || |||||||| Sbjct 32713 TCCAAAGTAATGGTCTTCCCTGTCAAGGTCTTCACAAAGATCTGCAT 32759 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351 || || ||||| || || || | ||| || || ||||| || || || ||||||| | | Sbjct 8844 ATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTC 8785 Query 288352 TGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAA 288411 || ||| |||||||||||| || ||||| ||||| || || || || || || | | Sbjct 8784 TGCTGATCTGGTGGGATTCCTTCCTTGTCCTGTATTTTTGCCTTAACATTATCGATTGTA 8725 Query 288412 TCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 || |||||| || | || || |||||||| |||| |||||| || || |||||| Sbjct 8724 TCTGAACTTTCTACCTCCAAAGTAATGGTCTTCCCTGTCAAAGTCTTCACAAAGATCTGC 8665 Query 288472 AT 288473 || Sbjct 8664 AT 8663 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| || || || | ||| || || ||||| || || || ||| Sbjct 38782 TCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAG 38841 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| |||||||||||| || ||||| ||||| || || || || Sbjct 38842 ATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGTATTTTTGCCTTGACATTA 38901 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| |||||| || | || || |||||||| |||| ||||| || Sbjct 38902 TCGATTGTATCAGAACTTTCTACCTCCAATGTAATGGTCTTCCCTGTCAACGTCTTCACA 38961 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 38962 AAGATCTGCAT 38972 >seq5139 Length=1344 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| |||| | || || | ||| | ||| || |||||||| || || ||||| Sbjct 1323 CCACCATGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCGGCA 1264 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || || ||||||||||| || |||| Sbjct 1263 AGGGTACGCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGG 1204 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 | ||||| ||||| || || || || || || || ||||| | || || | ||| | Sbjct 1203 TTCCCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCTATGGTAT--CTGAACTCTCAA 1146 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||| | ||| ||||| || || || ||||| ||||| || || || Sbjct 1145 CTTCGAGAGCGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGTAT 1097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179064170611578