Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 165 2e-35 seq3 143 6e-29 seq9364 136 9e-27 seq4 129 1e-24 seq28803 123 6e-23 seq28674 114 3e-20 seq6 113 1e-19 seq5139 109 1e-18 seq28626 91.5 3e-13 seq2 87.8 4e-12 >seq1 Length=28142018 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || |||||||| || | ||||| ||||| | ||||||||| ||| Sbjct 1587176 AGAACAAGATGAAGCGTGGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCTTCCGTCT 1587235 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||| Sbjct 1587236 TCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCCGGAGGAATTCCTTCCTTGTCC 1587295 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || ||| |||| |||||| | | || || || | ||||| ||| Sbjct 1587296 TGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTC 1587355 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| |||||||| || ||||| Sbjct 1587356 TTTCCGGTGAGTGTTTTCACGAAGATTTG 1587384 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||||||||| || |||||||| |||| ||||| || |||||||| Sbjct 1586939 CGAAGACGCAACACAAGGTGGAGGGTTGACTCCTTCTGGATATTGTAATCGGCCAAAGTA 1586998 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||||||||| ||||| | | ||||||||| || |||||| Sbjct 1586999 CGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATTCCT 1587058 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | |||| || || | Sbjct 1587059 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCAACCTCAAGG 1587118 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || || || || Sbjct 1587119 GTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATCTG 1587156 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || |||||||| || | |||||||||||| | ||| Sbjct 1586189 CGAAGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTC 1586248 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| ||| || || |||||||| || | |||||| || || || ||| Sbjct 1586249 CTTCCATCCTCCAACTGTTTCCCTGCGAAGATCAGCCTCTGCTGATCAGGTGGGATACCT 1586308 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||| || |||||| || | ||| |||| | || || ||||| Sbjct 1586309 TCCTTATCCTGAATTTTGGCCTTCACATTATCAATGGTATCTGAGCTCTCCACCTCCAAG 1586368 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || | || || |||||||| || Sbjct 1586369 GTTATGGTCTTACCAGTCAAGGTCTTGACAAAAATCTG 1586406 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| |||||||| ||||| |||||||| |||| ||||| || || | ||||||||||| Sbjct 1586425 CAGCACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTTCCATC 1586484 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||| || || || || ||||| | | |||||| || || ||| ||||| || Sbjct 1586485 TTCCAATTGTTTGCCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTATC 1586544 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || || | |||||||| | || || ||||| || || || Sbjct 1586545 CTGGATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTTATGGT 1586604 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || | ||| || ||||| || || Sbjct 1586605 CTTACCGGTCAAAGTCTTGACAAATATCTG 1586634 Score = 98.7 bits (108), Expect = 2e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||||||||||| ||||||||| | || |||||||| | ||| Sbjct 1587261 CTCATCTTCGCCGGAAAGCAGTTGGAAGACGGAAGGACTCTTGCTGATTACAATATTCAG 1587202 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 || ||||| || ||||| |||||| Sbjct 1587201 AAGGAGTCCACGCTTCATCTTGTT 1587178 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| |||||||||||| | || || || | ||||||||||||||||| ||||||| Sbjct 1587030 ATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGTACTTTGGCCGATTACAATATCCAGAAG 1586971 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| || || |||||||| ||| | ||||| Sbjct 1586970 GAGTCAACCCTCCACCTTGTGTTGCGTCTTCG 1586939 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || || || ||||||||||||||||| | || |||||||| ||||||| Sbjct 1586508 ATCTTTGCAGGCAAACAATTGGAAGATGGAAGGACCCTTGCGGATTACAATATCCAGAAG 1586449 Query 200998 GAGTCTACTCTTCACCTTGT 201017 ||||| |||||||||||||| Sbjct 1586448 GAGTCCACTCTTCACCTTGT 1586429 >seq3 Length=31061273 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| || || || |||| ||||||||| || | ||| | |||||| Sbjct 8017654 AGAACAAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCT 8017595 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||||||||||||||||||||| |||||||| || ||||||||| || Sbjct 8017594 TCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCT 8017535 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || ||| |||| ||||||| | || || || | || |||||| Sbjct 8017534 TGGATCTTGGCTTTGACGTTGTCGATTGTGTCTGAAGACTCAACCTCGAGGGTTATCGTC 8017475 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || |||||||| || || || Sbjct 8017474 TTCCCTGTTAGGGTTTTCACGAAGATCTG 8017446 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||||||| ||||| ||||| || |||| ||| |||||||| | ||| Sbjct 12367080 CGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCAAGAGTT 12367021 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||||||||| || || ||||| | ||||||||| ||| || || Sbjct 12367020 CTGCCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGAGGGATACCC 12366961 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| |||||| || | ||||||| | ||||| ||||| Sbjct 12366960 TCTTTGTCTTGTATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCTACCTCCAAA 12366901 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || || ||||| ||||| Sbjct 12366900 GTAATGGTCTTGCCTGTCAATGTCTTTACAAAGATTTG 12366863 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || ||||| |||||||| || | |||||||||||| | |||| Sbjct 12367536 CGAAGGCGCAAAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTC 12367477 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| ||||| || || ||||| | | |||||| || || ||||| Sbjct 12367476 CTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCC 12367417 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || ||| ||||||| || | ||||||| ||||||| ||||| Sbjct 12367416 TCCTTATCCTGTATTTTTGCCTTCACGTTATCAATTGTGTCTGAACTTTCTACCTCCAAG 12367357 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || |||||||| ||||| Sbjct 12367356 GTAATGGTCTTTCCGGTCAGCGTCTTCACAAAGATTTG 12367319 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || ||||| || || | ||| || ||||||||||||| |||||| Sbjct 12367299 AGGACAAGGTGAAGCGTGGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCATCT 12367240 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || | | |||||||| || ||| |||||| ||| Sbjct 12367239 TCAAGCTGCTTTCCAGCAAATATCAACCTTTGCTGGTCTGGGGGAATACCTTCTTTGTCC 12367180 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||||| | ||||| ||||| || || ||| Sbjct 12367179 TGTATCTTGGTCTTCACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTC 12367120 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| ||||| || Sbjct 12367119 TTTCCGGTAAGAGTCTTCACGAAAATCTG 12367091 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| |||||| || ||||| || | |||||| Sbjct 12366843 AGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCATCT 12366784 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||| || || | | |||||||| ||| ||| || || || Sbjct 12366783 TCCAGCTGCTTTCCGGCAAAAATCAACCTTTGCTGGTCTGGAGGAATACCCTCCTTGTCT 12366724 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||||| ||||||| ||||| || || ||| Sbjct 12366723 TGTATCTTGGCCTTCACATTGTCAATTGTGTCTGAGCTTTCTACCTCCAAAGTAATGGTC 12366664 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| || Sbjct 12366663 TTGCCTGTAAGCGTCTTAACAAAAATCTG 12366635 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || |||||| || || || || ||||| |||| |||||| || ||||| || Sbjct 12366624 CGAAGTCGCAAGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTT 12366565 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||||||||||| || || || || | |||||||| || ||| || Sbjct 12366564 CGGCCATCTTCCAGCTGCTTTCCAGCAAAAATCAGCCTTTGCTGGTCTGGGGGAATACCC 12366505 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| || || | || |||| | || || ||||| Sbjct 12366504 TCCTTGTCTTGAATCTTGGCCTTAACATTGTCAATAGTATCTGAGCTCTCAACCTCCAAA 12366445 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || || |||||||| || Sbjct 12366444 GTAATCGTTTTGCCTGTAAGCGTCTTAACAAAAATCTG 12366407 Score = 107 bits (118), Expect = 5e-18 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || ||||||||||||||||||||||||||||| | ||| | ||||| |||||| ||||| Sbjct 8017569 CTCATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACTCTCGCCGACTACAACATCCAG 8017628 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 ||||| || ||||||||||||||| Sbjct 8017629 AAAGAATCAACTCTTCACCTTGTT 8017652 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||| || ||||||||||||| |||||| ||||| | || Sbjct 12366168 CGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTA 12366109 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||||||||||||| || || || |||||||||||||| | || ||| Sbjct 12366108 CGCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGATGGGATCCCT 12366049 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| || || | ||| |||| | || || || | Sbjct 12366048 TCCTTATCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGA 12365989 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || | ||||| || || || | || ||||| ||||| Sbjct 12365988 GTAACGGTCTTGCCTGTAAGCGCCTTAACAAAGATTTG 12365951 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || ||||| ||||| |||||||||||| | || || |||||| | ||||| Sbjct 12367445 ATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACTCTTGCTGACTACAACATTCAGAAG 12367504 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||||||||||||| ||||||||| | ||||| Sbjct 12367505 GAGTCTACTCTTCATCTTGTTTTGCGCCTTCG 12367536 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || || || ||||||||| |||||||||| | || ||||||||||||||| ||||| Sbjct 12366530 CTGATTTTTGCTGGAAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTACAACATCCAG 12366589 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || || || ||||| ||||| ||| ||||||| Sbjct 12366590 AAGGAATCCACCCTTCATCTTGTCTTGCGACTTCG 12366624 Score = 91.5 bits (100), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || || || ||||||||| | |||||||| || ||| | || || || ||| ||||| Sbjct 12366986 CTCATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACTCTTGCTGACTATAACATCCAG 12367045 Query 200995 AAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||||||| |||||||||||||| ||| | ||||| Sbjct 12367046 AAAGAGTCAACTCTTCACCTTGTCTTGCGTCTTCG 12367080 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || |||||||||||| |||||||||| | || ||||||||||||||| ||||||| Sbjct 12366761 ATTTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTACAACATCCAGAAG 12366820 Query 200998 GAGTCTACTCTTCACCTTGT 201017 || || || ||||| ||||| Sbjct 12366821 GAATCCACCCTTCATCTTGT 12366840 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || ||||||||| | |||||||| |||||||||| ||||| ||| | |||||| Sbjct 12367217 ATATTTGCTGGAAAGCAGCTTGAAGATGGCCGGACTTTGGCTGATTATAACATTCAGAAA 12367276 Query 200998 GAGTCTACTCTTCACCTTGT 201017 ||||| || ||||||||||| Sbjct 12367277 GAGTCCACGCTTCACCTTGT 12367296 >seq9364 Length=1264 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || |||||| || ||||| || || || |||| |||||| ||||| || ||| Sbjct 290 CGAAGTCGCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTC 349 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||||||||| || || || | | |||||||| || ||||| Sbjct 350 CTGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCC 409 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| ||| || || | |||||| | | || || || | Sbjct 410 TCTTTGTCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCGAGG 469 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| |||||||| ||||| Sbjct 470 GTGATGGTCTTTCCAGTGAGAGTCTTCACAAAGATTTG 507 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| |||||| || |||||||| | |||||| Sbjct 71 AGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGCCCATCT 130 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| | | |||||||| || || || || ||| Sbjct 131 TCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCC 190 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| || | ||||||| | || || ||||| || || ||| Sbjct 191 TGAATCTTAGCTTTCACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATAGTC 250 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||||||||| || Sbjct 251 TTGCCAGTAAGGGTCTTCACAAAAATCTG 279 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || ||||||||||||| |||||| || || | |||| || || |||||||| Sbjct 536 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCGGCAAGGGTCCGCCCGTCCTCCAGCTGT 595 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || | ||||||||||||||| || ||||| || ||||| || Sbjct 596 TTTCCAGCAAAAATCAAACGCTGCTGGTCCGGTGGGATCCCTTCCTTATCTTGAATTTTG 655 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||| || | | || || || | || || |||||||| ||| Sbjct 656 GCCTTAACATTGTCTATGGTATCGGAACTCTCAACTTCAAGAGTAATGGTCTTACCAGTG 715 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| Sbjct 716 AGGGTCTTGACAAAGATTTG 735 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || ||||||||| | |||||||| | |||||||||||||||||| ||||||| Sbjct 153 ATCTTTGCTGGAAAGCAGCTCGAAGATGGGCGAACTTTGGCCGATTACAACATCCAGAAG 94 Query 200998 GAGTCTACTCTTCACCTTGT 201017 || || || ||||| ||||| Sbjct 93 GAATCCACCCTTCATCTTGT 74 >seq4 Length=28907061 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| |||||| || ||||| || | |||||| Sbjct 27565894 AGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCATCT 27565835 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || | | ||||| ||||| ||| || || ||| Sbjct 27565834 TCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCC 27565775 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||||| | || || ||||| || || ||| Sbjct 27565774 TGTATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATTGTC 27565715 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||||||||||||||| || Sbjct 27565714 TTACCAGTAAGAGTTTTCACAAAAATCTG 27565686 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || ||||||||| ||||| || || || |||| |||||| ||||| || ||| Sbjct 27565447 CGAAGTCGCAAGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTC 27565388 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||||||||| || || || | | |||||||| || ||||| Sbjct 27565387 CGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCC 27565328 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| ||| || || | ||| || | | || || || | Sbjct 27565327 TCTTTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGG 27565268 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || ||||| ||||| Sbjct 27565267 GTGATTGTCTTTCCGGTGAGGGTCTTAACAAATATTTG 27565230 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||||||| ||||| ||||| || |||| ||| || ||||||| || Sbjct 27565675 CGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCAGCCAGGGTT 27565616 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| |||||||||||||| || || | | |||||| || || ||| ||| Sbjct 27565615 CTGCCATCTTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCT 27565556 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || || | |||||| | | || || || | Sbjct 27565555 TCTTTATCTTGTATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGG 27565496 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || ||||| || || Sbjct 27565495 GTGATGGTCTTTCCAGTGAGGGTCTTAACAAAGATCTG 27565458 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| ||||| |||||||| || | |||||||||||| | ||| Sbjct 27566131 CGAAGGCGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTC 27566072 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| ||||| || || ||||| | | |||||| || || ||||| Sbjct 27566071 CTTCCATCCTCCAATTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCC 27566012 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || || ||| ||| || |||| || |||| ||||||| ||||| Sbjct 27566011 TCCTTGTCTTGTATTTTTGCCTTGACATTATCGATCGTATCTGAACTTTCTACCTCCAAT 27565952 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | ||| |||||||| || || Sbjct 27565951 GTAATGGTCTTTCCAGTCAAAGTCTTCACAAAGATCTG 27565914 Score = 118 bits (130), Expect = 2e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || ||||||||||||| |||||| || || | || | || || ||||||||| Sbjct 27565201 TGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGCCCGTCCTCCAGCTGC 27565142 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||||||||||||||| || ||||| || |||||||| Sbjct 27565141 TTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTATCTTGAATCTTG 27565082 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||| |||| | || || |||| ||||| ||||| || ||| Sbjct 27565081 GCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCCAGAGTGATGGTCTTGCCAGTG 27565022 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| Sbjct 27565021 AGGGTCTTAACGAAGATTTG 27565002 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || ||||||||| | |||||||| |||| || || ||||||||| |||||||| Sbjct 27565356 ATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGGACCTTAGCTGATTACAACATCCAGAAA 27565415 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || |||||||||||||| ||| ||||||| Sbjct 27565416 GAATCCACTCTTCACCTTGTCTTGCGACTTCG 27565447 Score = 98.7 bits (108), Expect = 2e-15 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || |||||||||||| | |||||||| || || |||| ||||| ||| |||||||| Sbjct 27565584 ATTTTTGCCGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCTGATTATAACATCCAGAAA 27565643 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| |||||||||||||| ||| | ||||| Sbjct 27565644 GAGTCAACTCTTCACCTTGTCTTGCGTCTTCG 27565675 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || ||||| ||||| ||||||||||| | || || |||||| | ||||| Sbjct 27566040 ATCTTTGCTGGCAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAG 27566099 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||||||||||||||||||| ||| | ||||| Sbjct 27566100 GAGTCTACTCTTCACCTTGTGTTGCGCCTTCG 27566131 >seq28803 Length=52646 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| || |||||| || ||||| || || || |||| |||||| ||||| || ||| Sbjct 33547 CGAAGTCGCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTC 33606 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||||||||| || || || | | |||||||| || ||||| Sbjct 33607 CTGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCC 33666 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || |||||||| ||| || || | |||||| | | || || || | Sbjct 33667 TCTTTGTCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGG 33726 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || ||||| || || Sbjct 33727 GTGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATCTG 33764 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| ||||| |||||||| || | |||||||||||| | ||| Sbjct 38752 CGAAGGCGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTC 38811 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| ||||| || || ||||| | | |||||| || || |||||| Sbjct 38812 CTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCT 38871 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || ||| ||| || |||| || || | ||||||| ||||| Sbjct 38872 TCCTTGTCCTGTATTTTTGCCTTGACATTATCGATTGTATCAGAACTTTCTACCTCCAAT 38931 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || |||||||| || || Sbjct 38932 GTAATGGTCTTCCCTGTCAACGTCTTCACAAAGATCTG 38969 Score = 120 bits (132), Expect = 7e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| |||||| ||||| || || | |||||| Sbjct 13172 AGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCTAAGGTTCGGCCATCT 13113 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC-TTCTCGCTC 199536 | ||||||||||| || || || | | ||||| |||| ||| || |||| | || Sbjct 13112 ACGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGAGGGAATGCCCTTCTTG-TC 13054 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | ||||||| | || || ||||| || ||||| Sbjct 13053 CTGTATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATCGT 12994 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || |||||||| || ||||| || Sbjct 12993 CTTACCAGTAAGAGTTTTGACGAAAATCTG 12964 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| |||||| || |||||||| | |||||| Sbjct 33328 AGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGCCCATCT 33387 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| | | |||||||| || || || || || Sbjct 33388 TCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCT 33447 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | ||||||| | || || ||||| || || ||| Sbjct 33448 TGAATCTTAGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTTATTGTC 33507 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||||||||| || Sbjct 33508 TTGCCAGTAAGAGTCTTCACAAAAATCTG 33536 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || || ||||| |||| ||| || |||||||| || || |||||| Sbjct 33100 AGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAAGGTTCTGCCATCT 33159 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || || || | | |||||||| ||| ||| || || ||| Sbjct 33160 TCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 33219 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || || | |||||||| | || || ||||| || || ||| Sbjct 33220 TGAATCTTAGCTTTTACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTC 33279 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || |||||||| || || Sbjct 33280 TTCCCTGTCAATGTCTTCACAAAGATCTG 33308 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || ||||| || ||||| || ||||| || | |||||||||||| | ||| Sbjct 32539 CGAAGGCGCAACACAAGATGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTC 32598 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| ||||| || || ||||| | | |||||| || || |||||| Sbjct 32599 CTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCT 32658 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || ||| ||| || |||| || || | ||||||| ||||| Sbjct 32659 TCCTTGTCCTGTATTTTTGCCTTGACATTATCGATTGTATCAGAACTTTCTACCTCCAAA 32718 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || | || |||||||| || || Sbjct 32719 GTAATGGTCTTCCCTGTCAAGGTCTTCACAAAGATCTG 32756 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || || || ||||||||||| | |||||| || || | || | || || ||||||||| Sbjct 33793 TGAAGGGTTGACTCCTTTTGTATGTTGTAATCGGCAAGGGTACGCCCGTCCTCCAGCTGC 33852 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||||||||||||||| || ||||| || |||||||| Sbjct 33853 TTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTATCTTGAATCTTG 33912 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||| |||| | || || || | ||||| ||||| || ||| Sbjct 33913 GCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTGATGGTCTTGCCAGTG 33972 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| Sbjct 33973 AGGGTCTTAACGAAGATTTG 33992 Score = 98.7 bits (108), Expect = 2e-15 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 199450 GTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTG 199509 |||||||||||| | ||||||||||| |||| ||||| || || ||||| | | ||| Sbjct 8842 GTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTG 8783 Query 199510 CTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 ||| || || |||||||| ||||| || ||| ||| || |||| || || Sbjct 8782 CTGATCTGGTGGGATTCCTTCCTTGTCCTGTATTTTTGCCTTAACATTATCGATTGTATC 8723 Query 199570 TGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||||| ||||| || || ||||| || || | ||| |||||||| || || Sbjct 8722 TGAACTTTCTACCTCCAAAGTAATGGTCTTCCCTGTCAAAGTCTTCACAAAGATCTG 8666 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || ||||| ||||| ||||||||||| | || || |||||| | ||||| Sbjct 38843 ATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAG 38784 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||||||||||||||||||| ||| | ||||| Sbjct 38783 GAGTCTACTCTTCACCTTGTGTTGCGCCTTCG 38752 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| ||||| ||||||| || | |||||||||||| | ||| Sbjct 13402 CGAAGGCGCAAGACAAGGTAAAGAGTATACTCCTTCTGAATGTTGTAGTCAGCAAGGGTC 13343 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| |||| ||||| || || ||||| | | |||||| || || ||||| Sbjct 13342 CTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCC 13283 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || ||||| || ||| |||||| Sbjct 13282 TCCTTGTCCTGTATTTTTGCCTTCAC 13257 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || ||||| ||||| ||||||||||| | || || |||||| | ||||| Sbjct 13311 ATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAG 13370 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 |||| ||||||| ||||||| ||| | ||||| Sbjct 13371 GAGTATACTCTTTACCTTGTCTTGCGCCTTCG 13402 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || || ||||| ||||| ||||||||||| | || || |||||| | ||||| Sbjct 32630 ATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAG 32571 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || ||||||||||| ||||| ||| | ||||| Sbjct 32570 GAATCTACTCTTCATCTTGTGTTGCGCCTTCG 32539 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || ||||||||| | |||||||| | |||||||||||||||||| ||||||| Sbjct 33410 ATCTTTGCTGGAAAGCAGCTCGAAGATGGGCGAACTTTGGCCGATTACAACATCCAGAAG 33351 Query 200998 GAGTCTACTCTTCACCTTGT 201017 || || || ||||| ||||| Sbjct 33350 GAATCCACCCTTCATCTTGT 33331 >seq28674 Length=75340 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || |||||||| || || || || || || | || || ||||| | |||| Sbjct 21264 CGGAGCCTGAGAACAAGGTGAAGCGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTC 21205 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||||||| ||||| || || || ||||| | |||||||| || || ||| || Sbjct 21204 CTTCCATCTTCAAGCTGTTTACCAGCAAAGATCAATCGCTGCTGATCAGGTGGAATCCCC 21145 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| || | || || | | || || ||||| Sbjct 21144 TCCTTATCCTGAATCTTCGCCTTCACATTATCAATAGTATCAGAACTCTCCACCTCCAAA 21085 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| ||||| | || ||||||||||| || Sbjct 21084 GTAATCGTCTTTCCCGTCAACGTCTTCACAAAAATCTG 21047 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||| || || ||||||||||||||||||||||| ||||| || ||||||||| Sbjct 20749 CCGTCTTCGAGTTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCC 20690 Query 199532 CGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || || || ||| || || ||| |||| |||||| | | ||| || || | || Sbjct 20689 TTATCTTGGAT-TTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGT 20631 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || |||||||| || || || Sbjct 20630 TATGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTG 20595 >seq6 Length=22682783 Score = 113 bits (124), Expect = 1e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| || || ||||| || ||||| || ||||| |||| ||||| ||||||||||| Sbjct 2585954 CGAAGCCTGAGAACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCAGCCAAAGTG 2585895 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| || |||||||||||||| || | |||||||| ||||| ||||||| Sbjct 2585894 CGTCCATCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGCTGATCCGGGGGAATTCCT 2585835 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || |||||||||||||| | ||||||||| | |||||||| |||||||| ||||||| Sbjct 2585863 ATTTTCGCCGGAAAGCAACTTGAAGATGGACGCACTTTGGCTGATTACAATATCCAGAAG 2585922 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 || || |||||||| |||||| | || ||||| Sbjct 2585923 GAATCAACTCTTCATCTTGTTCTCAGGCTTCG 2585954 >seq5139 Length=1344 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || ||||||||||||| |||||| || || | || | ||||| ||||||||| Sbjct 1299 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGCCCATCCTCCAGCTGC 1240 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||||||||||||||| | ||||| || |||||||| Sbjct 1239 TTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGGTTCCCTTCCTTATCTTGAATCTTG 1180 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || || | ||| |||| | || || || | | ||| ||||| || ||| Sbjct 1179 GCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGCGATGGTCTTGCCAGTG 1120 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| Sbjct 1119 AGGGTCTTAACGAAGATTTG 1100 >seq28626 Length=87040 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || || |||||||| || || || || || || | || || ||||| | ||| Sbjct 42143 CGGAGCCTGAGAACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTT 42202 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| || ||||| || ||||| ||||| | ||||| || || || ||| || Sbjct 42203 CATCCATCCTCAAGCTGTTTACCGGCAAAGATCAATCGCTGTTGATCAGGTGGAATCCCC 42262 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| || | || || | | || || || | Sbjct 42263 TCCTTATCCTGAATCTTGGCCTTCACATTATCAATAGTATCAGAACTCTCCACCTCAAGA 42322 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| ||||| | || ||||||||||| || Sbjct 42323 GTAATCGTCTTCCCCGTCAACGTCTTCACAAAAATCTG 42360 >seq2 Length=32560536 Score = 87.8 bits (96), Expect = 4e-12 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||| |||||||| | ||| | |||||||||| ||| |||||||||||| Sbjct 5974436 CCTTTCTGGATGTTATAGTCAGCAAGAGTGCGACCATCTTCCAACTGTTTTCCGGCGAAG 5974495 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || | | ||||||||||||| ||||||| Sbjct 5974496 ATCAACCTCTGCTGGTCCGGAGGAATTCCT 5974525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178331737261417