Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 seq28626 104 2e-17 seq28674 98.7 1e-15 seq28803 96.9 3e-15 seq4 93.3 4e-14 seq3 93.3 4e-14 seq9364 87.8 2e-12 seq5139 84.2 2e-11 >seq1 Length=28142018 Score = 116 bits (128), Expect = 4e-21 Identities = 147/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACG--AGTCCTCGAGCTGCTTG 133520 ||| ||||| ||||| |||||||||||| ||| || ||| |||||| |||||||| Sbjct 1586962 GGTTGACTCCTTCTGGATATTGTAATCGGCCAAAGT--ACGGCCGTCCTCAAGCTGCTTT 1587019 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || | || ||||||||| || ||||| ||||||||||| |||||| | Sbjct 1587020 CCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCC 1587079 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||| | | || || || | ||||| ||| || || || ||| Sbjct 1587080 TTGACGTTGTCGATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCTGTGAGA 1587139 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 1587140 GTCTTGACGAAGATCTGCAT 1587159 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| ||||||||||| | | || ||| || | |||||| || Sbjct 1587191 GTGGACTCCTTCTGAATATTGTAATCAGCAAGAGTCCTTCCGTCTTCCAACTGCTTTCCG 1587250 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| || |||||||| ||||| || ||||||||||| |||||| ||| Sbjct 1587251 GCGAAGATGAGACGTTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCTTTG 1587310 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | |||||| || | ||||| ||| || ||||| || ||| Sbjct 1587311 ACGTTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGTGTT 1587370 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 1587371 TTCACGAAGATTTGCAT 1587387 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| ||||||||||| | | || || || | || ||||| Sbjct 1586441 GTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTTCCATCTTCCAATTGTTTGCCT 1586500 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | || |||||| || || || || |||||||| || |||||| |||| Sbjct 1586501 GCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTATCCTGGATCTTAGCCTTG 1586560 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | |||||| || | ||| | ||| || ||||||| ||| Sbjct 1586561 ACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTTATGGTCTTACCGGTCAAAGTC 1586620 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 1586621 TTGACAAATATCTGCAT 1586637 >seq28626 Length=87040 Score = 104 bits (114), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||||| || ||||||||||| ||||| ||||| | | || | || || | Sbjct 42386 AAATGTAGCGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTCCTCCCATCTTCCAAT 42445 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | |||||||| || ||||| || ||||||||||| ||| Sbjct 42446 TGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGAT- 42504 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || |||| | || | || |||| || || || || | ||| | ||||||||| Sbjct 42505 TTTGGCTTTGACGTTGTCGATGGTATCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCC 42564 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||| || ||||| ||||| |||||||||| Sbjct 42565 GGTTAGGGTTTTCACGAAGATCTGCATGG 42593 >seq28674 Length=75340 Score = 98.7 bits (108), Expect = 1e-15 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| ||||| || || || ||| | ||||| ||||| ||||| || || || |||||||| Sbjct 20747 GTCTTCGAGTTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTT 20688 Query 133565 GTCGGTGATCTTTTGCTT-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623 || ||| ||| |||| || | || | ||||||| || || || || | ||| | Sbjct 20687 ATCTTGGAT-TTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTTA 20629 Query 133624 CGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||||||||||| || ||||| ||||| ||||||||| Sbjct 20628 TGGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCATG 20591 >seq28803 Length=52646 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| || ||||| ||||||||| | | || | |||||| ||| Sbjct 33790 AAATGAAGGGTTGACTCCTTTTGTATGTTGTAATCGGCAAGGGTACGCCCGTCCTCCAGC 33849 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| || ||||||||||| || ||||| |||||||| || ||| Sbjct 33850 TGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTATCTTGAATC 33909 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || || | ||| || || | |||| ||| ||||| Sbjct 33910 TTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTGATGGTCTTGCCA 33969 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| || ||||| Sbjct 33970 GTGAGGGTCTTAACGAAGATTTGCAT 33995 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| || ||||| || ||||||||| ||| || | || |||||||| Sbjct 33336 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGCCCATCTTCGAGCTG 33395 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | || |||||||| || ||||| || |||||||| ||||| Sbjct 33396 CTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCTTGAATCTT 33455 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | |||| ||||| | | ||| || || | || | || ||||| || Sbjct 33456 AGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTTATTGTCTTGCCAGT 33515 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||||||||| Sbjct 33516 AAGAGTCTTCACAAAAATCTGCAT 33539 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 ||||| |||||||| || |||||||| | | || || | | || ||||||||||| Sbjct 33571 GTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCTG--CCA-TCTTCGAGCTGCTTT 33627 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || |||| | || |||||||| || ||||| || || ||||| ||||| | Sbjct 33628 CCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTCTTGAATCTTGGCC 33687 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||| | |||||| || | ||||| ||| || ||||| || Sbjct 33688 TTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGG 33747 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || || |||||||| Sbjct 33748 GTCTTAACAAAGATCTGCAT 33767 >seq4 Length=28907061 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||| || || || ||||||||| | | || | |||||| ||| Sbjct 27565204 AAATGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGCCCGTCCTCCAGC 27565145 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| || ||||||||||| || ||||| |||||||| || ||| Sbjct 27565144 TGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTATCTTGAATC 27565085 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || || | ||| || || | |||| ||| ||||| Sbjct 27565084 TTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCCAGAGTGATGGTCTTGCCA 27565025 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| || ||||| Sbjct 27565024 GTGAGGGTCTTAACGAAGATTTGCAT 27564999 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||||||| ||| || | | | || ||||||| Sbjct 27565886 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCA-TCTTCGAGCT 27565828 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| | || ||||| || || || ||||| |||||||| |||| Sbjct 27565827 GCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGTATCT 27565768 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| ||||| | | ||| || || | || | || || || | Sbjct 27565767 TAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATTGTCTTACCAG 27565708 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | |||||||| || ||||||||||| Sbjct 27565707 TAAGAGTTTTCACAAAAATCTGCAT 27565683 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || |||||||| | | || | | | || ||||||||||| || Sbjct 27565423 GTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCGGCCA-TCTTCGAGCTGCTTTCC 27565365 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | || |||||||| || ||||| || || ||||| ||||| ||| Sbjct 27565364 AGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTCTTGAATCTTGGCCTT 27565305 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | | |||||| || | ||||| || || ||||| || || Sbjct 27565304 GACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCGGTGAGGGT 27565245 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 27565244 CTTAACAAATATTTGCAT 27565227 >seq3 Length=31061273 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| | | ||| | | | || || | |||||| || Sbjct 8017639 GTTGATTCTTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCA-TCTTCCAACTGCTTTCC 8017581 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || |||||||| || || || ||||||||||| |||||| || Sbjct 8017580 GGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCTTT 8017521 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || |||| ||| | || || || || || || Sbjct 8017520 GACGTTGTCGATTGTGTCTGAAGACTCAACCTCGAGGGTTATCGTCTTCCCTGTTAGGGT 8017461 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 8017460 TTTCACGAAGATCTGCAT 8017443 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAG 133513 ||| | |||||| || ||||| || |||||||| | | || || | | ||||| || Sbjct 12366379 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCTAATGTCCTG--CCA-TCCTCAAG 12366323 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || |||| |||| |||||||| || || || ||||||||||| || Sbjct 12366322 CTGTTTTCCAGCAAAAATCAGCCTTTGCTGGTCTGGTGGAATACCTTCCTTGTCTTGAAT 12366263 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||| || | ||| || || | ||||||||| || || Sbjct 12366262 CTTGACCTTGACATTTTCTATCGTATCCGAACTCTCAACCTCAAGGGTGACGGTCTTTCC 12366203 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || || ||||| Sbjct 12366202 GGTGAGAGTCTTCACAAAGATTTGCAT 12366176 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| || || ||||| ||| || | | | || || |||||||| || Sbjct 12367284 GTGGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCA-TCTTCAAGCTGCTTTCC 12367226 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | || |||||||| || || || ||||| ||||| ||||| ||| Sbjct 12367225 AGCAAATATCAACCTTTGCTGGTCTGGGGGAATACCTTCTTTGTCCTGTATCTTGGTCTT 12367166 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | ||| || || | ||| | || || ||||| ||||| Sbjct 12367165 CACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTTCCGGTAAGAGT 12367106 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 12367105 CTTCACGAAAATCTGCAT 12367088 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||||||| ||| || | | | || || |||| Sbjct 12366607 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCA-TCTTCCAGCT 12366549 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| |||| |||||||| || || || || |||||||| |||| Sbjct 12366548 GCTTTCCAGCAAAAATCAGCCTTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCT 12366489 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| || || | | ||| || || | || | |||||||| | Sbjct 12366488 TGGCCTTAACATTGTCAATAGTATCTGAGCTCTCAACCTCCAAAGTAATCGTTTTGCCTG 12366429 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || ||||||||||| Sbjct 12366428 TAAGCGTCTTAACAAAAATCTGCAT 12366404 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||||||| ||| || | | | || || |||| Sbjct 12366835 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCA-TCTTCCAGCT 12366777 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| | || |||||||| ||||| || || |||||||| |||| Sbjct 12366776 GCTTTCCGGCAAAAATCAACCTTTGCTGGTCTGGAGGAATACCCTCCTTGTCTTGTATCT 12366717 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| ||||| | | || || || | || | ||| ||||| | Sbjct 12366716 TGGCCTTCACATTGTCAATTGTGTCTGAGCTTTCTACCTCCAAAGTAATGGTCTTGCCTG 12366657 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || ||||||||||| Sbjct 12366656 TAAGCGTCTTAACAAAAATCTGCAT 12366632 >seq9364 Length=1264 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 ||||| |||||||| || |||||||| | | || || | | || ||||||||||| Sbjct 314 GTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCTG--CCA-TCTTCGAGCTGCTTT 370 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || |||| | || |||||||| || ||||| || || ||||| ||||| | Sbjct 371 CCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTCTTGAATCTTGGCC 430 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||| | |||||| |||| ||||| ||| || || || ||| Sbjct 431 TTGACATTGTCTATGGTGTCAGAACTCTCCACCTCGAGGGTGATGGTCTTTCCAGTGAGA 490 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || || || ||||| Sbjct 491 GTCTTCACAAAGATTTGCAT 510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| || ||||| || ||||||||| ||| || | || |||||||| Sbjct 79 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAAGTTCGCCCATCTTCGAGCTG 138 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | || |||||||| || ||||| || |||||||| ||||| Sbjct 139 CTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGAATCTT 198 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | | |||| ||||| | | ||| || || | || | || ||||| || Sbjct 199 AGCTTTCACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATAGTCTTGCCAGT 258 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||||||||| Sbjct 259 AAGGGTCTTCACAAAAATCTGCAT 282 >seq5139 Length=1344 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||||||| || || || ||||||||| | | || | ||||| ||| Sbjct 1302 AAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCGGCAAGGGTACGCCCATCCTCCAGC 1243 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| || ||||||||||| || ||| | |||||||| || ||| Sbjct 1242 TGCTTTCCAGCAAAAATCAGACGCTGCTGGTCCGGTGGGTTCCCTTCCTTATCTTGAATC 1183 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || || | ||| || |||| | || ||| ||||| Sbjct 1182 TTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGCGATGGTCTTGCCA 1123 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| || || || Sbjct 1122 GTGAGGGTCTTAACGAAGATTTGTAT 1097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483184824179240