Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq9364 136 4e-27 seq28803 116 4e-21 seq28626 114 1e-20 seq4 114 1e-20 seq1 109 6e-19 seq3 107 2e-18 seq28613 87.8 2e-12 seq28674 86.0 6e-12 >seq9364 Length=1264 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| |||||||| |||||||| ||| ||| ||| | ||| || |||||| Sbjct 536 TGGAGGGTGGACTCCTTTTGGATGTTGTAATCGGCAAGGGTCCGCCCGTCCTCCAGCTGT 595 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || |||||||||||||||||||| || || || || ||||| || ||||||||||| Sbjct 596 TTTCCAGCAAAAATCAAACGCTGCTGGTCCGGTGGGATCCCTTCCTTATCTTGAATTTTG 655 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | || ||||| || || || ||||||||||| ||||| || Sbjct 656 GCCTTAACATTGTCTATGGTATCGGAACTCTCAACTTCAAGAGTAATGGTCTTACCAGTG 715 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 716 AGGGTCTTGACAAAGATTTGCAT 738 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG-TG 134554 |||||||| || || || || |||||||| || || |||||||| || | | ||| || Sbjct 293 AGTCGCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCTG 352 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || |||||||| || || ||||||||||| | ||||| || || || || || || Sbjct 353 CCA-TCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTC 411 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 ||| |||||||| || ||||| ||| | ||||| || ||||| ||||| || Sbjct 412 TTTGTCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCGAGGGT 471 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | ||| || || || |||||||| Sbjct 472 GATGGTCTTTCCAGTGAGAGTCTTCACAAAGATTTGCAT 510 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | || | || || || || ||||||||||| || |||||||| ||| | Sbjct 56 CCTCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 115 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || |||||||| || || ||||| ||||| | ||||| || || || Sbjct 116 AAAGTTCGCCCATCTTCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGG 175 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||| || ||| | ||||| || || || Sbjct 176 ATACCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATAGTGTCTGAGCTCTCAACC 235 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||| || || || || | || || || ||||| ||||| Sbjct 236 TCCAAAGTAATAGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 282 >seq28803 Length=52646 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | |||||||| || || || || |||||||| || || |||||||| || | Sbjct 33541 CCTCCACGAAGTCGCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGCT 33600 Query 134547 ACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| || | || |||||||| || || ||||||||||| | ||||| || || || Sbjct 33601 AAGGTCCTGCCA-TCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGG 33659 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| |||||||| || ||||| ||| | ||||| || ||||| Sbjct 33660 GATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCAC 33719 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | || ||||| || || ||||| Sbjct 33720 CTCAAGGGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAGATCTGCAT 33767 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| || || || || |||||||| |||||||||||||| ||| ||| Sbjct 32542 AGGCGCAACACAAGATGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 32601 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || || || ||||| ||||| | ||||||||| || || || ||||| Sbjct 32602 CCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCC 32661 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || |||||| ||||| || | ||| || || ||| || || | |||| Sbjct 32662 TTGTCCTGTATTTTTGCCTTGACATTATCGATTGTATCAGAACTTTCTACCTCCAAAGTA 32721 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || || || || ||||| Sbjct 32722 ATGGTCTTCCCTGTCAAGGTCTTCACAAAGATCTGCAT 32759 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| ||||| || || || ||||| |||||||||||||| ||| ||| Sbjct 38755 AGGCGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 38814 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || || || ||||| ||||| | ||||||||| || || || ||||| Sbjct 38815 CCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCC 38874 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || |||||| ||||| || | ||| || || ||| || || | ||| Sbjct 38875 TTGTCCTGTATTTTTGCCTTGACATTATCGATTGTATCAGAACTTTCTACCTCCAATGTA 38934 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || || || || ||||| Sbjct 38935 ATGGTCTTCCCTGTCAACGTCTTCACAAAGATCTGCAT 38972 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || || || || ||||||||||| || ||||| || || ||||| | | || | || || Sbjct 33103 ACAAGATGAAGGGTGGATTCCTTCTGGATGTTATAATCAGCCAAGGTTCTGCCA-TCTTC 33161 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| || || ||||||||||| | ||||| || || || ||||| || || || || Sbjct 33162 AAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 33221 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||| || ||| || ||| | ||||| || || || || | ||||||||| || Sbjct 33222 AATCTTAGCTTTTACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTT 33281 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || ||||| Sbjct 33282 CCCTGTCAATGTCTTCACAAAGATCTGCAT 33311 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || || | || || || || ||||||||||| || |||||||| || | Sbjct 13187 CCTCCCCTCAGACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCT 13128 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||||| || || ||||||||||| | |||||||| | || Sbjct 13127 AAGGTTCGGCCATCTACGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGAGGGA 13068 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| | || || || || || || || ||| | ||||| || || || Sbjct 13067 ATGCCCTTCTTGTCCTGTATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACC 13008 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || ||||| || | |||||| |||||||| ||||| Sbjct 13007 TCCAAAGTTATCGTCTTACCAGTAAGAGTTTTGACGAAAATCTGCAT 12961 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | || | || || || || ||||||||||| || |||||||| ||| | Sbjct 33313 CCTCCCCTCAACCGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 33372 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || |||||||| || || ||||| ||||| | ||||| || || || Sbjct 33373 AAAGTTCGCCCATCTTCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGGTCTGGGGGG 33432 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || |||||||| || || || ||| | ||||| || || || Sbjct 33433 ATACCCTCCTTGTCTTGAATCTTAGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACC 33492 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || || || | ||| || || ||||| ||||| Sbjct 33493 TCCAAAGTTATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 33539 >seq28626 Length=87040 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || |||||||| ||||| ||||||||||| || || || ||||| || ||||| ||| Sbjct 42446 TGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGATT 42505 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || |||||| ||| | || ||||| ||||| || || || || |||||||| ||| Sbjct 42506 TTGGCTTTGACGTTGTCGATGGTATCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCG 42565 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| ||||| ||||| || ||||| Sbjct 42566 GTTAGGGTTTTCACGAAGATCTGCAT 42591 >seq4 Length=28907061 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||||||| || ||||| || |||||||| || || |||||||| || | | ||| | Sbjct 27565444 AGTCGCAAGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCGG 27565385 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || ||||||||||| | ||||| || || || || || ||| Sbjct 27565384 CCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCT 27565325 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || ||||| ||| | || || || ||||| || || || Sbjct 27565324 TTGTCTTGAATCTTGGCCTTGACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTG 27565265 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || ||||| || |||||||| Sbjct 27565264 ATTGTCTTTCCGGTGAGGGTCTTAACAAATATTTGCAT 27565227 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || || | || || || || ||||||||||| || |||||||| ||| | Sbjct 27565909 CCTCCCCTCAGACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 27565850 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| || || ||||||||||| | |||||||| || || Sbjct 27565849 AAGGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGA 27565790 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | |||||| || || || Sbjct 27565789 ATGCCCTCCTTGTCCTGTATCTTAGCCTTCACATTGTCAATTGTGTCTGAGCTCTCAACC 27565730 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || ||||| || | |||||| || ||||| ||||| Sbjct 27565729 TCCAAAGTTATTGTCTTACCAGTAAGAGTTTTCACAAAAATCTGCAT 27565683 Score = 109 bits (120), Expect = 6e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || ||||| || ||||| || || || || || || ||||| || || |||| | | || Sbjct 27565672 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTG 27565613 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || |||||||| || || ||||||||||| | ||||||||| || || || ||||| Sbjct 27565612 CCA-TCTTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCTTC 27565554 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 ||| ||||| || || ||||| ||| | ||||| || ||||| || || || Sbjct 27565553 TTTATCTTGTATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGT 27565494 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || ||||| || || ||||| Sbjct 27565493 GATGGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 27565455 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| ||||| || || || ||||| |||||||||||||| ||| ||| Sbjct 27566128 AGGCGCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 27566069 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || ||||| ||||| ||||| | ||||||||| || || || || || Sbjct 27566068 CCATCCTCCAATTGCTTGCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCC 27566009 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| |||||| ||||| || | || || || ||| || || | ||| Sbjct 27566008 TTGTCTTGTATTTTTGCCTTGACATTATCGATCGTATCTGAACTTTCTACCTCCAATGTA 27565949 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || || || || ||||| Sbjct 27565948 ATGGTCTTTCCAGTCAAAGTCTTCACAAAGATCTGCAT 27565911 >seq1 Length=28142018 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| ||| ||||| || ||||| ||||| || || ||||| || ||| ||| Sbjct 1586423 CGCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCAAGGGTCCTTCCA 1586482 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | |||||||||||||| ||||| | ||||||||| || || || ||||| || Sbjct 1586483 TCTTCCAATTGTTTGCCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTA 1586542 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || ||||| ||| | ||||| || ||||| || | || ||| Sbjct 1586543 TCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAGGTTATG 1586602 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| ||||| || || || || ||||| Sbjct 1586603 GTCTTACCGGTCAAAGTCTTGACAAATATCTGCAT 1586637 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || ||||| ||||| |||||||||||||| ||| ||| Sbjct 1586192 AGACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 1586251 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | |||||| ||||| || |||| | ||||||||| || || || ||||| Sbjct 1586252 CCATCCTCCAACTGTTTCCCTGCGAAGATCAGCCTCTGCTGATCAGGTGGGATACCTTCC 1586311 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || |||||||| || || || | || || || ||||| || | || Sbjct 1586312 TTATCCTGAATTTTGGCCTTCACATTATCAATGGTATCTGAGCTCTCCACCTCCAAGGTT 1586371 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || || || || ||||| ||||| Sbjct 1586372 ATGGTCTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1586409 >seq3 Length=31061273 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || ||||| || || |||||||||||| | | ||| | || || Sbjct 8017651 ACAAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCTTCC 8017592 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | ||| || || || || || | ||| ||||| || || || || ||||| || ||||| Sbjct 8017591 AACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGG 8017532 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| ||| | |||||| || || || || ||||| || || || || Sbjct 8017531 ATCTTGGCTTTGACGTTGTCGATTGTGTCTGAAGACTCAACCTCGAGGGTTATCGTCTTC 8017472 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || |||| ||||| ||||| || ||||| || Sbjct 8017471 CCTGTTAGGGTTTTCACGAAGATCTGCATCTT 8017440 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | || | || || || || ||||||||||| || |||||||| ||| | Sbjct 12366858 CCTCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 12366799 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| || || ||||||||||| | ||||| || || || Sbjct 12366798 AAGGTTCGGCCATCTTCCAGCTGCTTTCCGGCAAAAATCAACCTTTGCTGGTCTGGAGGA 12366739 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || || || ||| | |||||| || ||| || Sbjct 12366738 ATACCCTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCTGAGCTTTCTACC 12366679 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || || | || ||||| ||||| ||||| Sbjct 12366678 TCCAAAGTAATGGTCTTGCCTGTAAGCGTCTTAACAAAAATCTGCAT 12366632 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||||||| || || || || ||||||||||| || |||||||| || || || | || Sbjct 12366393 AGTCGCAAGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCTAATGTCCTG 12366334 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || |||||||| || |||||||||| | ||||| || || || || ||||| Sbjct 12366333 CCA-TCCTCAAGCTGTTTTCCAGCAAAAATCAGCCTTTGCTGGTCTGGTGGAATACCTTC 12366275 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || |||||||| || ||||| || | || || || || || || || || Sbjct 12366274 CTTGTCTTGAATCTTGACCTTGACATTTTCTATCGTATCCGAACTCTCAACCTCAAGGGT 12366215 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| | ||| || || || |||||||| Sbjct 12366214 GACGGTCTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 12366176 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||||||| || || || || ||||||||||| || |||||||| ||| | | ||| | Sbjct 12366621 AGTCGCAAGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGG 12366562 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || |||||||||| | ||||| || || || || || || Sbjct 12366561 CCATCTTCCAGCTGCTTTCCAGCAAAAATCAGCCTTTGCTGGTCTGGGGGAATACCCTCC 12366502 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || || || ||| | || || || || || || | |||| Sbjct 12366501 TTGTCTTGAATCTTGGCCTTAACATTGTCAATAGTATCTGAGCTCTCAACCTCCAAAGTA 12366442 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || | || ||||| ||||| ||||| Sbjct 12366441 ATCGTTTTGCCTGTAAGCGTCTTAACAAAAATCTGCAT 12366404 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || || || || || || ||||| |||||||||||||| ||| || Sbjct 12367533 AGGCGCAAAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTT 12367474 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | || || || ||||| ||||| | ||||||||| || || || || || Sbjct 12367473 CCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCC 12367414 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || |||||| || || || | |||||| || ||| || || | ||| Sbjct 12367413 TTATCCTGTATTTTTGCCTTCACGTTATCAATTGTGTCTGAACTTTCTACCTCCAAGGTA 12367354 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| | || || || || |||||||| Sbjct 12367353 ATGGTCTTTCCGGTCAGCGTCTTCACAAAGATTTGCAT 12367316 >seq28613 Length=6376 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| ||||| | | || | ||| ||||| ||||||||||||||||| || || Sbjct 5603 TTCCTCCCCTGAGCCTTAGGACCAAGTGAAGCGTTGATTCCTTTTGAATGTTATAATCAG 5544 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| ||| | || || ||||| || || ||||||||||| | |||||| || || | Sbjct 5543 CAAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAG 5484 Query 134605 GTATGCCTTCTTTTTC 134620 | || ||||| || || Sbjct 5483 GGATACCTTCCTTGTC 5468 >seq28674 Length=75340 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 21252 ACAAGGTGAAGCGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCCATCTTCA 21193 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || ||||| ||||| ||||||||||| || || || || || || || ||| Sbjct 21192 AGCTGTTTACCAGCAAAGATCAATCGCTGCTGATCAGGTGGAATCCCCTCCTTATCCTGA 21133 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | || || || ||||| || | |||||| || || Sbjct 21132 ATCTTCGCCTTCACATTATCAATAGTATCAGAACTCTCCACCTCCAAAGTAATCGTCTTT 21073 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || || || ||||| |||||| Sbjct 21072 CCCGTCAACGTCTTCACAAAAATCTGCATT 21043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505151696088520