Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20pratense_20[genbank_20GCA_5F900079335.1_202016-04-15] 39,051 sequences; 345,990,850 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 196 5e-45 seq4 194 2e-44 seq28803 179 4e-40 seq9364 179 4e-40 seq5139 159 4e-34 seq1 152 6e-32 seq28626 150 2e-31 seq28674 145 9e-30 seq28613 98.7 1e-15 seq2 98.7 1e-15 seq6 93.3 5e-14 >seq3 Length=31061273 Score = 196 bits (216), Expect = 5e-45 Identities = 182/229 (79%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||||||||| ||||| || |||||| | ||||||||| || | Sbjct 12366404 ATGCAGATTTTTGTTAAGACGCTTACAGGCAAAACGATTACTTTGGAGGTTGAG--AGCT 12366461 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| | ||||| || ||||| ||||||||||| ||||| ||||||| Sbjct 12366462 CAGATACTATTGACAATGTTAAGGCCAAGATTCAAGACAAGGAGGGTATTCCCCCAGACC 12366521 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || ||||||||||| ||||| || || |||| || ||| | || || || | Sbjct 12366522 AGCAAAGGCTGATTTTTGCTGGAAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTACA 12366581 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 12366582 ACATCCAGAAGGAATCCACCCTTCATCTTGTCTTGCGACTTCGTGGTGG 12366630 Score = 192 bits (212), Expect = 7e-44 Identities = 181/229 (79%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||| ||||||| |||||||| ||||||| || |||||| || | Sbjct 12365948 ATGCAAATCTTTGTTAAGGCGCTTACAGGCAAGACCGTTACTCTCGAAGTTGAG--AGTT 12366005 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| | ||||| || ||||| || ||||| || || || |||||| Sbjct 12366006 CAGATACCATAGACAATGTTAAGGCCAAGATTCAAGATAAGGAAGGGATCCCATCAGACC 12366065 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| ||||||||||| ||||| || ||||||| |||||||| || || || | Sbjct 12366066 AGCAGCGTCTGATTTTTGCTGGAAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACA 12366125 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||| ||||| || ||| | || | |||||||| ||||| Sbjct 12366126 ACATCCAAAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTTCGTGGTGG 12366174 Score = 187 bits (206), Expect = 3e-42 Identities = 180/229 (79%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| | || |||||||| |||||| | ||||| ||| || | Sbjct 12366860 ATGCAAATCTTTGTAAAGACATTGACAGGCAAGACCATTACTTTGGAGGTAGAG--AGCT 12366917 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| |||||||||| || || ||||| ||||| || |||||||||| Sbjct 12366918 CAGACACAATTGACAATGTGAAGGCTAAGATACAAGACAAAGAGGGTATCCCTCCAGACC 12366977 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || ||||||||||| ||||| || || |||| | || || || ||||||| Sbjct 12366978 AGCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACTCTTGCTGACTATA 12367037 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || || || |||||||| || |||||||||||||| ||||| Sbjct 12367038 ACATCCAGAAAGAGTCAACTCTTCACCTTGTCTTGCGTCTTCGTGGTGG 12367086 Score = 183 bits (202), Expect = 3e-41 Identities = 179/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| || ||||| ||||| | || |||||||||||| || | Sbjct 12366176 ATGCAAATCTTTGTGAAGACTCTCACCGGAAAGACCGTCACCCTTGAGGTTGAG--AGTT 12366233 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| || | |||| | |||| || ||||| |||||||| || ||||| ||||||| Sbjct 12366234 CGGATACGATAGAAAATGTCAAGGTCAAGATTCAAGACAAGGAAGGTATTCCACCAGACC 12366293 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || ||||||||||| || || || ||||||| | || |||| || || | Sbjct 12366294 AGCAAAGGCTGATTTTTGCTGGAAAACAGCTTGAGGATGGCAGGACATTAGCTGATTACA 12366353 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 12366354 ACATCCAGAAGGAATCCACCCTTCATCTTGTCTTGCGACTTCGTGGTGG 12366402 Score = 176 bits (194), Expect = 5e-39 Identities = 178/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| |||||||| ||||| ||||| ||||| | ||||| || || | Sbjct 12367316 ATGCAAATCTTTGTGAAGACGCTGACCGGAAAGACCATTACCTTGGAGGTAGAA--AGTT 12367373 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| || ||||||| ||||| ||||| ||||||||||| || ||||| | Sbjct 12367374 CAGACACAATTGATAACGTGAAGGCAAAAATACAGGATAAGGAGGGAATCCCACCAGATC 12367433 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| |||||| | ||||||| | || || || ||||| | Sbjct 12367434 AGCAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACTCTTGCTGACTACA 12367493 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | | || ||||| || ||||||||||| || ||||| |||||||||||| Sbjct 12367494 ACATTCAGAAGGAGTCTACTCTTCATCTTGTTTTGCGCCTTCGCGGTGGA 12367543 Score = 163 bits (180), Expect = 3e-35 Identities = 168/218 (77%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||||||||| |||||||| |||||| | ||||| || || | Sbjct 12366632 ATGCAGATTTTTGTTAAGACGCTTACAGGCAAGACCATTACTTTGGAGGTAGAA--AGCT 12366689 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| ||||||| || || || ||||||||||| ||||||||||||| Sbjct 12366690 CAGACACAATTGACAATGTGAAGGCCAAGATACAAGACAAGGAGGGTATTCCTCCAGACC 12366749 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | |||||||| || ||||| || || |||| || ||| | || || || | Sbjct 12366750 AGCAAAGGTTGATTTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCTTGGCCGATTACA 12366809 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 | |||| ||||||||||| |||||||| ||| | ||| Sbjct 12366810 ACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGT 12366847 Score = 131 bits (144), Expect = 2e-25 Identities = 162/220 (74%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| |||||||| ||||||||||| | ||||| ||| || | Sbjct 12367088 ATGCAGATTTTCGTGAAGACTCTTACCGGAAAGACTATTACCTTGGAGGTAGAG--AGCT 12367145 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| ||||| | || || |||||||| || || ||||| ||||||| Sbjct 12367146 CAGACACTATTGACAATGTGAAGACCAAGATACAGGACAAAGAAGGTATTCCCCCAGACC 12367205 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | || |||||||| ||||| || || |||| || || | || || |||| Sbjct 12367206 AGCAAAGGTTGATATTTGCTGGAAAGCAGCTTGAAGATGGCCGGACTTTGGCTGATTATA 12367265 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | | || || || ||||| ||||| || ||| | ||||| Sbjct 12367266 ACATTCAGAAAGAGTCCACGCTTCACCTTGTCCTTCGTCT 12367305 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| || || || ||||||||||| Sbjct 8017443 ATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATAACCCTCGAGGTTGAGTCTTCA 8017502 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || || |||||||| |||||||| || |||||| Sbjct 8017503 GACACAATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 8017562 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || || ||||| | || |||| || || || || ||||| || Sbjct 8017563 CAACGTCTCATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACTCTCGCCGACTACAAC 8017622 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| || ||||| |||||||| || || Sbjct 8017623 ATCCAGAAAGAATCAACTCTTCACCTTGT 8017651 >seq4 Length=28907061 Score = 194 bits (214), Expect = 2e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || ||||| ||||| || || |||||||| ||| | Sbjct 27565227 ATGCAAATATTTGTTAAGACCCTCACCGGAAAGACAATCACCCTTGAGGTGGAGAGCTCT 27565286 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||||| || ||||| ||||| |||||||| || ||||||||| Sbjct 27565287 GATACCATTGACAATGTCAAGGCCAAGATTCAAGACAAAGAGGGAATCCCACCAGACCAG 27565346 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||||||||| ||||| ||||| |||| || ||| |||| || || || Sbjct 27565347 CAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGGACCTTAGCTGATTACAAC 27565406 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct 27565407 ATCCAGAAAGAATCCACTCTTCACCTTGTCTTGCGACTTCGTGGTGG 27565453 Score = 170 bits (188), Expect = 2e-37 Identities = 182/237 (77%), Gaps = 5/237 (2%) Strand=Plus/Plus Query 27399 TACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTG 27457 || |||| ||||||||||| || ||||| || || |||||||| || ||||| || |||| Sbjct 27564991 TAATATAGATGCAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTGGAAGTTG 27565050 Query 27458 AGTCAGGT--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515 || || | |||| ||| | ||| | ||||| || ||||| || ||||| || || || Sbjct 27565051 AG--AGTTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGATAAGGAAGGGATCCC 27565108 Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575 || |||||||||||||| ||||||||||| ||||| || ||||| | |||||||| || Sbjct 27565109 ACCGGACCAGCAGCGTCTGATTTTTGCTGGAAAGCAGCTGGAGGACGGGCGTACCCTTGC 27565168 Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || |||||||||| || || || ||| | || | ||||| || ||||| Sbjct 27565169 CGATTACAACATCCAAAAGGAGTCTACCCTCCATTTGGTGCTCCGTCTCCGTGGTGG 27565225 Score = 161 bits (178), Expect = 1e-34 Identities = 169/220 (77%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || ||||| || ||||| || ||| | ||||||||| || | Sbjct 27565683 ATGCAGATTTTTGTGAAAACTCTTACTGGTAAGACAATAACTTTGGAGGTTGAG--AGCT 27565740 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| |||||||||| || |||||||||||||| ||||| || || | Sbjct 27565741 CAGACACAATTGACAATGTGAAGGCTAAGATACAGGACAAGGAGGGCATTCCCCCGGATC 27565800 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | ||||||||||| ||||| ||||| |||| || ||| | || || || | Sbjct 27565801 AGCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACCTTGGCCGATTACA 27565860 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||||||||| |||||||| ||| | ||||| Sbjct 27565861 ACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGTCT 27565900 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || || ||||| || || |||||||| ||| | Sbjct 27565455 ATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 27565514 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || || || || || ||||| ||||| ||| Sbjct 27565515 GACACCATAGACAATGTCAAGGCCAAGATACAAGATAAAGAAGGTATTCCCCCAGATCAG 27565574 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| || ||||| ||||| |||| | ||||| || || ||||| Sbjct 27565575 CAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCTGATTATAAC 27565634 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || |||||||| || |||||||||||||| ||||| Sbjct 27565635 ATCCAGAAAGAGTCAACTCTTCACCTTGTCTTGCGTCTTCGTGGTGG 27565681 Score = 152 bits (168), Expect = 6e-32 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| ||||| | ||||| || || | Sbjct 27565911 ATGCAGATCTTTGTGAAGACTTTGACTGGAAAGACCATTACATTGGAGGTAGAA--AGTT 27565968 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| || | ||| | ||||| ||||| || |||||||||||||| || ||||| | Sbjct 27565969 CAGATACGATCGATAATGTCAAGGCAAAAATACAAGACAAGGAGGGAATCCCACCAGATC 27566028 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| |||||| | ||||||| | ||||| || ||||| | Sbjct 27566029 AGCAGAGGTTGATCTTTGCTGGCAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACA 27566088 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | | || ||||| || |||||||| || || ||||| ||||| |||||| Sbjct 27566089 ACATTCAGAAGGAGTCTACTCTTCACCTTGTGTTGCGCCTTCGTGGTGGA 27566138 Score = 82.4 bits (90), Expect = 9e-11 Identities = 84/110 (76%), Gaps = 10/110 (9%) Strand=Plus/Plus Query 60708 TAATAATAACTGACCTTAGCTCAATTGGTAGAGCGAAAGACTGTAGAGCACGTCTCTGAG 60767 ||| || ||| |||||||||||| ||||||||||| | |||||||| | | | Sbjct 7721181 TAACAACAACCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAG--------TTGGGG 7721232 Query 60768 TAGGATGGTCAATCATCTTTAGGTCGCTGGTTCGATTCCGGCAGGTCAGA 60817 || ||| | || ||| ||||||||||||||||| ||||||||||| || Sbjct 7721233 TACCATGCTGAA--ATCCTTAGGTCGCTGGTTCGAATCCGGCAGGTCGGA 7721280 >seq28803 Length=52646 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||| ||||| || || |||||||| ||| | Sbjct 33767 ATGCAGATCTTTGTTAAGACCCTCACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 33708 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || ||||| ||||| |||||||| || ||||||||| Sbjct 33707 GACACCATAGACAATGTCAAGGCCAAGATTCAAGACAAAGAGGGAATCCCACCAGACCAG 33648 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||||||||| ||||| ||||| |||| | ||| |||| || || || Sbjct 33647 CAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACCTTAGCTGATTACAAC 33588 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||||||||||||||| |||||||| ||||| || || Sbjct 33587 ATCCAGAAAGAATCCACTCTTCATCTTGTCTTGCGACTTCGTGGAGG 33541 Score = 176 bits (194), Expect = 5e-39 Identities = 185/239 (77%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 27397 ATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 |||| |||| ||||||||||| || ||||| || || |||||||| || |||||||| || Sbjct 34004 ATTA-TATAGATGCAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTTGAAGT 33946 Query 27456 TGAGTCAGGT--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATT 27513 |||| || | |||| ||| | ||| | ||||| || ||||| || ||||| || || Sbjct 33945 TGAG--AGTTCAGATACCATAGACAATGTTAAGGCCAAGATTCAAGATAAGGAAGGGATC 33888 Query 27514 CCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTA 27573 || || |||||||||||||| ||||||||||| ||||| || ||||| | |||||||| Sbjct 33887 CCACCGGACCAGCAGCGTCTGATTTTTGCTGGAAAGCAGCTGGAGGACGGGCGTACCCTT 33828 Query 27574 GCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || || | |||||||| || || |||||| | || | ||||| || ||||| Sbjct 33827 GCCGATTACAACATACAAAAGGAGTCAACCCTTCATTTGGTGCTCCGTCTCCGTGGTGG 33769 Score = 172 bits (190), Expect = 6e-38 Identities = 170/218 (78%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| |||||| | ||||||||| || | Sbjct 33311 ATGCAGATCTTTGTGAAGACATTGACAGGGAAGACCATTACTTTGGAGGTTGAG--AGCT 33254 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| | || ||||| ||||||||||||||||| ||||||||||||| Sbjct 33253 CAGACACCATTGACAATGTAAAAGCTAAGATTCAGGACAAGGAGGGCATTCCTCCAGACC 33194 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | ||||||||||| ||||| || || |||| | ||| | || || |||| Sbjct 33193 AGCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACCTTGGCTGATTATA 33134 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 | |||| ||||||||||| |||||||| ||| | ||| Sbjct 33133 ACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGT 33096 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| |||||| | ||||| || | Sbjct 32759 ATGCAGATCTTTGTGAAGACCTTGACAGGGAAGACCATTACTTTGGAGGTAGAAAGTTCT 32700 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct 32699 GATACAATCGATAATGTCAAGGCAAAAATACAGGACAAGGAAGGAATCCCACCAGATCAG 32640 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||| |||||| | ||||||| | ||||| || ||||| || Sbjct 32639 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAAC 32580 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||||||||||| || ||||| ||||| ||||| Sbjct 32579 ATTCAGAAGGAATCTACTCTTCATCTTGTGTTGCGCCTTCGTGGTGG 32533 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||| | || || ||||| ||||| | ||||| || | Sbjct 38972 ATGCAGATCTTTGTGAAGACGTTGACAGGGAAGACCATTACATTGGAGGTAGAAAGTTCT 38913 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct 38912 GATACAATCGATAATGTCAAGGCAAAAATACAGGACAAGGAAGGAATCCCACCAGATCAG 38853 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||| |||||| | ||||||| | ||||| || ||||| || Sbjct 38852 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAAC 38793 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || |||||||| || || ||||| ||||| ||||| Sbjct 38792 ATTCAGAAGGAGTCTACTCTTCACCTTGTGTTGCGCCTTCGTGGTGG 38746 Score = 156 bits (172), Expect = 5e-33 Identities = 163/212 (77%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| |||||||| || ||| | ||||||||| || | Sbjct 33539 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATAACTTTGGAGGTTGAG--AGCT 33482 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| | |||||||| ||||| ||||||||||| || || ||||||| Sbjct 33481 CAGACACTATTGACAATGTTAAGGCTAAGATTCAAGACAAGGAGGGTATCCCCCCAGACC 33422 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | || |||||||| ||||| ||||| |||| || || | || || || | Sbjct 33421 AGCAAAGGTTGATCTTTGCTGGAAAGCAGCTCGAAGATGGGCGAACTTTGGCCGATTACA 33362 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | |||| ||||||||||| |||||||| ||| Sbjct 33361 ACATCCAGAAGGAATCCACCCTTCATCTTGTC 33330 Score = 152 bits (168), Expect = 6e-32 Identities = 146/185 (79%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 27439 ACTATTACTCTTGAGGTTGAGTCAGGT--GATAGCATTGCAAATTTGAAGGCTAAAATTC 27496 || |||||| | ||||||||| || | || | ||||| || |||||||||| || | Sbjct 8468 ACCATTACTTTGGAGGTTGAG--AGCTCAGACACCATTGACAACGTGAAGGCTAAGATAC 8525 Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556 | ||||| ||||| || ||||||||||||||| | || ||||||||||| |||||||| | Sbjct 8526 AAGACAAAGAGGGTATCCCTCCAGACCAGCAGAGGCTCATTTTTGCTGGAAAGCAACTTG 8585 Query 27557 AGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCT 27616 | |||| |||||| | || || ||||| |||| ||||||||||| |||||||| ||| Sbjct 8586 AAGATGGCCGTACCTTGGCCGATTATAACATCCAGAAGGAATCCACCCTTCATCTTGTCC 8645 Query 27617 TGCGT 27621 | ||| Sbjct 8646 TTCGT 8650 Score = 152 bits (168), Expect = 6e-32 Identities = 167/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || ||||| || ||||| || ||| | ||||||||| || | Sbjct 12961 ATGCAGATTTTCGTCAAAACTCTTACTGGTAAGACGATAACTTTGGAGGTTGAG--AGCT 13018 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| |||||||||| || ||||||||| |||| ||||| | || | Sbjct 13019 CAGACACGATTGACAATGTGAAGGCTAAGATACAGGACAAGAAGGGCATTCCCTCGGATC 13078 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | ||||||||||| ||||| |||| |||| || ||| |||| || || | Sbjct 13079 AGCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGTAGATGGCCGAACCTTAGCTGATTACA 13138 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | |||| ||||||||||| |||||||| ||| | ||||| Sbjct 13139 ACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGTCT 13178 Score = 136 bits (150), Expect = 5e-27 Identities = 164/228 (72%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| ||||| || ||||| | Sbjct 13189 ATGCAGATCTTTGTTAAGACTTTGACTGGAAAGACCATTACACTGGAGGTAGNNNNNNNN 13248 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| ||||||| ||||| ||||||||||||||||| || ||||| ||| Sbjct 13249 NNNNN-------AATGTGAAGGCAAAAATACAGGACAAGGAGGGAATCCCACCAGATCAG 13301 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||| |||||| | ||||||| | ||||| || ||||| || Sbjct 13302 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAAC 13361 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| | |||||| | || |||||||| ||||| |||||| Sbjct 13362 ATTCAGAAGGAGTATACTCTTTACCTTGTCTTGCGCCTTCGTGGTGGA 13409 Score = 118 bits (130), Expect = 1e-21 Identities = 136/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | || || ||||| |||||| | ||||| || || | Sbjct 8663 ATGCAGATCTTTGTGAAGACTTTGACAGGGAAGACCATTACTTTGGAGGTAGAA--AGTT 8720 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| || | ||| | ||||| ||||| ||||||||||| ||||| || ||||| | Sbjct 8721 CAGATACAATCGATAATGTTAAGGCAAAAATACAGGACAAGGAAGGAATCCCACCAGATC 8780 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| |||||| | ||||||| | ||||| || ||||| | Sbjct 8781 AGCAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACA 8840 Query 27584 A 27584 | Sbjct 8841 A 8841 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || ||||||||||| |||||||| || |||| ||||| | || || ||||| |||| Sbjct 39074 CTCATTTTTGCTGGAAAGCAACTTGAAGATGGCCGTACTTTGGCCGATTATAACATCCAG 39015 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 ||||||||||| |||||||| ||| | ||| Sbjct 39014 AAGGAATCCACCCTTCATCTTGTCCTTCGT 38985 >seq9364 Length=1264 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| || || || ||||| || || || ||||| ||| | Sbjct 510 ATGCAAATCTTTGTGAAGACTCTCACTGGAAAGACCATCACCCTCGAGGTGGAGAGTTCT 451 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || ||||| ||||| |||||||| || ||||||||| Sbjct 450 GACACCATAGACAATGTCAAGGCCAAGATTCAAGACAAAGAGGGAATCCCACCAGACCAG 391 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||||||||| ||||| ||||| |||| | ||| |||| || || || Sbjct 390 CAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACCTTAGCTGATTACAAC 331 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct 330 ATCCAGAAAGAATCCACTCTTCATCTTGTCTTGCGACTTCGTGGTGG 284 Score = 179 bits (198), Expect = 4e-40 Identities = 186/239 (78%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 27397 ATTACTATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455 |||| |||| |||||||||||||||||||| || || || ||||| ||||||||||| || Sbjct 747 ATTA-TATAGATGCAAATCTTTGTCAAGACCCTCACTGGTAAGACCATTACTCTTGAAGT 689 Query 27456 TGAGTCAGGT--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATT 27513 |||| || | |||| ||| | ||| | ||||| |||||||| || ||||| || || Sbjct 688 TGAG--AGTTCCGATACCATAGACAATGTTAAGGCCAAAATTCAAGATAAGGAAGGGATC 631 Query 27514 CCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTA 27573 || || |||||||||||| | ||||||||||| || || || ||||| | || ||||| Sbjct 630 CCACCGGACCAGCAGCGTTTGATTTTTGCTGGAAAACAGCTGGAGGACGGGCGGACCCTT 571 Query 27574 GCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || || |||||||||| ||||| || ||| | || | ||||| || ||||| Sbjct 570 GCCGATTACAACATCCAAAAGGAGTCCACCCTCCATTTGGTTCTCCGTCTCCGTGGTGG 512 Score = 172 bits (190), Expect = 6e-38 Identities = 170/218 (78%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| ||||| ||||||||||||||| | ||||||||| || | Sbjct 282 ATGCAGATTTTTGTGAAGACCCTTACTGGCAAGACTATTACTTTGGAGGTTGAG--AGCT 225 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| |||| ||||| ||||||||||||||||| || || ||||||| Sbjct 224 CAGACACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCCCCAGACC 165 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | || |||||||| ||||| ||||| |||| || || | || || || | Sbjct 164 AGCAAAGGTTGATCTTTGCTGGAAAGCAGCTCGAAGATGGGCGAACTTTGGCCGATTACA 105 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 | |||| ||||||||||| |||||||| ||| | ||| Sbjct 104 ACATCCAGAAGGAATCCACCCTTCATCTTGTCCTTCGT 67 >seq5139 Length=1344 Score = 159 bits (176), Expect = 4e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 || |||||||| || ||||| || || |||||||| || |||| || |||||| || | Sbjct 1097 ATACAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCGCTCTCGAAGTTGAG--AGTT 1154 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| | ||||| || ||||| || ||||| || | || || |||| Sbjct 1155 CAGATACCATAGACAATGTTAAGGCCAAGATTCAAGATAAGGAAGGGAACCCACCGGACC 1214 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| ||||||||||| ||||| || ||||||| |||||||| || || || | Sbjct 1215 AGCAGCGTCTGATTTTTGCTGGAAAGCAGCTGGAGGATGGGCGTACCCTTGCCGATTACA 1274 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||||| ||||| || ||| | || | ||||| | ||||| Sbjct 1275 ACATCCAAAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTCCATGGTGG 1323 >seq1 Length=28142018 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || ||||||||||| | Sbjct 1587159 ATGCAGATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCCTTGAGGTTGAAAGCTCT 1587100 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || ||||||||||| ||||| || ||||||||| Sbjct 1587099 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAG 1587040 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || ||||| | ||||| | || || || ||| Sbjct 1587039 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGACGGCCGTACTTTGGCCGATTACAAT 1586980 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || ||||||||||| ||||| Sbjct 1586979 ATCCAGAAGGAGTCAACCCTCCACCTTGTGTTGCGTCTTCGTGGTGG 1586933 Score = 147 bits (162), Expect = 2e-30 Identities = 131/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| |||||||| ||||||||||||||||||||||| | Sbjct 1586931 ATGCAAATCTTTGTGAAGACCCTTACCGGAAAGACTATTACTCTTGAGGTTGAAAGCTCT 1586872 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| || || || |||||||| ||||| || ||||||||| Sbjct 1586871 GACACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCAG 1586812 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTAC 27569 ||| | | || ||||| || ||||| || ||||||| ||||| Sbjct 1586811 CAGAGGTTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTAC 1586768 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | || || ||||| || || | ||||| ||| || | Sbjct 1586409 ATGCAGATTTTTGTCAAGACCTTGACTGGTAAGACCATAACCTTGGAGGTGGAG--AGCT 1586352 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| ||||||| ||||||||||| ||||| || || || || || | Sbjct 1586351 CAGATACCATTGATAATGTGAAGGCCAAAATTCAGGATAAGGAAGGTATCCCACCTGATC 1586292 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || || || || || | ||||||| | ||||| || ||||| | Sbjct 1586291 AGCAGAGGCTGATCTTCGCAGGGAAACAGTTGGAGGATGGAAGGACCCTTGCTGACTACA 1586232 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| ||||| ||||| || || | |||||||| ||||| Sbjct 1586231 ACATTCAGAAGGAGTCCACCCTTCACCTTGTGCTCCGTCTTCGTGGTGG 1586183 Score = 138 bits (152), Expect = 1e-27 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| | ||||| ||||| || || | ||||| ||| || | Sbjct 1586637 ATGCAGATATTTGTCAAGACTTTGACCGGTAAGACCATAACCTTGGAGGTGGAG--AGCT 1586580 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| | |||||||| || ||||| ||||| || ||||| ||||| | Sbjct 1586579 CAGACACCATTGACAATGTCAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCAGATC 1586520 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || ||||| || || ||| | || |||| | ||||| || || || | Sbjct 1586519 AGCAGAGGTTGATCTTTGCAGGCAAACAATTGGAAGATGGAAGGACCCTTGCGGATTACA 1586460 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||||||||| || || ||||| | | ||||| Sbjct 1586459 ATATCCAGAAGGAGTCCACTCTTCACCTTGTGCTGCGTTTGAGGGGTGG 1586411 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || || ||||| ||||| || || |||||||| ||| | Sbjct 1587387 ATGCAAATCTTCGTGAAAACACTCACCGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 1587328 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | || || || || ||||||||||| ||||||||||| |||||| Sbjct 1587327 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAG 1587268 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || || ||||| | || || | | || || || || || ||| Sbjct 1587267 CAACGTCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGAAGGACTCTTGCTGATTACAAT 1587208 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| |||||||| || | ||||| || || || Sbjct 1587207 ATTCAGAAGGAGTCCACGCTTCATCTTGTTCTCCGTCTGCGTGGAGG 1587161 >seq28626 Length=87040 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| |||||| | || || ||||| |||||||||||||| ||| Sbjct 42364 AATGCAGATTTTTGTGAAGACGTTGACGGGGAAGACGATTACTCTTGAGGTGGAGAGTTC 42305 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| ||| ||||||| || |||||||| |||||||| ||||| || || || Sbjct 42304 TGATACTATTGATAATGTGAAGGCCAAGATTCAGGATAAGGAGGGGATTCCACCTGATCA 42245 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| | || ||||| ||||| || || ||||||| | || || || || ||||| Sbjct 42244 ACAGCGATTGATCTTTGCCGGTAAACAGCTTGAGGATGGATGAACTCTTGCTGATTATAA 42185 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || ||||| || ||||| || || | | || || ||||| Sbjct 42184 TATTCAGAAAGAATCTACACTTCACCTTGTTCTCAGGCTCCGTGGTGG 42137 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || |||||||| || || || || ||||| || || Sbjct 42591 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCCTCC 42532 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | || || ||||| || |||||||| ||||||||||| || ||| Sbjct 42531 GATACCATCGACAACGTCAAAGCCAAAATCCAAGACAAGGAAGGAATTCCTCCTGATCAG 42472 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || |||||| | || |||| | || || || || |||||| Sbjct 42471 CAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGGACTCTTGCGGATTATAAT 42412 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAG-TCTTGCGTCTTCGCGGTGGA 27633 |||| || || || || || ||| | | |||| || | ||||||||| Sbjct 42411 ATCCAGAAAGAGTCTACGCTACATTTGGTTCTTAGGT-TGCGCGGTGGA 42364 >seq28674 Length=75340 Score = 145 bits (160), Expect = 9e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| |||||| | || || ||||| |||||| | ||||| ||| Sbjct 21043 AATGCAGATTTTTGTGAAGACGTTGACGGGAAAGACGATTACTTTGGAGGTGGAGAGTTC 21102 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| ||| ||||||| || |||||||| |||||||| ||||| || || || Sbjct 21103 TGATACTATTGATAATGTGAAGGCGAAGATTCAGGATAAGGAGGGGATTCCACCTGATCA 21162 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | || ||||||||||| || || || |||| | || || || || ||||| Sbjct 21163 GCAGCGATTGATCTTTGCTGGTAAACAGCTTGAAGATGGAAGGACTCTTGCTGATTATAA 21222 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || ||||| || ||||| || || | | || || ||||| Sbjct 21223 TATTCAGAAAGAATCTACGCTTCACCTTGTTCTCAGGCTCCGTGGTGG 21270 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || || || ||||| || || || || || || || || | Sbjct 20816 ATGCAAATCTTCGTCAAAACCCTAACTGGCAAAACCATCACACTCGAAGTCGAATCTTCT 20875 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || ||||| || || || ||||||||||| || || Sbjct 20876 GACACAATCGACAACGTGAAGGCAAAGATTCAAGATAAAGAAGGAATTCCTCCTGATCAA 20935 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || |||||| | || |||| | | || || || || |||||| Sbjct 20936 CAACGATTGATCTTTGCAGGAAAGCAATTGGAAGATGGTAGAACTCTTGCTGATTATAAT 20995 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAG-TCTTGCGTCTTCGCGGTGGA 27633 |||| || || || || |||||| | | |||| || | || |||||| Sbjct 20996 ATCCAGAAAGAGTCTACGCTTCATTTGGTTCTTAGGT-TACGTGGTGGA 21043 >seq28613 Length=6376 Score = 98.7 bits (108), Expect = 1e-15 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556 |||||||||| || || ||||| ||||||||| | | ||||||||||||||||| || | Sbjct 5466 AGGACAAGGAAGGTATCCCTCCTGACCAGCAGAGGTTGATTTTTGCTGGTAAGCAGCTGG 5525 Query 27557 AGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 | |||| || || || || || ||||| | ||||||||||| || ||||| Sbjct 5526 AAGATGGCCGCACTCTTGCTGATTATAACATTCAAAAGGAATCAACGCTTCA 5577 >seq2 Length=32560536 Score = 98.7 bits (108), Expect = 1e-15 Identities = 204/301 (68%), Gaps = 2/301 (1%) Strand=Plus/Plus Query 64554 CGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGT 64613 ||||| ||||||| |||| |||| ||| ||||||| | | | | ||| || | Sbjct 19587084 CGAAAATATTCATTCTGAGATGTATAGTCTCTTGATTGAAACTTATATCAATGATTCTAT 19587143 Query 64614 CGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGA 64673 |||||| || | |||| || || ||||| | || | | | || || ||||| Sbjct 19587144 TGAGAAGAATCGTTTGTTTCATGCAATTGAGACGATTCCGTGTATCGCGAAGAAAGCTGA 19587203 Query 64674 ATGGGCCATCCGGTGGAT-GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTG 64732 ||||| || ||||| || || | | || |||| | | | ||| ||||||| Sbjct 19587204 TTGGGCTATGAAATGGATCGATTCATCTGAT-TCATTTGCTGAAAGAATCGTTGCTTTTG 19587262 Query 64733 CCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGC 64792 | ||||| ||||| || || |||||||| || ||| | ||||||||||| ||||| | Sbjct 19587263 CTTGTGTTGAAGGTATATTTTTTTCTGGAAGTTTTTGTGCAATTTTCTGGCTTAAAAAAC 19587322 Query 64793 GGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCC 64852 | || | ||||| ||| | | ||||| |||||||| || || || ||||| || || | Sbjct 19587323 GTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCACGTGACGAAGGTCTTC 19587382 Query 64853 A 64853 | Sbjct 19587383 A 19587383 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || ||||||||||| || || |||||||| |||||| || Sbjct 5974709 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACCCTTGAGGTCGAGTCAAGT 5974650 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | || | ||| | || ||||| ||||||||||| || || Sbjct 5974649 GACACTATCGATAATGTCAAAGCTAAGATTCAGGACAAAGAAGG 5974606 >seq6 Length=22682783 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 |||||||| || || |||||||| | ||||| || || |||||||| || |||| || Sbjct 2585836 GGAATTCCCCCGGATCAGCAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGATGGACGC 2585895 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || | || || || ||| |||| |||||||| ||||||||||| || | | ||||| Sbjct 2585896 ACTTTGGCTGATTACAATATCCAGAAGGAATCAACTCTTCATCTTGTTCTCAGGCTTCGT 2585955 Query 27628 GGTGGA 27633 |||||| Sbjct 2585956 GGTGGA 2585961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570032010107120