Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1039 95.1 1e-14 seq1436 93.3 4e-14 seq322 93.3 4e-14 seq23 91.5 1e-13 seq933 89.7 4e-13 seq426 86.0 5e-12 seq276 86.0 5e-12 seq78 86.0 5e-12 seq37 86.0 5e-12 seq147 84.2 2e-11 seq1740 82.4 7e-11 seq1642 82.4 7e-11 >seq1039 Length=240209 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||||||| | ||| |||||| || || | || |||||||| ||||| || ||| Sbjct 129209 GATAAAGAAGGTATTCCCCCAGATCAGCAGAGGTTGATTTTTGCGGGAAAACAGCTCGAA 129150 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| || ||| |||| ||||| || || ||||| || || ||||||||| | ||||| Sbjct 129149 GATGGCAGAACCCTGGCTGATTATAACATCCAGAAAGAGTCAACTCTTCACCTTGTGTTG 129090 Query 29175 CG 29176 || Sbjct 129089 CG 129088 >seq1436 Length=88924 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| | || || |||||||| || |||| ||| || | Sbjct 7264 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAAACCATCACACTCGAAGTTGAATCCTCT 7205 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| || ||| ||||||||||| | || ||||| Sbjct 7204 GACACAATCGACAACGTGAAGGCGAAGATTCAGGATAAAGAAGGAATTCCTCCTGATCAG 7145 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || ||| |||||||| | |||| | || ||||| ||| Sbjct 7144 CAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGAACTCTTGCGGATTATAAT 7085 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 || ||||| || ||||| ||||| |||| Sbjct 7084 ATCCAGAAAGAGTCTACGCTTCATTTGGT 7056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || ||||||| | || || |||||||| || |||| ||| || | Sbjct 38991 ATGCAAATCTTTGTCAAAACCCTAACTGGAAAAACCATCACACTCGAAGTTGAATCCTCC 38932 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| || ||| ||||||||||| | || ||||| Sbjct 38931 GACACAATCGACAACGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCTGATCAG 38872 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || ||| |||||||| | |||| | || ||||| ||| Sbjct 38871 CAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGAACTCTTGCGGATTATAAT 38812 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||| || || || ||||| | ||| | || || || |||||| Sbjct 38811 ATCCAGAAAGAGTCCACGCTTCATTTAGTGCTTCGGTTGCGTGGAGGG 38764 >seq322 Length=397916 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| ||||| | || |||||| || || ||||||||||| || |||||||| || Sbjct 312436 GATAAGGAAGGAATCCCTCCAGATCAGCAGAGGCTTATCTTTGCAGGGAAACAACTTGAG 312377 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | || |||||||| || |||||||||||||| ||||| ||||| | Sbjct 312376 GATGGAAGAACCCTAGCAGATTACAACATACAGAAGGAATCTACCCTTCATTTGGTGCTT 312317 Query 29175 CGATTACGAGGAGG 29188 |||| |||| || Sbjct 312316 AGATTGAGAGGTGG 312303 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| |||||| | || || ||||| || |||||||| ||| || ||| || | Sbjct 312757 ATGCAGATATTCGTTAAGACCTTGACTGGAAAAACCATCACCCTTGAGGTTGAATCCTCC 312698 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || || || ||||| || | || ||||| Sbjct 312697 GATACAATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGATCAG 312638 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || || ||||| || ||| | ||| | || |||||||| Sbjct 312637 CAGAGGCTTATCTTTGCAGGGAAGCAACTTGAGGATGGAAGAACCCTAGCTGATTACAAC 312578 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || |||||||||||||| ||||| ||||| | |||| |||| || Sbjct 312577 ATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGG 312531 Score = 89.7 bits (98), Expect = 4e-13 Identities = 101/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 ||||||||| || |||||||| ||| | || | || || || || || || ||||| Sbjct 333330 AAGCAAAAA-TTCAGGATAAAGAGGGTATTCCTCTGGACCAGCAGAGGCTAATTTTTGCC 333272 Query 29100 GGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACT 29159 ||||| || |||||||| ||| |||| ||||| ||||| ||||||||||||||| Sbjct 333271 GGCAAGCAGTTGGAAGATGGTTGTACTCTGGCTGATTATAATATCCAGAAGGAATCTACT 333212 Query 29160 CTTCACATGGTGTT 29173 || ||| |||| || Sbjct 333211 CTCCACCTGGTTTT 333198 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||| || | || |||||| || || ||||||||||| || ||||| || || Sbjct 312208 GATAAAGAGGGAATCCCTCCAGATCAGCAGAGGCTTATCTTTGCAGGGAAACAGCTTGAG 312149 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | || |||||||| || |||||||||||||| ||||| |||| | Sbjct 312148 GATGGAAGAACCCTAGCTGATTACAACATACAGAAGGAATCTACCCTTCATTTGGTACTT 312089 Query 29175 CGATTACGAGGAGG 29188 |||| |||| || Sbjct 312088 AGATTGAGAGGTGG 312075 >seq23 Length=202804 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| ||||||| | || || |||||||| || |||| ||| | || Sbjct 5488 ATGCAAATCTTCGTCAAAACCCTAACCGGAAAAACCATCACACTCGAAGTCGAATCATCA 5547 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| || ||| ||||| ||||| | || ||||| Sbjct 5548 GACACAATCGACAACGTGAAGGCGAAGATTCAAGATAAGGAAGGGATTCCACCTGATCAG 5607 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| || | |||||||| || ||||| || || ||| | ||| | || ||||| ||| Sbjct 5608 CAACGATTGATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTTGCTGATTATAAT 5667 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 |||||||| |||||||| ||||| Sbjct 5668 ATTCAGAAAGAATCTACACTTCA 5690 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | ||||| | || ||||||||||| ||| || ||| || | Sbjct 5260 ATGCAAATCTTCGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCCTCC 5319 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | || |||||| || || ||||| | || ||||||| Sbjct 5320 GACACCATCGACAACGTCAAAGCCAAAATTCAAGACAAGGAAGGAATTCCACCAGATCAA 5379 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || ||||| || || |||||||| |||||| | ||| | ||||||||||| Sbjct 5380 CAACGTCTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGTACTCTTGCCGATTACAAC 5439 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 || || || ||||| || || || Sbjct 5440 ATCCAAAAAGAATCCACGCTCCA 5462 >seq933 Length=173040 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| |||||| | || || ||||| || |||||||| ||| || ||| || | Sbjct 29241 ATGCAGATATTCGTTAAGACCTTGACTGGAAAAACCATCACCCTTGAGGTTGAATCCTCC 29300 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || || || ||||| || | || ||||| Sbjct 29301 GATACAATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGATCAG 29360 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || ||||||||||| || || ||||| || ||| | ||| | || |||||||| Sbjct 29361 CAGAGGCTTATCTTTGCAGGGAAGCAACTTGAGGATGGAAGAACCCTAGCTGATTACAAC 29420 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || |||||||||||||| ||||| ||||| | |||| |||| || Sbjct 29421 ATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGG 29467 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | || ||||| || || ||||||||||| || || ||||| || Sbjct 29562 GATAAGGAAGGTATCCCTCCCGATCAGCAGAGGCTTATCTTTGCAGGGAAGCAACTTGAG 29621 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | || |||||||| || |||||||||||||| ||||| ||||| | Sbjct 29622 GATGGAAGAACCCTAGCTGATTACAACATCCAGAAGGAATCTACCCTTCATTTGGTGCTT 29681 Query 29175 CGATTACGAGGAGG 29188 |||| |||| || Sbjct 29682 AGATTGAGAGGTGG 29695 >seq426 Length=522792 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| ||||||| | ||||| || || || ||| ||| ||| | Sbjct 162821 AAGATGCAGATCTTCGTCAAAACCCTAACGGGTAAGACGATAACCCTCGAGGTTGAATCT 162762 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | | | ||| ||||| || || ||||| | || ||| Sbjct 162761 TCTGATACCATCGACAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCACCGGAT 162702 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| |||| ||||| || || ||||| || ||||| | ||| | ||||| ||| Sbjct 162701 CAACAACGACTCATCTTCGCAGGAAAACAGCTTGAAGACGGCCGCACTCTTGCCGACTAC 162642 Query 29139 AATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| ||||||||||| ||||||||| Sbjct 162641 AATATCCAGAAGGAATCAACTCTTCAC 162615 >seq276 Length=436033 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| ||||||| | ||||| || || || ||| ||| ||| | Sbjct 192252 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACGATAACCCTCGAGGTTGAATCT 192311 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | | | ||| ||||| || || ||||| | || ||| Sbjct 192312 TCTGATACCATCGACAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCACCGGAT 192371 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| |||| ||||| || || ||||| || ||||| | ||| | ||||| ||| Sbjct 192372 CAACAACGACTCATCTTCGCCGGAAAACAGCTTGAAGACGGCCGCACTCTTGCCGACTAC 192431 Query 29139 AATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| ||||||||||| ||||||||| Sbjct 192432 AATATCCAGAAGGAATCAACTCTTCAC 192458 >seq78 Length=963227 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| ||||||| | ||||| || || || ||| ||| ||| | Sbjct 597900 AAGATGCAGATCTTCGTCAAAACCCTAACGGGTAAGACGATAACCCTCGAGGTTGAATCT 597841 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | | | ||| ||||| || || ||||| | || ||| Sbjct 597840 TCTGATACCATCGACAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCACCGGAT 597781 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| |||| ||||| || || ||||| || ||||| | ||| | ||||| ||| Sbjct 597780 CAACAACGACTCATCTTCGCCGGAAAACAGCTTGAAGACGGCCGCACTCTTGCCGACTAC 597721 Query 29139 AATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| ||||||||||| ||||||||| Sbjct 597720 AATATCCAGAAGGAATCAACTCTTCAC 597694 >seq37 Length=1182629 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | || || ||||| || || ||||| ||| || |||| | || Sbjct 292168 ATGCAAATATTTGTGAAGACTTTGACCGGAAAGACCATAACCTTGGAGGTGGAAAGCTCA 292109 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || || ||||| || ||| | ||| |||||| Sbjct 292108 GACACCATTGACAATGTCAAGGCTAAGATCCAGGATAAGGAGGGTATTCCCCCAGATCAG 292049 Query 29082 CAAAGACTTATCTTTGCGGGC-AAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || | |||||||| || ||||| |||||||| | || | || |||||||| Sbjct 292048 CAGAGGTTGATCTTTGCTGGATAAACAGTTGGAAGATGGAAGGACCCTTGCGGATTACAA 291989 Query 29141 TATTCAGAAGGAATCTACTCTTCA 29164 ||| |||||||| ||||| ||||| Sbjct 291988 TATCCAGAAGGAGTCTACCCTTCA 291965 >seq147 Length=403342 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/209 (69%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| ||||||| | ||||| || || || ||| ||| | | | Sbjct 352523 AAGATGCAAATCTTCGTCAAAACCCTAACGGGTAAGACGATAACCCTCGAGGTTGGATCT 352464 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAA--GAAGGTGTGCCCGTAG 29076 | || || | | | | | ||| | ||||| || ||| | ||||| | || | Sbjct 352463 TCTGATACCATCGACAACGTCAAGGACAAAAT--CCAATACAAGGAAGGAATTCCACCGG 352406 Query 29077 ATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATT 29136 |||||||| ||| ||||| ||||| ||||| || ||||| || || | ||||| | Sbjct 352405 ATCAACAACAACTCATCTTCGCGGGAAAACAGCTTGAAGACGACAGGGCTCTTGCCGACT 352346 Query 29137 ACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||||| ||||||||||| ||||| ||| Sbjct 352345 ACAATATCCAGAAGGAATCAACTCTCCAC 352317 >seq1740 Length=56962 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || |||||||| || || ||||| ||| ||| ||| || Sbjct 22349 ATGCAGATCTTTGTGAAGACATTGACCGGAAAGACCATCACCTTGGAAGTAGAAAGTTCA 22408 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| |||||| || || ||||| | || |||||| Sbjct 22409 GACACAATTGATAATGTCAAGGCAAAAATACAGGACAAGGAAGGAATCCCACCAGATCAG 22468 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || ||| |||| ||| | ||| | || || ||||| Sbjct 22469 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACTCTTGCTGACTACAAC 22528 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||||||| || ||||||||| | ||||| || Sbjct 22529 ATTCAGAAGGAGTCCACTCTTCACCTTGTGTTGCG 22563 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | || |||||||| || ||||||||||| || ||| | || Sbjct 42769 ATGCAAATCTTTGTGAAGACATTGACAGGTAAAACCATTACTATTGAGGTGGAGAGCTCA 42710 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | |||| ||| || || || ||||| ||| | || ||| || Sbjct 42709 GACACAATTGACAATCTGAAGGCTAAGATACAGGACAAAGAGGGTATCCCTCCAGACCAG 42650 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || || ||||| || || || || |||||| || |||| | | ||||| || Sbjct 42649 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACTCTTGATGATTATAAC 42590 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || ||||| || || ||||||||| | || || || Sbjct 42589 ATCCAGAAAGAGTCAACTCTTCACCTTGTCTTGCG 42555 >seq1642 Length=65368 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | || || ||||| || || ||||||||| || ||| || Sbjct 33995 ATGCAAATCTTTGTGAAGACGTTGACTGGAAAGACCATTACCTTAGAGGTAGAAAGTTCA 34054 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| |||||| || || || || | || ||||||| Sbjct 34055 GACACCATAGATAATGTGAAGGCAAAAATACAGGACAAGGAGGGAATCCCGCCAGATCAA 34114 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || ||| |||| ||| | ||| | || || ||||| Sbjct 34115 CAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACTCTTGCTGACTACAAC 34174 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||||||| |||||||||||| | || || || Sbjct 34175 ATTCAGAAGGAGTCTACTCTTCACCTTGTTTTGCG 34209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428192837258720