Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07-
20] 27,424 sequences; 471,834,188 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq23 131 1e-25
seq1436 123 2e-23
seq1740 116 3e-21
seq322 116 3e-21
seq1642 109 4e-19
seq933 105 5e-18
seq37 100 2e-16
seq426 93.3 3e-14
seq276 93.3 3e-14
seq78 93.3 3e-14
seq1039 89.7 4e-13
>seq23
Length=202804
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | ||| || ||||| |||||||| |||||||||||| ||| | | | |||||
Sbjct 5469 AACGAGATGGAGCGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTACGGCCATCTTC 5410
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| |||||| || ||| | || | ||||||||| || |||||||||||| |||||
Sbjct 5409 GAGTTGTTTTCCGGCGAAGATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTGTCTTG 5350
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||||||| || || | || ||||| ||| |||||| |||| ||| ||||||||
Sbjct 5349 AATTTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTT 5290
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| || || ||||||||
Sbjct 5289 GCCGGTTAGGGTTTTCACGAAGATTTGCAT 5260
>seq1436
Length=88924
Score = 123 bits (136), Expect = 2e-23
Identities = 150/203 (74%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| || ||||| |||||||| |||||||||||| ||| ||| ||||||| | ||||
Sbjct 39017 TGGAGTGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCGTCTTCGAGTTGT 39076
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | || | ||| |||||||| |||||||||||| ||||| ||||||
Sbjct 39077 TTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATTTTG 39136
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
|| || | || ||||| ||| |||||| |||| ||| |||||||| || ||
Sbjct 39137 GCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGT- 39195
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
|| ||||| || || || |||||
Sbjct 39196 AGGGTTTTCACGAAGATCTGCAT 39218
Score = 122 bits (134), Expect = 6e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | ||| || ||||| |||||||| |||||||||||| ||| | | |||||||
Sbjct 7283 AACGAGATGGAGTGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCCGTCTTC 7342
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| |||||| || ||| | || | ||| || ||||| |||||||||||| |||||
Sbjct 7343 AAGTTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTG 7402
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|||||| || || | || ||||| || |||||| |||| ||| ||||||||
Sbjct 7403 GATTTTGGCTTTGACGTTGTCGATGGTGTCAGAGGATTCTACCTCTAGGGTTATGGTTTT 7462
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| ||||| || |||||
Sbjct 7463 GCCGGTTAGGGTTTTCACAAAGATCTGCAT 7492
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
||||||||||| ||||| ||||| || || || ||||| ||| ||||| | |||||
Sbjct 38783 ACTAAATGAAGCGTGGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCATCTTCC 38842
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
||||| || || || | ||||| || || || || || ||||||||||| || |
Sbjct 38843 AATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGGATTCCTTCTTTATCCTGA 38902
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| || | || || || ||| ||| || || | || ||||||||
Sbjct 38903 ATCTTCGCCTTCACGTTGTCGATTGTGTCGGAGGATTCAACTTCGAGTGTGATGGTTTTT 38962
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| ||||| ||||||||
Sbjct 38963 CCAGTTAGGGTTTTGACAAAGATTTGCAT 38991
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| | ||| || | ||| |||||||| || || ||||| || || || |||||
Sbjct 7038 CCACCACGCAACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGATATTATAATCCGCA 7097
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| ||||| | ||||| ||||| || || || | ||||| || || || || |||
Sbjct 7098 AGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGA 7157
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
||||||||||| || ||| || ||| || | || || || || ||| ||
Sbjct 7158 ATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGGATTCAACT 7217
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | || |||||||| || || || ||||| || || ||||||||
Sbjct 7218 TCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACGAAGATTTGCAT 7264
>seq1740
Length=56962
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
|||||||||||| || || || ||||||||||| || | || | ||||| | ||
Sbjct 43583 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCTAATGTCCTGCCATCTTCAAGCTG 43642
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
||| ||||| | || | | ||||||||| |||||| ||||| ||||| ||| ||
Sbjct 43643 TTTTCCAGCAAAAATTAGCCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTT 43702
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
| ||| ||| | ||||||||||| | | ||||| || | ||| | ||| || || ||
Sbjct 43703 GACCTTGACATTATCTATGGTATCCGAACTCTCTACCTCAAGGGTGACGGTCTTTCCAGT 43762
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
||||| || ||||| ||||||||
Sbjct 43763 GAGAGTCTTCACAAAGATTTGCAT 43786
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCTTAGAATTCTCGCGTC 15210
|| || | |||||||||||| ||||| || ||||||||||| ||| || | || | ||
Sbjct 21876 AAGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCTAAG-GTCCTGCCATC 21818
Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270
||| | || || ||||| | ||||| | ||| ||||| ||| ||||| ||||||||
Sbjct 21817 TTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTC 21758
Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||| ||| ||| ||| | |||||||| || | || || || | ||| |||||
Sbjct 21757 TTGAATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGT 21698
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || || || |||||||| || ||||||
Sbjct 21697 CTTTCCAGTGAGGGTCTTTACAAAGATCTGCATA 21664
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||| |||||||| || ||||| ||||||||||| || | | | | || ||
Sbjct 21645 ACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCC 21586
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
|| || || ||||| | |||| ||| || ||||| ||| || ||||| || || |
Sbjct 21585 AACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCTTGA 21526
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| || ||| | ||||||||||| | | || || || | ||||||||||||
Sbjct 21525 ATCTTGGCTTTAACATTGTCTATGGTATCAGAACTCTCAACTTCGAGAGTAATGGTTTTA 21466
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || || ||||| ||||||||
Sbjct 21465 CCAGTGAGGGTCTTGACAAAGATTTGCAT 21437
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| | |||||| || || || || || |||||||| || ||| | || | ||
Sbjct 42102 AAAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCC 42161
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| ||||| || ||||| | ||||| | || || || ||| ||||| || |||||
Sbjct 42162 TCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCC 42221
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
|||||| ||| ||| | || || || || | ||||||| ||||||||||||||
Sbjct 42222 TGTATTTTGGCCTTGACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTAATGGTC 42281
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || |||| || || ||||| |||||||||
Sbjct 42282 TTTCCAGTCAAGGTCTTCACAAAGATTTGCATA 42314
Score = 100 bits (110), Expect = 2e-16
Identities = 166/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-G 15193
|||| || ||||| | | || | ||||||||| || || || || ||||||||||| |
Sbjct 42769 TGCCTCCCCTCAAACGAAGGACAAGATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAG 42828
Query 15194 CTTAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGT 15251
| ||| ||| | ||||| | || || ||||| | ||||| | ||| |||||
Sbjct 42829 CC---AATGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCCG 42885
Query 15252 TTGGAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTT 15310
||||| || || ||||| || || ||| |||||| | || || || || | |
Sbjct 42886 GAGGAATGCCCTCCTTGTCCTGGATCTTAGCT-TTTACATTGTCAATCGTGTCTGAACTC 42944
Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || || ||||||||||| ||||||| || ||||||||||| ||||||
Sbjct 42945 TCAACCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTTACAAAAATCTGCATA 42998
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||| | ||||| || ||||| ||||| | | | | | ||||| | ||
Sbjct 42339 TGAAGGGTGAACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCATCTTCCAGCTGC 42398
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| ||||| | ||||| | ||| ||||| || || ||||||||||| || |||
Sbjct 42399 TTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGTATCTTG 42458
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
|||| ||| | || || || || | ||||| || |||||||| || || || ||
Sbjct 42459 GTCTTCACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTTCCGGTA 42518
Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364
||||| || || ||||| ||||||
Sbjct 42519 AGAGTCTTCACGAAAATCTGCATA 42542
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-G 15193
|||| || ||||| | | || | |||||||||||| || || || ||||||||||| |
Sbjct 22121 TGCCTCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAG 22062
Query 15194 CTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTT 15253
| || | | | ||||| || ||||| || || | ||||| | |||||| ||
Sbjct 22061 CCAAG-GTCCGGCCATCTTCCAACTGTTTCCCGGCAAAAATCAACCTTTGTTGATCTGGG 22003
Query 15254 GGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313
||||| || || ||||| ||| || ||| ||| | || || || || | ||
Sbjct 22002 GGAATACCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATAGTGTCTGAGCTCTCA 21943
Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || || || || || || || ||||| || |||||||| ||||||
Sbjct 21942 ACCTCCAAAGTTATTGTCTTTCCGGTAAGAGTCTTCACAAAAATCTGCATA 21892
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| || ||||| | | || | |||||||||||| || || || ||||||||||||
Sbjct 42999 CCGCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 43058
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| ||| | ||||| || ||||| || || | || | | || ||||| ||
Sbjct 43059 AAGGTTCGGCCATCTTCCAACTGTTTTCCGGCAAAAATGAGCCTCTGCTGGTCTGGAGGG 43118
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || || ||||| ||| || ||||||| | || || || || | || ||
Sbjct 43119 ATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAACC 43178
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || ||||| ||||| ||||| || || || |||||||| ||||||
Sbjct 43179 TCCAAAGTAATTGTTTTGCCTGTAAGGGTCTTCACAAAAATCTGCATA 43226
>seq322
Length=397916
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || ||||||||||| || || || |||||||||||||| |
Sbjct 312075 CCACCTCTCAATCTAAGTACCAAATGAAGGGTAGATTCCTTCTGTATGTTGTAATCAGCT 312134
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | || || | ||||| || || | || | | || || || ||
Sbjct 312135 AGGGTTCTTCCATCCTCAAGCTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGG 312194
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||||| ||||| || ||| || ||| || ||| | || || ||||| | | || ||
Sbjct 312195 ATTCCCTCTTTATCCTGAATCTTAGCT-TTCACATTATCGATAGTATCTGAACTCTCAAC 312253
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| ||||| ||||||| ||| || ||||||||||||||
Sbjct 312254 CTCCAAAGTAATAGTTTTTCCTGTCAAAGTCTTAACAAAAATTTGCAT 312301
Score = 114 bits (126), Expect = 9e-21
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || ||||| ||||||||||| || | | | ||||||||||||
Sbjct 312783 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGGCCATCTTCTAATTGT 312842
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279
|| || || | || | | ||| || || |||||| ||||| ||||| || ||
Sbjct 312843 TTACCGGCAAAGATAAGCCTTTGCTGATCAGGTGGAATCCCTTCCTTGTCTTGGATCTTA 312902
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || ||| | ||||||||||| | | || || || | ||| ||||||||||| ||
Sbjct 312903 GCT-TTAACATTGTCTATGGTATCAGAAATCTCCACCTCAAGGGTGATGGTTTTACCGGT 312961
Query 15340 CAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAA 15376
|| ||||| || ||||||||||| | | |||| ||
Sbjct 312962 CAATGTTTTCACGAAAATTTGCATCTGTTCAAATCAA 312998
Score = 113 bits (124), Expect = 3e-20
Identities = 171/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || | || || | ||||||||||| || ||||| |||||||||||
Sbjct 333868 CCACCTCTTAACCGCAACACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCTGCA 333927
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | |||||||||||||| || ||| | || | | ||| || || ||||
Sbjct 333928 AGGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGCCTTTGCTGATCAGGTGGA 333987
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||| ||||| || || ||| || || | ||||||||||| | | || |
Sbjct 333988 ATCCCTTCCTTGTCTTGGATCTTAGCT-TTAACGTTGTCTATGGTATCAGAACTCTCCGC 334046
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375
|| | ||| ||||||||||| ||| ||||| || ||||||||||| | | |||| |
Sbjct 334047 CTCAAGGGTGATGGTTTTACCCATCAATGTTTTCACGAAAATTTGCATCTGTTCAAATCA 334106
Query 15376 A 15376
|
Sbjct 334107 A 334107
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || ||||||||||| || || || |||||||||||||| |
Sbjct 312303 CCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGTATGTTGTAATCTGCT 312362
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | || || | |||||| || || | || | | || || || ||
Sbjct 312363 AGGGTTCTTCCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGG 312422
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| || || ||| || ||| || ||| | || || ||||| | | || ||
Sbjct 312423 ATTCCTTCCTTATCCTGAATCTTAGCT-TTCACATTATCGATAGTATCTGAACTCTCAAC 312481
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| ||||| || || ||||| | ||| || |||||||| |||||
Sbjct 312482 CTCTAAAGTAATAGTCTTTCCTGTTAAAGTCTTCACAAAAATCTGCAT 312529
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| ||||| || ||||| || ||||| ||||| ||||| || |||| | ||
Sbjct 311862 AAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTTCTTCCATCC 311921
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | ||| || ||||| | || | | || || || || || || || || ||
Sbjct 311922 TCAAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCCTCCTTATCC 311981
Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||| || ||| || ||| | || || ||||| | | || || ||||| ||||| ||
Sbjct 311982 TGAATCTTAGCT-TTCACATTATCAATAGTATCTGAACTCTCAACCTCTAAAGTAATAGT 312040
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||| ||||||| ||| || ||||||||||||||
Sbjct 312041 TTTTCCTGTCAAAGTCTTAACAAAAATTTGCAT 312073
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || ||||||||||| || || || || ||||||||||| |
Sbjct 312531 CCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCT 312590
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | || || | ||| || || || | || | | || || || ||
Sbjct 312591 AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGG 312650
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| || ||| ||| ||| | || || |||||| ||| ||
Sbjct 312651 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCGGAGGATTCAACC 312710
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | ||| |||||||| || |||| || || || || || |||||
Sbjct 312711 TCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCAT 312757
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | ||| ||||||||||| || || || || ||||||||||| |
Sbjct 333640 CCACCTCTCAATCTAAGAACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCT 333699
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | || || | ||| || || || | || | | || || || ||
Sbjct 333700 AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCACTGCTGATCAGGAGGG 333759
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| || ||| ||| ||| | || || ||||| ||| ||
Sbjct 333760 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCTGAGGATTCAACC 333819
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||| || |||| || |||| || || || || || ||||||
Sbjct 333820 TCAAGGGTGATAATTTTGCCAGTCAAGGTCTTAACGAATATCTGCATA 333867
>seq1642
Length=65368
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| | ||||| || || || || || |||||||| || ||| | || | ||
Sbjct 34206 AAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCC 34147
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| ||||| || ||||| | ||||| | ||||| || || ||||| || |||||
Sbjct 34146 TCCAATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGCGGGATTCCCTCCTTGTCC 34087
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
||||| ||| ||| | |||||||| || | ||||||| ||||||||||||||
Sbjct 34086 TGTATTTTTGCCTTCACATTATCTATGGTGTCTGAACTTTCTACCTCTAAGGTAATGGTC 34027
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || |||| || || ||||| |||||||||
Sbjct 34026 TTTCCAGTCAACGTCTTCACAAAGATTTGCATA 33994
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||| ||||| || ||||| || ||||||||||| || | | | | || ||
Sbjct 54142 ACCAAATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCTAAAGTCCGACCATCCTCA 54083
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| ||||| ||||| | || | | |||||||| |||||| ||||||||||| |
Sbjct 54082 AGCTGTTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCTGA 54023
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| ||| ||| | ||||||||||| | | || || || | || ||||| ||
Sbjct 54022 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 53963
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || || || || ||||||||
Sbjct 53962 CCAGTGAGGGTCTTAACGAAGATTTGCAT 53934
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| ||||| || ||||| ||||| | | | | | ||||| | ||
Sbjct 33969 TGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCATCTTCCAGCTGC 33910
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| ||||| | ||||| | ||| ||||| || || ||||||||||| || |||
Sbjct 33909 TTTCCAGCAAAAATCAATCTTTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGTATCTTG 33850
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||||||| | || || || || | ||||| || |||||||| || || || ||
Sbjct 33849 GCCTTTACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTCCCGGTA 33790
Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364
||||| || || ||||| ||||||
Sbjct 33789 AGAGTCTTCACGAAAATCTGCATA 33766
Score = 86.0 bits (94), Expect = 5e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||| | ||||| ||||| | |||| | ||||||||| |||||| ||||| |||
Sbjct 32797 TCTTCAAGCTGTTTTCCAGCAAAAATCAGCCTTTGTTGGTCAGGTGGAATACCTTCCTTG 32738
Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328
|| ||| ||| ||| ||| | ||||||||||| | | || || || | |||| |
Sbjct 32737 TCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTAACG 32678
Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || || || || ||||| ||||||||
Sbjct 32677 GTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 32643
>seq933
Length=173040
Score = 105 bits (116), Expect = 5e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || ||||| ||||||||||| || | | | ||||| ||||||
Sbjct 29215 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGGCCATCTTCCAATTGT 29156
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279
|| ||||| | || | | ||| || || |||||| ||||| ||||| || ||
Sbjct 29155 TTACCAGCAAAGATAAGCCTTTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGGATCTTA 29096
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || || | ||||||||||| | | || || || | ||| |||||||| || ||
Sbjct 29095 GCT-TTAACGTTGTCTATGGTATCAGAACTCTCCACCTCAAGGGTGATGGTTTTGCCAGT 29037
Query 15340 CAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAA 15376
|| ||||| || ||||||||||| | | |||| ||
Sbjct 29036 CAATGTTTTCACGAAAATTTGCATCTGTTCAAATCAA 29000
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || ||||||||||| || || || || ||||||||||| |
Sbjct 29695 CCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCT 29636
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | || || | ||| || || || | || | | || || ||| ||
Sbjct 29635 AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCGGGAGGG 29576
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| || || ||| ||| || ||| | || || ||||| | | || ||
Sbjct 29575 ATACCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTATCTGAACTCTCAACC 29516
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| ||||| || || ||||| | ||| || |||||||| |||||
Sbjct 29515 TCTAAAGTAATAGTCTTCCCTGTTAAAGTCTTCACAAAAATCTGCAT 29469
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| | || ||||||||||| || || || || ||||||||||| |
Sbjct 29467 CCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCT 29408
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | || || | ||| || || || | || | | || || || ||
Sbjct 29407 AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGG 29348
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| || ||| ||| ||| | || || |||||| ||| ||
Sbjct 29347 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCGGAGGATTCAACC 29288
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | ||| |||||||| || |||| || || || || || |||||
Sbjct 29287 TCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCAT 29241
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| ||||| || ||||| || ||||| ||||| ||||| || | || | |||
Sbjct 29908 AAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGTGTCCTACCATCT 29849
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | ||| || ||||| | || | | || || ||| || || ||||| || ||
Sbjct 29848 TCAAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGAGGGATACCTTCCTTATCC 29789
Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||| || ||| || ||| | || || ||||| | | || || || || || || ||
Sbjct 29788 TGAATCTTAGCT-TTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTGATAGT 29730
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| ||||||| ||| || ||||||||||||||
Sbjct 29729 CTTTCCTGTCAAAGTCTTCACAAAAATTTGCAT 29697
>seq37
Length=1182629
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | |||||| ||||| || || || ||||||||||| ||| | || |||||||
Sbjct 292920 AACAAGATGAAGCGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCGTCTTC 292979
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
|| || || || ||| | || | |||||| || || ||||||||||| |||||
Sbjct 292980 CAACTGCTTTCCGGCGAAGATGAGACGTTGCTGATCCGGAGGAATTCCTTCCTTGTCCTG 293039
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|| ||| || || | || ||||| || |||| || || | ||| ||||| ||
Sbjct 293040 GATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTT 293099
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAA 15371
|| || |||||||| || || |||||||| | | |||
Sbjct 293100 TCCGGTGAGAGTTTTCACGAAGATTTGCATCTGTAAAA 293137
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| || || || || ||||| || || | || | || || || ||
Sbjct 291737 TGAAGGGTGGACTCCTTCTGAATATTGTAGTCAGCAAGGGTCCTTCCATCCTCCAACTGC 291796
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || || | ||||| | || || || | || || ||||| || || |||||||
Sbjct 291797 TTCCCTGCAAAGATCAACCTCTGCTGATCAGTGGGGATACCTTCCTTATCCTGAATTTTG 291856
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || |||||||| | || || || ||||||||||| ||||| |||
Sbjct 291857 GCCTTCACATTATCAATGGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTACCAGTC 291916
Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364
| ||| || |||||||| ||||||
Sbjct 291917 AAAGTCTTAACAAAAATCTGCATA 291940
>seq426
Length=522792
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || || || || ||||| ||| ||| | | ||||||| | |||
Sbjct 162616 TGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTGT 162675
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | || | |||||||| || |||||||||||| ||||| ||||||
Sbjct 162676 TTTCCTGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTTG 162735
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| || | || |||||||| | ||| || || | ||| || || ||||| ||
Sbjct 162736 GCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGTT 162795
Query 15341 AGAGTTTTTACAAAAATTTGCATATT 15366
|| ||||| || || || ||||| ||
Sbjct 162796 AGGGTTTTGACGAAGATCTGCATCTT 162821
>seq276
Length=436033
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || || || || ||||| ||| ||| | | ||||||| | |||
Sbjct 192457 TGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTGT 192398
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | || | |||||||| || |||||||||||| ||||| ||||||
Sbjct 192397 TTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTTG 192338
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| || | || |||||||| | ||| || || | ||| || || ||||| ||
Sbjct 192337 GCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGTG 192278
Query 15341 AGAGTTTTTACAAAAATTTGCATATT 15366
|| ||||| || || || ||||| ||
Sbjct 192277 AGGGTTTTGACGAAGATCTGCATCTT 192252
>seq78
Length=963227
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || || || || ||||| ||| ||| | | ||||||| | |||
Sbjct 597695 TGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTGT 597754
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | || | |||||||| || |||||||||||| ||||| ||||||
Sbjct 597755 TTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTTG 597814
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| || | || |||||||| | ||| || || | ||| || || ||||| ||
Sbjct 597815 GCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGTT 597874
Query 15341 AGAGTTTTTACAAAAATTTGCATATT 15366
|| ||||| || || || ||||| ||
Sbjct 597875 AGGGTTTTGACGAAGATCTGCATCTT 597900
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || || || |||||||| ||| ||| | | | |||||||| ||
Sbjct 604656 TGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCTTCTAACTGC 604715
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| || ||| | || | |||||| ||||| |||||||||||| ||||| || |||
Sbjct 604716 TTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTG 604775
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
|| ||| | || || || || | || || || | ||| || || || |||||
Sbjct 604776 GCTTTGACATTGTCGATTGTGTCAGAAGACTCAACCTCGAGGGTTATCGTCTTCCCTGTT 604835
Query 15341 AGAGTTTTTACAAAAATTTGCATATTTG 15368
|| ||||| || || || ||||| ||||
Sbjct 604836 AGGGTTTTCACGAAGATCTGCATCTTTG 604863
>seq1039
Length=240209
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| ||||| || ||||| || ||||| || |||||||| || | | | |||| ||
Sbjct 129322 ACCAAATGGAGCGTGGACTCCTTTTGGATATTGTAATCAGCAAGGGTACGCCCGTCCTCC 129381
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| || || ||||| | |||| ||| || ||||| ||| || ||||| || || |
Sbjct 129382 AGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCTTGA 129441
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| ||| ||| | ||||||||||| | | || || || | || ||||| ||
Sbjct 129442 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 129501
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || || || || ||||||||
Sbjct 129502 CCGGTGAGGGTCTTAACGAAGATTTGCAT 129530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362058148845984
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |