Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07-
20] 27,424 sequences; 471,834,188 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1642 140 3e-28
seq1039 140 3e-28
seq933 132 4e-26
seq1436 125 6e-24
seq23 125 6e-24
seq322 120 3e-22
seq1740 118 1e-21
seq37 118 1e-21
seq276 102 7e-17
seq78 102 7e-17
seq426 98.7 9e-16
seq319 84.2 2e-11
>seq1642
Length=65368
Score = 140 bits (154), Expect = 3e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | ||| | ||||| || || || | ||||||||| || || || |
Sbjct 54376 CGCAAGACAAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCA 54317
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || ||||| ||||| |||| ||||| || ||||||||||| ||||||||||||||
Sbjct 54316 TCTTCGAGCTGCTTTCCTGCAAAAATTAACCTCTGCTGATCTGGGGGAATACCTTCTTTA 54257
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || |||||||| | | | ||||||| || || |||| ||||||
Sbjct 54256 TCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGTGATG 54197
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| || || || ||||||||||||||
Sbjct 54196 GTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 54162
Score = 118 bits (130), Expect = 1e-21
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || ||||| |||| || | || | ||| | || || || || || | |||||
Sbjct 34001 TTTGCATACCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTAT 33942
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
|||| || ||| | ||| |||||||| ||||| |||| || ||||||||||| |
Sbjct 33941 AATCAGCCAAAGTCCGGCCATCTTCCAGCTGCTTTCCAGCAAAAATCAATCTTTGCTGGT 33882
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || |||||||||||||| | || || ||||| || | | | |||||| | |
Sbjct 33881 CTGGGGGGATACCTTCTTTGTCCTGTATCTTGGCCTTTACATTGTCAATAGTGTCTGAGC 33822
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | || || || || || |||||||| ||||| || ||||||||
Sbjct 33821 TCTCTACCTCCAAGGTAATAGTCTTCCCGGTAAGAGTCTTCACGAAAATCTGCAT 33767
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCT 94856
|||||| || | ||||| || || || | ||| ||||| ||| | ||| |||||
Sbjct 54143 CACCAAATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCTAA-AGTCCGACCATCCT 54085
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| ||||||||||| ||||||| | || || || ||||| ||||| ||||||||||| |
Sbjct 54084 CAAGCTGTTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCT 54025
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| || ||||| || | | | || || | || || || | |||||||| |
Sbjct 54024 GAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCT 53965
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || || || || ||||| |||||
Sbjct 53964 TGCCAGTGAGGGTCTTAACGAAGATTTGCAT 53934
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | ||| | |||||| ||||| || | ||| || || | ||| | |
Sbjct 34209 CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCA 34150
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| || || || ||||||| || || || |||||||| || || || || |||
Sbjct 34149 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGCGGGATTCCCTCCTTG 34090
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||||||||| || | | ||||| | || || || | || |||
Sbjct 34089 TCCTGTATTTTTGCCTTCACATTATCTATGGTGTCTGAACTTTCTACCTCTAAGGTAATG 34030
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | || ||||||||||| |||||
Sbjct 34029 GTCTTTCCAGTCAACGTCTTCACAAAGATTTGCAT 33995
>seq1039
Length=240209
Score = 140 bits (154), Expect = 3e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||||||| | ||| | ||| || || || || | ||||||||| || || || |
Sbjct 129088 CGCAACACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCA 129147
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || ||||||||||| |||| || || || ||||||||||| ||||||||||||||
Sbjct 129148 TCTTCGAGCTGTTTTCCCGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCTTCTTTA 129207
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || |||||||| | | | ||||||| || || |||| ||||||
Sbjct 129208 TCTTGTATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCTACCTCAAGGGTGATG 129267
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| || || || ||||||||||||||
Sbjct 129268 GTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 129302
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | ||| | |||||| ||||| || | ||| || || | || | |
Sbjct 128632 CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCA 128691
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| || || || ||||||| || || ||||||||||| || || || || |||
Sbjct 128692 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 128751
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | |||||||||||||| ||| || || | || || || | || |||
Sbjct 128752 TCTTGTATTTTTGCCTTGACATTATCGATCGTATCTGAACTTTCTACCTCCAATGTAATG 128811
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || | ||| |||||||||||||||||
Sbjct 128812 GTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 128846
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| ||||| || | |||| || | || |||||||| || | ||| ||||| |
Sbjct 128848 CCTCCCCTCAAACGAAGGACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 128907
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || ||||| ||||| |||| || || ||||||||||| || |||
Sbjct 128908 AAGGTACGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGA 128967
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || || || | || || ||||| || | | | ||||| | | || ||
Sbjct 128968 ATTCCCTCCTTATCCTGTATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACC 129027
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || |||||||||||||| || ||||||||
Sbjct 129028 TCCAAAGTTATTGTCTTACCGGTAAGAGTTTTCACGAAAATCTGCAT 129074
>seq933
Length=173040
Score = 132 bits (146), Expect = 4e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854
||| ||||||||||||||||||||||| || | |||||||| || ||| |||
Sbjct 30137 CAAAACCAAGTGCAAAGTAGATTCCTTCTGGATATTATAATCAGCCAGAGTACGACCATC 30078
Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914
|||| ||| || ||| |||| |||| || ||||| |||||||||||||| ||||| ||
Sbjct 30077 TTCCAACTGCTTCCCGGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTATC 30018
Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974
| |||||||||||| || | | | || || | || || || | || |||||
Sbjct 30017 CTGAATTTTTGCCTTCACATTGTCAATTGTATCGGAACTCTCAACCTCCAATGTTATGGT 29958
Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||||| || || ||||| || |||||
Sbjct 29957 CTTTCCAGTAAGGGTCTTAACAAAAATTTGCAT 29925
Score = 120 bits (132), Expect = 3e-22
Identities = 174/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||| |||||||||| | |||||| || | ||||||||||| || |
Sbjct 29480 AAAAATCTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGAT 29421
Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
||| ||||| ||| | || | |||||| || || || || ||||||| | || |
Sbjct 29420 GTTGTAATCAGCT-AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCT 29362
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
||||||| ||||| || || |||||||| | || || |||||||| | | || |
Sbjct 29361 GCTGATCAGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTAT 29302
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | | || || |||| ||||||||||||||||| | || || || || |||||||
Sbjct 29301 CGGAGGATTCAACCTCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCA 29242
Query 95007 TGC 95009
|||
Sbjct 29241 TGC 29239
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || || || |||| ||| | ||| | || || |||||||| | ||| |||||
Sbjct 29239 CCGCCCCTTAACCGCAGCACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGCA 29180
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| ||||| || ||||||| | |||||||||||||| |||
Sbjct 29179 AGGGTGCGGCCATCTTCCAATTGTTTACCAGCAAAGATAAGCCTTTGCTGATCTGGTGGA 29120
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || || || || ||| | | | || |||| || ||
Sbjct 29119 ATCCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCCACC 29060
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||||||||| ||||| | |||||||| || || |||||
Sbjct 29059 TCAAGGGTGATGGTTTTGCCAGTCAATGTTTTCACGAAAATTTGCAT 29013
Score = 104 bits (114), Expect = 2e-17
Identities = 169/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||| |||||||||| | |||||| || | ||||||||||| || |
Sbjct 29708 AAAAATTTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGAT 29649
Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
||| ||||| ||| | || | |||||| || || || || ||||||| | || |
Sbjct 29648 GTTGTAATCAGCT-AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCT 29590
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
||||||| ||||| |||||||| || || | ||| || || || || | | ||| |
Sbjct 29589 GCTGATCGGGAGGGATACCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTAT 29530
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | || || || | || || || || || || | ||| |||||||| |||||||
Sbjct 29529 CTGAACTCTCAACCTCTAAAGTAATAGTCTTCCCTGTTAAAGTCTTCACAAAAATCTGCA 29470
Query 95007 T 95007
|
Sbjct 29469 T 29469
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850
||||| ||||| || | ||| ||||||||||| | ||||||||| || ||||| |
Sbjct 29911 CGCAAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATC-AGCA-AGTGTCCTAC 29854
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| || || || || || ||||||| | || |||||||| ||||| |||||||| |
Sbjct 29853 CATCTTCAAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGAGGGATACCTTCCT 29794
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
| || | ||| || || || || | | ||| || | || || || | ||||
Sbjct 29793 TATCCTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTGA 29734
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || ||||| || | ||| |||||||| || |||||
Sbjct 29733 TAGTCTTTCCTGTCAAAGTCTTCACAAAAATTTGCAT 29697
>seq1436
Length=88924
Score = 125 bits (138), Expect = 6e-24
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||| || | ||| | | ||||| || | ||||| || || || |
Sbjct 7025 AAAAATCTGCATTCCACCACGCAACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGAT 7084
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||||| | ||| | ||| |||| || || || ||||||| |||| ||
Sbjct 7085 ATTATAATCCGCAAGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTG 7144
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||| |||||||| |||||||| || | ||| || ||||| ||| | ||| |||||
Sbjct 7145 CTGATCAGGAGGAATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTC 7204
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || | ||||||||||||||||| || ||||| || ||||| |||||
Sbjct 7205 AGAGGATTCAACTTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACGAAGATTTGCAT 7264
Query 95008 GC 95009
||
Sbjct 7265 GC 7266
Score = 122 bits (134), Expect = 8e-23
Identities = 172/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||||| | ||| || | ||| || || | || || || || || |
Sbjct 38752 AAAAATCTGCATCCCTCCACGCAACCGAAGCACTAAATGAAGCGTGGACTCTTTCTGGAT 38811
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||||| | ||| | ||| |||| || || || ||||||| |||| ||
Sbjct 38812 ATTATAATCCGCAAGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTG 38871
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||| ||||| || |||||||| || | ||| || ||||| ||| | ||| |||||
Sbjct 38872 CTGATCAGGAGGGATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTC 38931
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | ||||||||||||||||| || ||||| |||||||| |||||
Sbjct 38932 GGAGGATTCAACTTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACAAAGATTTGCAT 38991
Query 95008 GC 95009
||
Sbjct 38992 GC 38993
Score = 118 bits (130), Expect = 1e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| ||||| ||||| | ||| |||||| | |||| | || || || |||||||||
Sbjct 7296 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCCGTCTTCAAGTTGTTTTCCG 7355
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| | | ||||| || || ||||| ||||| ||||| | ||||| || |||
Sbjct 7356 GCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTG 7415
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||||| | || || || | || |||||||| || || || |||
Sbjct 7416 ACGTTGTCGATGGTGTCAGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGTT 7475
Query 94991 TTCACAAAGATCTGCATG 95008
||||||||||||||||||
Sbjct 7476 TTCACAAAGATCTGCATG 7493
Score = 102 bits (112), Expect = 7e-17
Identities = 142/198 (72%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| ||||| ||||| | ||| |||||| | ||| | || || || |||||||||
Sbjct 39023 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCGTCTTCGAGTTGTTTTCCG 39082
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| | | || || ||||| ||||| ||||| ||||| | ||||| || |||
Sbjct 39083 GCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTG 39142
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||| | | || || || | || |||||||| || ||| | |||
Sbjct 39143 ACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTAGG-GTT 39201
Query 94991 TTCACAAAGATCTGCATG 95008
||||| ||||||||||||
Sbjct 39202 TTCACGAAGATCTGCATG 39219
>seq23
Length=202804
Score = 125 bits (138), Expect = 6e-24
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|||||||| || || | |||||||| | ||| | |||||| |||||||| ||
Sbjct 5684 GTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCCATCCTCAAGCTGTTTACCA 5625
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
||||||| |||| ||||||||| || ||||| ||||| || || | ||| || |||||
Sbjct 5624 GCAAAGATCAATCGTTGCTGATCAGGTGGAATCCCTTCCTTATCTTGAATCTTCGCCTTC 5565
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||| | ||||| || | |||||||||||||| || || |||
Sbjct 5564 ACGTTGTCGATTGTGTCTGATGATTCGACTTCGAGTGTGATGGTTTTTCCGGTTAGGGTT 5505
Query 94991 TTCACAAAGATCTGCATGC 95009
|| || ||||| |||||||
Sbjct 5504 TTGACGAAGATTTGCATGC 5486
>seq322
Length=397916
Score = 120 bits (132), Expect = 3e-22
Identities = 174/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||| |||||||||| | |||||| || | ||||||||||| || |
Sbjct 312518 AAAAATCTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGAT 312577
Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
||| ||||| ||| | || | |||||| || || || || ||||||| | || |
Sbjct 312578 GTTGTAATCAGCT-AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCT 312636
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
||||||| ||||| || || |||||||| | || || |||||||| | | || |
Sbjct 312637 GCTGATCAGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTAT 312696
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | | || || |||| ||||||||||||||||| | || || || || |||||||
Sbjct 312697 CGGAGGATTCAACCTCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCA 312756
Query 95007 TGC 95009
|||
Sbjct 312757 TGC 312759
Score = 116 bits (128), Expect = 3e-21
Identities = 172/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||| |||||||||| | |||||| || | ||||||||||| || |
Sbjct 312290 AAAAATTTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGTAT 312349
Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
||| ||||| ||| | || | |||||| || ||||| || ||||||| | || |
Sbjct 312350 GTTGTAATCTGCT-AGGGTTCTTCCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCT 312408
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
||||||||||||| || ||||| || || | ||| || || || || ||| ||| |
Sbjct 312409 GCTGATCTGGAGGGATTCCTTCCTTATCCTGAATCTTAGCTTTCACATTATCGATAGTAT 312468
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | || || || | || || || ||||| || | ||| |||||||| |||||||
Sbjct 312469 CTGAACTCTCAACCTCTAAAGTAATAGTCTTTCCTGTTAAAGTCTTCACAAAAATCTGCA 312528
Query 95007 T 95007
|
Sbjct 312529 T 312529
Score = 113 bits (124), Expect = 4e-20
Identities = 171/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || ||| |||||||||| | ||||| || | ||||||||||| || |
Sbjct 312062 AAAAATTTGCATTCCACCTCTCAATCTAAGTACCAAATGAAGGGTAGATTCCTTCTGTAT 312121
Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
||| ||||| ||| | || | |||||| |||||||| || ||||||| | || |
Sbjct 312122 GTTGTAATCAGCT-AGGGTTCTTCCATCCTCAAGCTGTTTCCCTGCAAAGATAAGCCTCT 312180
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
||||||||||||| || || ||||| || | ||| || || || || ||| ||| |
Sbjct 312181 GCTGATCTGGAGGGATTCCCTCTTTATCCTGAATCTTAGCTTTCACATTATCGATAGTAT 312240
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | || || || | || || |||||||| || | ||| || ||||| || ||||
Sbjct 312241 CTGAACTCTCAACCTCCAAAGTAATAGTTTTTCCTGTCAAAGTCTTAACAAAAATTTGCA 312300
Query 95007 T 95007
|
Sbjct 312301 T 312301
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854
||| |||| ||| | |||||||||||| || | |||||||| || ||| |||
Sbjct 333197 CAAAACCAGGTGGAGAGTAGATTCCTTCTGGATATTATAATCAGCCAGAGTACAACCATC 333256
Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914
|||| ||| || ||| |||| |||| || ||||| || |||||||||| ||||| ||
Sbjct 333257 TTCCAACTGCTTGCCGGCAAAAATTAGCCTCTGCTGGTCCAGAGGAATACCCTCTTTATC 333316
Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974
| ||||||||| || || | | | ||| || || || || | || |||||
Sbjct 333317 CTGAATTTTTGCTTTCACATTGTCAATAGTATCGAAACTCTCAACCTCCAAAGTTATGGT 333376
Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||||||||| || || ||||| || |||||
Sbjct 333377 CTTTCCAGTAAGGGTCTTAACAAAAATTTGCAT 333409
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| |||| ||| || ||| |||| |||| || ||||| |||||||||||||| |||||
Sbjct 311690 ATCTTCCAACTGCTTCCCGGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATACCCTCTTT 311749
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | ||| ||||| || || | | | |||||| | || || || | || ||
Sbjct 311750 ATCTTGAATCTTTGCTTTCACATTGTCAATAGTGTCGGAACTCTCAACCTCCAAAGTTAT 311809
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| ||||||||||| || || ||||| || |||||
Sbjct 311810 GGTCTTTCCAGTAAGGGTCTTAACAAAAATTTGCAT 311845
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || || || |||| ||| | ||| | || || |||||||| | ||| |||||
Sbjct 312759 CCGCCCCTTAACCGCAGCACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGCA 312818
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || | ||||| ||| ||||||| | ||||||||||| || |||
Sbjct 312819 AGGGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATAAGCCTTTGCTGATCAGGTGGA 312878
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || || || || || | | | || |||| || ||
Sbjct 312879 ATCCCTTCCTTGTCTTGGATCTTAGCTTTAACATTGTCTATGGTATCAGAAATCTCCACC 312938
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||||||||| || || | |||||||| || || |||||
Sbjct 312939 TCAAGGGTGATGGTTTTACCGGTCAATGTTTTCACGAAAATTTGCAT 312985
Score = 95.1 bits (104), Expect = 1e-14
Identities = 167/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||| |||||||||| | ||||| || | ||||||||||| || |
Sbjct 333627 AAAAATCTGCATTCCACCTCTCAATCTAAGAACCAAATGAAGGGTAGATTCCTTCTGGAT 333686
Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
||| ||||| ||| | || | |||||| || || || || ||||||| | | |
Sbjct 333687 GTTGTAATCAGCT-AGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCACT 333745
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
||||||| ||||| || || |||||||| | || || |||||||| | | || |
Sbjct 333746 GCTGATCAGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTAT 333805
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | | || || |||| ||||| |||| ||||| | || || || || |||||||
Sbjct 333806 CTGAGGATTCAACCTCAAGGGTGATAATTTTGCCAGTCAAGGTCTTAACGAATATCTGCA 333865
Query 95007 T 95007
|
Sbjct 333866 T 333866
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| || |||||||| | ||| | || || |||||||| | ||| |||||
Sbjct 333868 CCACCTCTTAACCGCAACACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCTGCA 333927
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || | ||||| ||| | ||||| | ||||||||||| || |||
Sbjct 333928 AGGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGCCTTTGCTGATCAGGTGGA 333987
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || || || || ||| | | | || |||| || |
Sbjct 333988 ATCCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCCGCC 334047
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| ||||||||||| || | | |||||||| || || |||||
Sbjct 334048 TCAAGGGTGATGGTTTTACCCATCAATGTTTTCACGAAAATTTGCAT 334094
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| ||||| || | ||| ||||||||||| | ||||||||| | || | |
Sbjct 311859 CGCAAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTTCTTCCA 311918
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || || || ||||||| | || |||||||||||||| ||||| || ||
Sbjct 311919 TCCTCAAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGAGGGATACCCTCCTTA 311978
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||| || || || || | | ||| || | || || || | || ||
Sbjct 311979 TCCTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCTAAAGTAATA 312038
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||||| || | ||| || ||||| || |||||
Sbjct 312039 GTTTTTCCTGTCAAAGTCTTAACAAAAATTTGCAT 312073
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/216 (69%), Gaps = 1/216 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| ||||| || | ||| ||||||||||| | ||||||||| | || | |
Sbjct 333423 CGCAAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTTCTTCCA 333482
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || ||||| || ||||||| | || ||||||||||| || || || || ||
Sbjct 333483 TCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGGGGGATTCCCTCCTTA 333542
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGT-GAT 94971
|| | ||| || || || || ||| ||| || | || || || | || ||
Sbjct 333543 TCCTGAATCTTAGCTTTCACATTATCGATAGTATCTGAACTCTCAACCTCTAAAGTAAAT 333602
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || | ||| || ||||| ||||||||
Sbjct 333603 AGTCTTTCCTGTTAAAGTCTTGACAAAAATCTGCAT 333638
>seq1740
Length=56962
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGG 94850
|||||| || | || | || ||||| || || | ||| ||||| ||| | || ||
Sbjct 21880 TCGCAAGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCTAAG-GTCCTGC 21822
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| || ||||| ||||| |||| || || |||||||| ||||| || || || ||||
Sbjct 21821 CATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTT 21762
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | ||| || |||||||| | | | ||||| | | || || |||| ||||
Sbjct 21761 TGTCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCCACCTCAAGGGTGA 21702
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| |||||||| || || || ||||||||||||||
Sbjct 21701 TGGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 21665
Score = 116 bits (128), Expect = 3e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869
|| |||||||| || | ||| ||||| ||| || || || ||| || |||||||||||
Sbjct 43590 GTGGATTCCTTCTGGATGTTGTAATCAGCTAAT-GTCCTGCCATCTTCAAGCTGTTTTCC 43648
Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929
|||| |||| ||||| || ||||| ||||||||||| ||||| | ||| || ||||
Sbjct 43649 AGCAAAAATTAGCCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGACCTT 43708
Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989
||| | | || || | || || |||| |||| ||| |||||||| |||||
Sbjct 43709 GACATTATCTATGGTATCCGAACTCTCTACCTCAAGGGTGACGGTCTTTCCAGTGAGAGT 43768
Query 94990 TTTCACAAAGATCTGCAT 95007
||||||||||| |||||
Sbjct 43769 CTTCACAAAGATTTGCAT 43786
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||||||| | ||| | ||| || ||||| || | ||| || || | ||| | |
Sbjct 22563 CGCAACACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCA 22504
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| || || || ||||||| || || ||||||||||| || || ||||| |||
Sbjct 22503 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTG 22444
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | |||||||||||||| | | ||||| | || || || | ||||||
Sbjct 22443 TCCTGTATTTTTGCCTTGACATTATCAATTGTGTCTGAACTTTCTACTTCCAAGGTGATG 22384
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || | || |||||||||||||||||
Sbjct 22383 GTCTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 22349
Score = 109 bits (120), Expect = 5e-19
Identities = 165/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || ||||| |||| || | || | ||| | || | || || || | |||||
Sbjct 42307 TTTGCATACCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGAACTCTTTCTGAATGTTAT 42366
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
|||| || ||| | ||| |||||||| ||||| |||| || || |||||||| |
Sbjct 42367 AATCAGCCAAAGTCCGGCCATCTTCCAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGT 42426
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
|||| || |||||||||||||| | || || | ||| || | | | |||||| | |
Sbjct 42427 CTGGGGGGATACCTTCTTTGTCCTGTATCTTGGTCTTCACATTGTCAATAGTGTCTGAGC 42486
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | || || || ||||| |||||||| ||||| || ||||||||
Sbjct 42487 TCTCTACCTCCAAGGTAATAGTCTTTCCGGTAAGAGTCTTCACGAAAATCTGCAT 42541
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | ||| | ||| || || || || | ||||||||| | ||| || |
Sbjct 42555 CGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCATCAAGAGTTCTGCCA 42614
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || ||||| ||||| |||| || | || ||||| |||||||| ||||| ||||||
Sbjct 42615 TCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGAGGGATACCCTCTTTG 42674
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| | | | | ||||| | | || || ||||| || |||
Sbjct 42675 TCCTGTATCTTAGCCTTCAGATTGTCAATTGTGTCTGAGCTCTCCACCTCAATAGTAATG 42734
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
||||| || || | || ||||||||||| |||||||
Sbjct 42735 GTTTTACCTGTCAATGTCTTCACAAAGATTTGCATGC 42771
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
||||| || | || | |||||| ||||| || | ||| || || | ||| | |
Sbjct 42099 CGCAAAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCA 42158
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||| || || || ||||||| || || ||||||||||| || || || || |||
Sbjct 42159 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 42218
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||| |||||||| | | ||||| | || || || | || |||
Sbjct 42219 TCCTGTATTTTGGCCTTGACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTAATG 42278
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| | || ||||||||||| |||||
Sbjct 42279 GTCTTTCCAGTCAAGGTCTTCACAAAGATTTGCAT 42313
Score = 86.0 bits (94), Expect = 6e-12
Identities = 160/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || ||||| ||||| || | || | || | ||||||||||| || | ||| |
Sbjct 42763 TTTGCATGCCTCCCCTCAAACGAAGGACAAGATGAAGGGTAGATTCCTTCTGGATGTTGT 42822
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
|||| || || | ||| || ||||| ||||| |||| || || |||||||| |
Sbjct 42823 AATCAGCCAATGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGT 42882
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| |||||||| || || ||||| | || || || || || | | | ||||| |
Sbjct 42883 CCGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATCGTGTCTGAAC 42942
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | || |||||||| || || | || || ||||| ||||||||
Sbjct 42943 TCTCAACCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTTACAAAAATCTGCAT 42997
>seq37
Length=1182629
Score = 118 bits (130), Expect = 1e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| ||| |||||| | ||||| | | ||||||||| |||||||| ||||| |||
Sbjct 292975 TCTTCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGATCCGGAGGAATTCCTTCCTTG 293034
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || || |||||| | ||| ||||||| | || || |||| ||||||
Sbjct 293035 TCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATG 293094
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || ||||||||||| ||||| |||||
Sbjct 293095 GTCTTTCCGGTGAGAGTTTTCACGAAGATTTGCAT 293129
Score = 100 bits (110), Expect = 3e-16
Identities = 171/243 (70%), Gaps = 5/243 (2%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || || ||||| |||| ||| | || | ||||| ||||| || |
Sbjct 291928 AAAAATCTGCATACCACCCCTCAAACGCAGCACAAGATGAAGGGTAGACTCCTTCTGGAT 291987
Query 94828 GTTATAATCGCTCATAGTGT--TGGAATCCTCCAGCTGTTT-TCCGCCAAAGATTAATCT 94884
|| ||||| | || || || | ||| |||| |||||| ||| ||||||| || ||
Sbjct 291988 ATTGTAATC-CGCA-AGGGTCCTTCCATCTTCCAACTGTTTATCCAGCAAAGATCAACCT 292045
Query 94885 TTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGT 94944
||||||||||| |||||||| || || || | || || |||||||| | | | ||
Sbjct 292046 CTGCTGATCTGGGGGAATACCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCAATGGT 292105
Query 94945 GTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004
||| | | || || || | || ||||| ||||| || | ||| |||||||| || ||
Sbjct 292106 GTCTGAGCTTTCCACCTCCAAGGTTATGGTCTTTCCGGTCAAAGTCTTCACAAATATTTG 292165
Query 95005 CAT 95007
|||
Sbjct 292166 CAT 292168
>seq276
Length=436033
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| |||||||| || | || || ||| | |||| | || || |||||
Sbjct 192458 GTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTG 192399
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
||||||| | ||||| | || ||| ||||| || ||||| ||||| ||||| | |||||
Sbjct 192398 TTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTT 192339
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||||||||| | ||| || |||| || || || | || || || || || ||
Sbjct 192338 GGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGT 192279
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || |||||||||||
Sbjct 192278 GAGGGTTTTGACGAAGATCTGCAT 192255
>seq78
Length=963227
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| |||||||| || | || || ||| | |||| | || || |||||
Sbjct 597694 GTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTG 597753
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
||||||| | ||||| | || ||| ||||| || ||||| ||||| ||||| | |||||
Sbjct 597754 TTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTT 597813
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||||||||| | ||| || |||| || || || | || || || || || ||
Sbjct 597814 GGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGT 597873
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || |||||||||||
Sbjct 597874 TAGGGTTTTGACGAAGATCTGCAT 597897
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| |||||||| || | ||| || ||| | |||| | ||| || | |||
Sbjct 604655 GTGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCTTCTAACTG 604714
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|||||| | ||||| | | |||||| || || ||||| ||||| ||||| | || ||
Sbjct 604715 CTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTT 604774
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
|| ||||| | ||| ||||||| || || || | || || || || || ||
Sbjct 604775 GGCTTTGACATTGTCGATTGTGTCAGAAGACTCAACCTCGAGGGTTATCGTCTTCCCTGT 604834
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| |||||||| |||||||||||
Sbjct 604835 TAGGGTTTTCACGAAGATCTGCAT 604858
>seq426
Length=522792
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863
||| | ||| |||||||| || | || || ||| | |||| | || || |||||
Sbjct 162615 GTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTG 162674
Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923
|||||| | ||||| | || ||| ||||| || ||||| ||||| ||||| | |||||
Sbjct 162675 TTTTCCTGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTT 162734
Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983
||||||||| | ||| || |||| || || || | || || || || || ||
Sbjct 162735 GGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGT 162794
Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || |||||||||||
Sbjct 162795 TAGGGTTTTGACGAAGATCTGCAT 162818
>seq319
Length=603634
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || ||||||||||| | ||||||||| | |||| | ||| |||
Sbjct 440706 ACCAAGTGAAGTGTTGATTCCTTTTGTATGTTATAATCAGCAAGAGTGCGGCCATCTTCC 440765
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || |||| || || || ||||| || ||||| |||||||| ||||| ||
Sbjct 440766 AGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCGGGAGGGATACCTTCCTTGTCCTA 440824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448137525776640
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |