Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1436 122 7e-23 seq933 122 7e-23 seq322 122 7e-23 seq23 107 2e-18 seq1642 96.9 3e-15 seq1039 89.7 4e-13 seq1740 87.8 2e-12 >seq1436 Length=88924 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| ||||||||||| | || || ||||||| || || | Sbjct 38991 ATGCAAATCTTTGTCAAAACCCTAACTGGAAAAACCATCACACTCGAAGTTGAATCCTCC 38932 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| || |||||||| || ||||| ||||| Sbjct 38931 GACACAATCGACAACGTGAAGGCGAAGATTCAGGATAAAGAAGGAATCCCTCCTGATCAG 38872 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || |||||| | ||||||| |||| | |||||||| Sbjct 38871 CAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGAACTCTTGCGGATTATAAT 38812 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || ||||| || || ||||||||||| | | ||| | ||||| Sbjct 38811 ATCCAGAAAGAGTCCACGCTTCATTTAGTGCTTCGGTTGCGTGGAGG 38765 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| ||||||||||| | || || ||||||| || || Sbjct 7264 ATGCAAATCTTCGTCAAAACCCTAACTGGAAAAACCATCACACTCGAAGTTGAATCCTCT 7205 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| || |||||||| || ||||| ||||| Sbjct 7204 GACACAATCGACAACGTGAAGGCGAAGATTCAGGATAAAGAAGGAATTCCTCCTGATCAG 7145 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | || |||||| | ||||||| |||| | |||||||| Sbjct 7144 CAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGAACTCTTGCGGATTATAAT 7085 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || ||||| ||||| ||||||| || | || ||| | || ||| Sbjct 7084 ATCCAGAAAGAGTCTACGCTTCATTTGGTTCTTAGGTTGCGTGGTGGA 7037 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| || | | |||| | || ||| | || || || || | Sbjct 39218 ATGCAGATCTTCGTGAAAACCCTACCGGCAAAACC-ATAACCCTAGAGGTAGAATCCTCC 39160 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| || || ||||| ||||| || || || || ||| Sbjct 39159 GACACCATCGACAACGTCAAAGCCAAAATCCAAGACAAGGAAGGAATTCCACCAGACCAA 39100 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||| || ||||||||||| | | ||| | |||||| ||| Sbjct 39099 CAGCGTCTCATCTTCGCCGGAAAACAACTCGAAGACGGCCGAACTCTTGCCGATTACAAC 39040 Query 24171 ATTCAAAAAGAATCTACA 24188 || ||||||||||| ||| Sbjct 39039 ATCCAAAAAGAATCCACA 39022 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| |||| || ||| | || ||| | || || || || Sbjct 7492 ATGCAGATCTTTGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCCTCT 7433 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| || || ||||| ||||| || || || || || Sbjct 7432 GACACCATCGACAACGTCAAAGCCAAAATCCAAGACAAGGAAGGAATTCCACCTGACCAG 7373 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||| || ||||| ||||| | | | | | |||||| ||| Sbjct 7372 CAGCGTCTCATCTTCGCCGGAAAACAACTTGAAGACGGCCGCACTCTTGCCGATTACAAC 7313 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || ||||||||||| ||| | ||| Sbjct 7312 ATCCAAAAAGAATCCACACTCCAT 7289 >seq933 Length=173040 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||||||| | || ||| | || || || || | Sbjct 29241 ATGCAGATATTCGTTAAGACCTTGACTGGAAAAACCATCACCCTTGAGGTTGAATCCTCC 29300 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| ||||| |||||||| ||||| ||||| ||||| Sbjct 29301 GATACAATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGATCAG 29360 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | | || |||||||| || |||| |||| | | ||| ||||| || Sbjct 29361 CAGAGGCTTATCTTTGCAGGGAAGCAACTTGAGGATGGAAGAACCCT-AGCTGATTACAA 29419 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || || |||||||| ||||||| ||| | ||||||||||| ||| Sbjct 29420 CATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGA 29468 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || ||||| || || | ||||| | || || ||| Sbjct 29468 AATGCAGATTTTTGTGAAGACTTTAACAGGGAAGACTATTACTTTAGAGGTTGAGAGTTC 29527 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || ||| |||||| || || ||||| || ||||||||||| Sbjct 29528 AGATACTATTGATAATGTGAAAGCCAAGATTCAGGATAAGGAAGGTATCCCTCCCGATCA 29587 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 ||||| || || | | || |||||||| || |||| |||| | | ||| ||||| | Sbjct 29588 GCAGAGGCTTATCTTTGCAGGGAAGCAACTTGAGGATGGAAGAACCCT-AGCTGATTACA 29646 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||| || || |||||||| ||||||| ||| | ||||||||||| ||| Sbjct 29647 ACATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGA 29696 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || || || ||||| | || || | || || ||| Sbjct 29696 AATGCAAATTTTTGTGAAGACTTTGACAGGAAAGACTATCACTTTGGAGGTTGAGAGTTC 29755 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || ||| |||||| || || ||||| || ||||||||||| Sbjct 29756 AGATACTATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATCCCTCCCGATCA 29815 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACA-GAAACGTCAGC-GATTAT 24167 ||||| || || | | || |||||||| ||||||| | || || | || |||||| Sbjct 29816 GCAGAGGCTTATCTTTGCTGGTAAGCAACTTGAAGATGGTAGGACACTT--GCTGATTAT 29873 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| ||||| ||||| || | ||||| || || Sbjct 29874 AACATCCAAAAGGAATCCACTCTCCATTTGGTTTT 29908 >seq322 Length=397916 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||||||| | || ||| | || || || || | Sbjct 312757 ATGCAGATATTCGTTAAGACCTTGACTGGAAAAACCATCACCCTTGAGGTTGAATCCTCC 312698 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| ||||| |||||||| ||||| ||||| ||||| Sbjct 312697 GATACAATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGATCAG 312638 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | | || |||||||| || |||| |||| | | ||| ||||| || Sbjct 312637 CAGAGGCTTATCTTTGCAGGGAAGCAACTTGAGGATGGAAGAACCCT-AGCTGATTACAA 312579 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || || |||||||| ||||||| ||| | ||||||||||| ||| Sbjct 312578 CATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGA 312530 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || ||||| ||||| | ||||| | || || ||| Sbjct 312530 AATGCAGATTTTTGTGAAGACTTTAACAGGAAAGACTATTACTTTAGAGGTTGAGAGTTC 312471 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || ||||| | || ||| |||||| || || ||||| || ||||| ||||| Sbjct 312470 AGATACTATCGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGAATCCCTCCAGATCA 312411 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 ||||| || || | | || || ||||| || |||| |||| | | ||| ||||| | Sbjct 312410 GCAGAGGCTTATCTTTGCAGGGAAACAACTTGAGGATGGAAGAACCCT-AGCAGATTACA 312352 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||| || || |||||||| ||||||| ||| | ||||||||||| ||| Sbjct 312351 ACATACAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGA 312302 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || || || |||||| | ||||| | || || ||| Sbjct 312302 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAAACTATTACTTTGGAGGTTGAGAGTTC 312243 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || ||||| | || ||| |||||| || ||||| || || ||||| ||||| Sbjct 312242 AGATACTATCGATAATGTGAAAGCTAAGATTCAGGATAAAGAGGGAATCCCTCCAGATCA 312183 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 ||||| || || | | || || || || || |||| |||| | | ||| ||||| | Sbjct 312182 GCAGAGGCTTATCTTTGCAGGGAAACAGCTTGAGGATGGAAGAACCCT-AGCTGATTACA 312124 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||| || || |||||||| ||||||| || | ||||||||||| ||| Sbjct 312123 ACATACAGAAGGAATCTACCCTTCATTTGGTACTTAGATTGAGAGGTGGA 312074 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| ||| || ||| | || || || || Sbjct 333866 ATGCAGATATTCGTTAAGACCTTGACTGGCAAAATTATCACCCTTGAGGTTGAATCCTCA 333807 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| ||||| |||||||| ||||| ||||| ||||| Sbjct 333806 GATACAATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCTGATCAG 333747 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||| | || || | | || |||||||| || |||| |||| | | ||| ||||| || Sbjct 333746 CAGTGGCTTATCTTTGCAGGGAAGCAACTTGAGGATGGAAGAACCCT-AGCTGATTACAA 333688 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || || |||||||| ||||||| || | ||||||||||| ||| Sbjct 333687 CATCCAGAAGGAATCTACCCTTCATTTGGTTCTTAGATTGAGAGGTGGA 333639 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || || || |||||| | ||||| | || || ||| Sbjct 312074 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAAACTATTACTTTAGAGGTTGAGAGTTC 312015 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || ||| |||||| || || || || || ||||| ||||| Sbjct 312014 AGATACTATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAGGGTATCCCTCCAGATCA 311955 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| || || | | || |||||||| || |||| |||| | | |||||||| Sbjct 311954 GCAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGATGGAAGAACCCTTGCTGATTATAA 311895 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||| ||||| ||||| || | ||||| || || Sbjct 311894 CATCCAAAAGGAATCCACTCTCCATTTGGTTTT 311862 >seq23 Length=202804 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| || ||| | || ||| | || || || || | Sbjct 5260 ATGCAAATCTTCGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCCTCC 5319 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| || ||| ||||| ||||| || || || |||||| Sbjct 5320 GACACCATCGACAACGTCAAAGCCAAAATTCAAGACAAGGAAGGAATTCCACCAGATCAA 5379 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | || ||| || ||||||||||||| | | | | |||||| ||| Sbjct 5380 CAACGTCTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGTACTCTTGCCGATTACAAC 5439 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||||||||| || Sbjct 5440 ATCCAAAAAGAATCCAC 5456 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| |||||| | || || |||||||||| | Sbjct 5488 ATGCAAATCTTCGTCAAAACCCTAACCGGAAAAACCATCACACTCGAAGTCGAATCATCA 5547 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| || || ||||| || || || ||||| Sbjct 5548 GACACAATCGACAACGTGAAGGCGAAGATTCAAGATAAGGAAGGGATTCCACCTGATCAG 5607 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | | || || || || || |||| || | | |||||||| Sbjct 5608 CAACGATTGATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTTGCTGATTATAAT 5667 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 ||||| |||||||||||| ||||| Sbjct 5668 ATTCAGAAAGAATCTACACTTCAT 5691 >seq1642 Length=65368 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | |||||||| | || ||| | || || ||| Sbjct 54162 ATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 54221 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| || |||||||| || || || ||||| Sbjct 54222 GACACCATAGACAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAG 54281 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| | |||| | || ||||| |||||||||| ||||| | | ||||||||| Sbjct 54282 CAGAGGTTAATTTTTGCAGGAAAGCAGCTCGAAGATGGCAGAACCCTGGCTGATTATAAC 54341 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || ||||| ||||| |||| Sbjct 54342 ATCCAGAAAGAGTCTACCCTTCA 54364 >seq1039 Length=240209 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | |||||||| | || ||| | || || ||| Sbjct 129302 ATGCAGATCTTTGTTAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTAGAGAGTTCT 129243 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| || |||||||| || || || ||||| Sbjct 129242 GACACCATAGACAATGTCAAGGCCAAGATACAAGATAAAGAAGGTATTCCCCCAGATCAG 129183 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| | || || || |||||||||| ||||| | | ||||||||| Sbjct 129182 CAGAGGTTGATTTTTGCGGGAAAACAGCTCGAAGATGGCAGAACCCTGGCTGATTATAAC 129123 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || ||||| || || |||| | ||||| Sbjct 129122 ATCCAGAAAGAGTCAACTCTTCACCTTGTGTT 129091 >seq1740 Length=56962 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || ||||| || || ||| | ||||| || || || ||| | Sbjct 42769 ATGCAAATCTTTGTGAAGACATTGACAGGTAAAACCATTACTATTGAGGTGGAGAGCTCA 42710 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | | || ||||| |||||||| || || ||||| || || Sbjct 42709 GACACAATTGACAATCTGAAGGCTAAGATACAGGACAAAGAGGGTATCCCTCCAGACCAG 42650 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | || ||||| || ||||||| ||||| | ||||||||| Sbjct 42649 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGAACTCTTGATGATTATAAC 42590 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || ||||| || || |||| Sbjct 42589 ATCCAGAAAGAGTCAACTCTTCA 42567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429792302490720