Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq322 152 4e-32 seq1436 140 3e-28 seq23 136 3e-27 seq933 127 2e-24 seq1642 123 2e-23 seq1039 109 5e-19 seq1740 107 2e-18 seq78 107 2e-18 seq37 95.1 1e-14 seq46 91.5 1e-13 >seq322 Length=397916 Score = 152 bits (168), Expect = 4e-32 Identities = 178/236 (75%), Gaps = 7/236 (3%) Strand=Plus/Minus Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 ||||| |||||||| || || || || |||||||||||| ||||||| | || |||||| Sbjct 312991 GAACAGATGCAAATTTTCGTGAAAACATTGACCGGTAAAACCATCACCCTTGAGGTGGAG 312932 Query 25053 TCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109 ||||| || || || || || |||| || | || ||||| |||||||||||| Sbjct 312931 ATTTCTGATACCATAGA--CAATGTTAAAGCTAAGATCCAA-GACAAGGAAGGGATTCCA 312875 Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169 ||||| || || || |||| |||||||| |||||||||||||||| ||||| | | Sbjct 312874 CCTGATCAGCAAAGGCTTATCTTTGCCGGTAAACAATTAGAAGATGGCCGCACCCTTGCG 312815 Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| || ||||| || ||||| || || | ||||| || |||| || || Sbjct 312814 GATTACAACATCCAAAAGGAGTCCACCCTTCACCTTGTGCTGCGGTTAAGGGGCGG 312759 Score = 132 bits (146), Expect = 4e-26 Identities = 172/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 ||||| |||||||| || || || || |||| |||||| ||||||| | || | |||| Sbjct 334100 GAACAGATGCAAATTTTCGTGAAAACATTGATGGGTAAAACCATCACCCTTGAGGCGGAG 334041 Query 25053 TCGTCTGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||||| || || || | | |||| || | || ||||| |||||||||||||| Sbjct 334040 AGTTCTGATACCATAGACAACGTTAAAGCTAAGATCCAA-GACAAGGAAGGGATTCCACC 333982 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||| || || || |||| || ||||| |||||||||||||||| ||||| | | || Sbjct 333981 TGATCAGCAAAGGCTTATCTTCGCCGGTAAACAATTAGAAGATGGCCGCACCCTTGCAGA 333922 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| || ||||| || ||||| || || | ||| | || ||||||| || Sbjct 333921 TTACAACATCCAAAAGGAGTCCACCCTTCACCTTGTGTTGCGGTTAAGAGGTGG 333868 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || |||| || | || || ||| | Sbjct 333409 ATGCAAATTTTTGTTAAGACCCTTACTGGAAAGACCATAACTTTGGAGGTTGAGAGTTTC 333350 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || || || ||||||||| ||| || ||||| || ||||| | ||| Sbjct 333349 GATACTATTGA--CAATGTGAAAGCAAAAATTCAG-GATAAAGAGGGTATTCCTCTGGAC 333293 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | |||||||||||||| || || ||||||| | | ||| ||| ||||| Sbjct 333292 CAGCAGAGGCTAATTTTTGCCGGCAAGCAGTTGGAAGATGGTTGTACTCTGGCTGATTAT 333233 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 ||||| || || ||||| || || || Sbjct 333232 AATATCCAGAAGGAATCTACTCTCCA 333207 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || ||| | || || | || || ||| || Sbjct 312302 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAAACTATTACTTTGGAGGTTGAGAGTTC 312243 Query 25058 TGACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || |||||||| || |||| || | ||| || ||||| || || || || || | Sbjct 312242 AGATACTATCGATAATGTGAAAGCTAAGATTCA-GGATAAAGAGGGAATCCCTCCAGATC 312184 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || |||| ||||| || ||||| | || |||| | || | | ||||||| Sbjct 312183 AGCAGAGGCTTATCTTTGCAGGGAAACAGCTTGAGGATGGAAGAACCCTAGCTGATTACA 312124 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 | || || || ||||| || || ||||| || || || | ||||| |||| Sbjct 312123 ACATACAGAAGGAATCTACCCTTCATTTGGTACTTAGATTGAGAGGTGGAA 312073 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/179 (73%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || |||| || | || || ||| || Sbjct 311845 ATGCAAATTTTTGTTAAGACCCTTACTGGAAAGACCATAACTTTGGAGGTTGAGAGTTCC 311786 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || ||||||| | ||| || ||||| || ||||| || ||| Sbjct 311785 GACACTATTGA--CAATGTGAAAGCAAAGATTCAA-GATAAAGAGGGTATTCCTCCAGAC 311729 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || | ||||||||||| || || || ||||||| ||| ||| ||| ||||| Sbjct 311728 CAGCAGAGGCTAATTTTTGCCGGGAAGCAGTTGGAAGATGGTCGTACTCTGGCTGATTA 311670 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || ||| | || || | || || ||| || Sbjct 312074 AATGCAAATTTTTGTTAAGACTTTGACAGGAAAAACTATTACTTTAGAGGTTGAGAGTTC 312015 Query 25058 TGACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || |||| || | ||| || || || || || || || || | Sbjct 312014 AGATACTATTGATAATGTGAAAGCTAAGATTCA-GGATAAGGAGGGTATCCCTCCAGATC 311956 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || |||| ||||| || || ||| | || |||| | || | | ||||| | Sbjct 311955 AGCAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGATGGAAGAACCCTTGCTGATTATA 311896 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || ||||| |||||||| || ||||| || Sbjct 311895 ACATCCAAAAGGAATCCACTCTCCATTTGGT 311865 >seq1436 Length=88924 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | ||||| ||| |||| || | || || || || ||| Sbjct 7492 ATGCAGATCTTTGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCCTCT 7433 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| |||| |||| || ||||| ||||| ||||||||||| Sbjct 7432 GACACCATCGACAACGTCA---AAGCCAAAATCCAA-GACAAGGAAGGAATTCCACCTGA 7377 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || || ||||| |||||| | ||||| | |||||| | | |||||| Sbjct 7376 CCAGCAGCGTCTCATCTTCGCCGGAAAACAACTTGAAGACGGCCGCACTCTTGCCGATTA 7317 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || |||||||||||||| || ||| | || || Sbjct 7316 CAACATCCAAAAAGAATCCACACTCCATCTCGTTCT 7281 Score = 138 bits (152), Expect = 1e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || ||| |||||||| ||||||| || || || Sbjct 38991 ATGCAAATCTTTGTCAAAACCCTAACTGGAAAAACCATCACACTCGAAGTTGAATCCTCC 38932 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| || |||||||| || || ||||| || Sbjct 38931 GACACAATCGACAACGTGAAGGCGAAGATTCAG-GATAAAGAAGGAATCCCTCCTGATCA 38873 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| || || ||||| ||||||| | ||| | | ||||| || Sbjct 38872 GCAGCGATTGATCTTTGCAGGGAAGCAATTGGAAGATGGGAGAACTCTTGCGGATTATAA 38813 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || ||||| |||||||| ||||||||||| Sbjct 38812 TATCCAGAAAGAGTCCACGCTTCATTTAGTGCT 38780 Score = 120 bits (132), Expect = 3e-22 Identities = 153/207 (74%), Gaps = 9/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | ||||| ||| |||| || | || || || || || Sbjct 39218 ATGCAGATCTTCGTGAAAACCCT-ACCGGCAAAACCATAACCCTAGAGGTAGAATCCTCC 39160 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| |||| |||| || ||||| ||||| |||||||| || Sbjct 39159 GACACCATCGACAACGTCA---AAGCCAAAATCCAA-GACAAGGAAGGAATTCCACCAGA 39104 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | || || ||||| |||||| | ||||| | || ||| | | |||||| Sbjct 39103 CCAACAGCGTCTCATCTTCGCCGGAAAACAACTCGAAGACGGCCGAACTCTTGCCGATTA 39044 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| || |||||||||||||| || || Sbjct 39043 CAACATCCAAAAAGAATCCACACTCCA 39017 Score = 118 bits (130), Expect = 9e-22 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| |||||||| || | || || | || || ||| || Sbjct 7037 AATGCAGATTTTTGTGAAGACGTTGACCGGGAAGACGATTACTCTTGAGGTTGAGAGTTC 6978 Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||| ||||| || | || ||||| | || | ||| ||||| || || ||||||||||| Sbjct 6977 TGATACTATTGA-TAACGTGAAGGCGAAGATTCAA-GACAAGGAGGGTATTCCACCTGAT 6920 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || |||||||| ||||| | || |||| || ||| | | ||||| Sbjct 6919 CAGCAGCGATTGATCTTTGCCGGTAAACAGCTTGAGGATGGACGGACTCTTGCTGATTAT 6860 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| |||||||| || || || | || || ||||| Sbjct 6859 AATATTCAGAAAGAATCTACACTCCACCTTGTTCTCAGGCT 6819 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || | || || | || |||||| ||| Sbjct 38763 ATGCAGATTTTTGTGAAGACGTTGACGGGGAAGACTATTACTCTTGAGGTGGAGAGTTCT 38704 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || ||||| | || | ||| || || || |||||||||||||| || Sbjct 38703 GATACTATTGATAATGTGAAGGCGAAGATTCAA-GATAAGGAGGGGATTCCACCTGATCA 38645 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || |||||||| ||||| | || |||| | ||| | | ||||| || Sbjct 38644 GCAGCGATTGATCTTTGCCGGTAAACAGCTTGAGGATGGAAGGACTCTTGCTGATTATAA 38585 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||| |||||||| || || || | || || ||||| Sbjct 38584 TATTCAGAAAGAATCTACTCTTCACCTTGTTCTCAGGCT 38546 >seq23 Length=202804 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||| || || || || | ||||| ||| |||| || | || || || || Sbjct 5257 ACCATGCAAATCTTCGTGAAAACCCTAACCGGCAAAACCATAACCCTAGAGGTAGAATCC 5316 Query 25056 TCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 || ||||| ||||| |||| |||| |||| ||| ||||| ||||| |||||||| Sbjct 5317 TCCGACACCATCGACAACGTCA---AAGCCAAAATTCAA-GACAAGGAAGGAATTCCACC 5372 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || ||||| || | || || ||||| |||||| | ||||||| || ||| | | ||| Sbjct 5373 AGATCAACAACGTCTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGTACTCTTGCCGA 5432 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || ||||||||||||||||| ||| | || || Sbjct 5433 TTACAACATCCAAAAAGAATCCACGCTCCATCTCGTTCT 5471 Score = 122 bits (134), Expect = 8e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || | ||||| ||| |||||||| ||||||| || || || Sbjct 5488 ATGCAAATCTTCGTCAAAACCCTAACCGGAAAAACCATCACACTCGAAGTCGAATCATCA 5547 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| || || ||||||||||||||||| || Sbjct 5548 GACACAATCGACAACGTGAAGGCGAAGATTCAA-GATAAGGAAGGGATTCCACCTGATCA 5606 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || ||||| || ||||| | || |||| | ||| | | ||||| || Sbjct 5607 GCAACGATTGATCTTTGCTGGTAAACAGCTTGAGGATGGAAGGACTCTTGCTGATTATAA 5666 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||| |||||||| || || ||| | || || || || Sbjct 5667 TATTCAGAAAGAATCTACACTTCATCTTGTTCTTAGACT 5705 >seq933 Length=173040 Score = 127 bits (140), Expect = 2e-24 Identities = 171/234 (73%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 24994 GAACA-ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 ||||| |||||||| || || || || ||||| || ||| ||||||| | || |||||| Sbjct 29007 GAACAGATGCAAATTTTCGTGAAAACATTGACTGGCAAAACCATCACCCTTGAGGTGGAG 29066 Query 25053 TCGTCTGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||||| || || || | | |||| || | || ||||| |||||||||||||| Sbjct 29067 AGTTCTGATACCATAGACAACGTTAAAGCTAAGATCCAA-GACAAGGAAGGGATTCCACC 29125 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || || || || |||| ||||| || |||||||| ||||||| ||||| | | || Sbjct 29126 AGATCAGCAAAGGCTTATCTTTGCTGGTAAACAATTGGAAGATGGCCGCACCCTTGCGGA 29185 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| || ||||| || ||||| || || | ||||| || |||| || || Sbjct 29186 TTACAACATCCAAAAGGAGTCCACCCTTCACCTTGTGCTGCGGTTAAGGGGCGG 29239 Score = 122 bits (134), Expect = 8e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || || || | || || | || ||||| ||| Sbjct 30153 ATGCAAATATTTGTGAAGACCCTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCT 30212 Query 25059 GACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| || ||||||| | ||| || || || || ||||| || ||||| Sbjct 30213 GATACAATCGATAATGTGAAAGCAAAGATTCA-AGATAAGGAGGGTATTCCCCCAGACCA 30271 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || ||||||||||||| || || || || |||| ||| ||| ||| |||||||| Sbjct 30272 GCAGAGGCTTATTTTTGCCGGTAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAA 30331 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 |||||| |||||||| || || || Sbjct 30332 TATTCAGAAAGAATCTACCCTCCA 30355 Score = 113 bits (124), Expect = 4e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || |||| ||| | || || ||| || Sbjct 29925 ATGCAAATTTTTGTTAAGACCCTTACTGGAAAGACCATAACATTGGAGGTTGAGAGTTCC 29984 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| |||||| ||| || ||||| || ||||| || ||||| Sbjct 29985 GATACAATTGACAATGTGAAGGCAAAAATTCAG-GATAAAGAGGGTATTCCTCCAGACCA 30043 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| || || || ||||||| ||| ||| ||| ||||| || Sbjct 30044 GCAGAGGCTAATTTTTGCCGGGAAGCAGTTGGAAGATGGTCGTACTCTGGCTGATTATAA 30103 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||| || || ||||| || | || || || | ||||| Sbjct 30104 TATCCAGAAGGAATCTACTTTGCACTTGGTTTTGAGGCT 30142 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| ||||||||||| || || | ||||| | || || ||| || Sbjct 29696 AATGCAAATTTTTGTGAAGACTTTGACAGGAAAGACTATCACTTTGGAGGTTGAGAGTTC 29755 Query 25058 TGACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || |||| || | ||| || || ||||| || || || || | Sbjct 29756 AGATACTATTGATAATGTGAAAGCTAAGATTCA-GGATAAGGAAGGTATCCCTCCCGATC 29814 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| || |||| ||||| || || ||| | ||||||| | | || | | ||||| | Sbjct 29815 AGCAGAGGCTTATCTTTGCTGGTAAGCAACTTGAAGATGGTAGGACACTTGCTGATTATA 29874 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGT 25207 | || ||||| |||||||| || ||||| || Sbjct 29875 ACATCCAAAAGGAATCCACTCTCCATTTGGT 29905 >seq1642 Length=65368 Score = 123 bits (136), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | || || || ||||||| ||||||| ||| || Sbjct 53934 ATGCAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 53993 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| ||||||||||| |||||||| ||| Sbjct 53994 GATACCATAGA--CAATGTTAAGGCCAAGATTCAG-GACAAAGAAGGCATTCCACCAGAC 54050 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | || ||||| || ||||| | || |||| ||| ||| | | |||||| Sbjct 54051 CAACAGAGGCTCATCTTTGCTGGAAAACAGCTTGAGGATGGTCGGACTTTAGCTGATTAC 54110 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||||| || || || ||||| ||||| Sbjct 54111 AACATTCAGAAAGAGTCTACCCTCCATTTGGTGCT 54145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || | || || | || || ||| || Sbjct 33767 ATGCAGATTTTCGTGAAGACTCTTACCGGGAAGACTATTACCTTGGAGGTAGAGAGCTCA 33826 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || || ||||||||||| || || || |||| Sbjct 33827 GACACTATTGA--CAATGTAAAGGCCAAGATACAGGACAAAGAAGGTATCCCCCCAGACC 33884 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | | |||||||| || || || | ||||||| || ||| ||| ||||| | Sbjct 33885 AGCAAAGATTGATTTTTGCTGGAAAGCAGCTGGAAGATGGCCGGACTTTGGCTGATTATA 33944 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| ||||| ||||| || || | || || | || || ||||| Sbjct 33945 ACATTCAGAAAGAGTCCACCCTTCACCTTGTCCTTCGTCTGAGGGGAGG 33993 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/160 (73%), Gaps = 6/160 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | ||||| || || | || | ||||| ||| || Sbjct 32643 ATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACCGTTACTCTTGAAGTTGAGAGTTCA 32702 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| ||||| ||||| |||||||||||| Sbjct 32703 GATACCATAGA--CAATGTTAAGGCCAAGATTCAA-GACAAGGAAGGTATTCCACCTGAC 32759 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155 ||||| || | |||||||| || ||||| | ||||||| Sbjct 32760 CAACAAAGGCTGATTTTTGCTGGAAAACAGCTTGAAGATG 32799 >seq1039 Length=240209 Score = 109 bits (120), Expect = 5e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| || ||||||| ||||||| ||| || Sbjct 129530 ATGCAAATCTTCGTTAAGACCCTCACCGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 129471 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || || || | || || | ||| || || |||||||| ||||| ||| Sbjct 129470 GATACCATAGA--CAATGTTAAGGCCAAGATTCAA-GATAAGGAAGGGATCCCACCAGAC 129414 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| || || || | || || | || || | | |||||| Sbjct 129413 CAGCAGCGTCTGATTTTTGCTGGAAAGCAGCTGGAGGACGGGCGTACCCTTGCTGATTAC 129354 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||| || |||||||| ||||| ||||| Sbjct 129353 AATATCCAAAAGGAGTCCACGCTCCATTTGGTGCT 129319 >seq1740 Length=56962 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | ||||| || | || || | || || ||| || Sbjct 21893 ATGCAGATTTTTGTGAAGACTCTTACCGGAAAGACAATAACTTTGGAGGTTGAGAGCTCA 21952 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || ||||| | || | ||| ||||| || || ||||| || || || Sbjct 21953 GACACTATTGACAATGTGAAGGCTAAGATTCAG-GACAAGGAGGGTATTCCCCCAGATCA 22011 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||||||||| ||||| || ||||||| || || ||| |||||||| Sbjct 22012 ACAAAGGTTGATTTTTGCCGGGAAACAGTTGGAAGATGGCCGGACCTTGGCTGATTACAA 22071 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||| | || || Sbjct 22072 CATCCAGAAGGAATCCACCCTTCATCTTGTCCT 22104 Score = 100 bits (110), Expect = 2e-16 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || ||| | || || | || || ||| || Sbjct 43225 ATGCAGATTTTTGTGAAGACCCTTACAGGCAAAACAATTACTTTGGAGGTTGAGAGCTCA 43166 Query 25059 GACACTATCGAGTCACTGAA---GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | || || | ||| ||||| || || || || || ||| Sbjct 43165 GACACAATTGA--CAATGTAAAGGCTAAGATTCAA-GACAAGGAGGGTATCCCTCCAGAC 43109 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | ||||||||||| ||||| || ||||||| || || ||| ||||||| Sbjct 43108 CAGCAGAGGCTCATTTTTGCCGGAAAACAGTTGGAAGATGGCCGAACCTTGGCCGATTAC 43049 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || |||||||| || ||| | || || Sbjct 43048 AACATCCAGAAGGAATCCACCCTTCATCTTGTCCT 43014 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| ||||| || ||| |||| || | || || ||| || Sbjct 42997 ATGCAGATTTTTGTAAAGACATTGACAGGGAAAACCATTACTTTGGAGGTTGAGAGTTCA 42938 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || ||| ||||| || || ||||| || ||| Sbjct 42937 GACACGATTGA--CAATGTAAAAGC-TAAGATCCAGGACAAGGAGGGCATTCCTCCGGAC 42881 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| || || || | ||||||| || || ||| |||||| Sbjct 42880 CAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACATTGGCTGATTAC 42821 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || ||| | || || Sbjct 42820 AACATCCAGAAGGAATCTACCCTTCATCTTGTCCT 42786 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| | || || || ||||||| | || |||||| || Sbjct 21665 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCA 21724 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | || || | ||| |||||||| || || ||||| ||| Sbjct 21725 GACACCATAGA--CAATGTCAAGGCCAAGATTCAA-GACAAAGAGGGAATCCCACCAGAC 21781 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | |||||||| || || || | ||||||| | || | | |||||| Sbjct 21782 CAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTCGAAGATGGCAGGACCTTAGCTGATTAC 21841 Query 25176 AATATTCAAAAAGAATCCACGCTACAT 25202 || || || ||||||||||| || ||| Sbjct 21842 AACATCCAGAAAGAATCCACCCTTCAT 21868 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || | || || | || || ||| || Sbjct 42541 ATGCAGATTTTCGTGAAGACTCTTACCGGAAAGACTATTACCTTGGAGGTAGAGAGCTCA 42482 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || ||||| || || ||||||||||| || || || ||||| Sbjct 42481 GACACTATTGACAATGTGAAGACCAAGATACAGGACAAAGAAGGTATCCCCCCAGACCAG 42422 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | |||||||| || || || | ||||||| || ||| ||| ||||| || Sbjct 42421 CAAAGGTTGATTTTTGCTGGAAAGCAGCTGGAAGATGGCCGGACTTTGGCTGATTATAAC 42362 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||| | ||| || || | || || | || || ||||| Sbjct 42361 ATTCAGAAAGAGTTCACCCTTCACCTTGTCCTTCGTCTGAGGGGAGG 42315 >seq78 Length=963227 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || | || || || | || || |||| || ||||| ||| Sbjct 604858 ATGCAGATCTTCGTGAAAACCCTAACAGGGAAGACGATAACCCTCGAGGTTGAGTCTTCT 604799 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || |||| || | || ||||| ||||| |||||||||||| Sbjct 604798 GACACAATCGA--CAATGTCAAAGCCAAGATCCAA-GACAAGGAAGGAATTCCACCTGAC 604742 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || || ||||| || || |||||||||| |||||| | | ||| ||| Sbjct 604741 CAGCAACGTCTCATCTTCGCCGGAAAGCAGTTAGAAGATGGCCGCACTCTCGCCGACTAC 604682 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || || Sbjct 604681 AACATCCAGAAGGAATCAACTCTTCA 604656 >seq37 Length=1182629 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/215 (71%), Gaps = 5/215 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| |||||||||||||| || |||| || | || ||||| || Sbjct 292168 ATGCAAATATTTGTGAAGACTTTGACCGGAAAGACCATAACCTTGGAGGTGGAAAGCTCA 292109 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| || || || || ||||| || || | Sbjct 292108 GACACCATTGA--CAATGTCAAGGCTAAGATCCAGGATAAGGAGGGTATTCCCCCAGATC 292051 Query 25117 AACAGCGGATTATTTTTGCCGG-CAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 | ||| || | || ||||| || ||||| || ||||||| | || | | |||||| Sbjct 292050 AGCAGAGGTTGATCTTTGCTGGATAAACAGTTGGAAGATGGAAGGACCCTTGCGGATTAC 291991 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || || ||| | ||||| Sbjct 291990 AATATCCAGAAGGAGTCTACCCTTCATCTTGTGCT 291956 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| ||||| |||| || | || |||||| ||| Sbjct 291939 ATGCAGATTTTTGTTAAGACTTTGACTGGTAAGACCATTACCTTGGAGGTGGAGAGCTCT 291880 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| | |||| ||| || || ||||| || || |||| || Sbjct 291879 GATACCATTGATAATGTGAAGGCCAAAATTCAG-GATAAGGAAGGTATCCCCACTGATCA 291821 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || ||||| || || || || || |||| | || | | || ||||| Sbjct 291820 GCAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGAAGGACCCTTGCTGACTACAA 291761 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 |||||| || || ||||| || || Sbjct 291760 TATTCAGAAGGAGTCCACCCTTCA 291737 >seq46 Length=1084604 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| || || || ||||| | ||||| ||||| |||||| | ||||||| || Sbjct 911567 AGGAATTCCCCCGGATCAGCAGCGATTGATTTTCGCCGGTAAACAACTTGAAGATGGACG 911508 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAG 25219 |||| ||| ||||||||||| || || ||||| || || ||| | || || ||||| | Sbjct 911507 CACTTTGGCTGATTACAATATCCAGAAGGAATCAACTCTTCATCTTGTTCTCAGGCTTCG 911448 Query 25220 AGGAGGAA 25227 || |||| Sbjct 911447 TGGTGGAA 911440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433183168782560