Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1436 116 4e-21 seq1642 113 4e-20 seq37 111 1e-19 seq1740 107 2e-18 seq23 105 6e-18 seq1039 104 2e-17 seq426 102 8e-17 seq276 102 8e-17 seq78 102 8e-17 seq933 86.0 6e-12 seq322 86.0 6e-12 >seq1436 Length=88924 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| ||||| |||||||| ||||| | | || || ||| || |||||||| || Sbjct 6840 GTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCGTCCATCCTCAAGCTGTTTACCG 6899 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||||||||||||||| || || || ||||||||||| || ||| ||| Sbjct 6900 GCAAAGATCAATCGCTGCTGATCAGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTC 6959 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | || || | |||||| || || | || | ||| || ||||||| || Sbjct 6960 ACGTTATCAATAGTATCAGAACTCTCAACCTCAAGAGTAATCGTCTTCCCGGTCAACGTC 7019 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 7020 TTCACAAAAATCTGCAT 7036 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || |||||||| || ||||||||| | | ||||| || || || |||||||| Sbjct 7296 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCCGTCTTCAAGTTGTTTTCCG 7355 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || || |||||||| |||||| ||| Sbjct 7356 GCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTG 7415 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||| | || || || | ||| | ||||||||||| || || Sbjct 7416 ACGTTGT-CGATGGTGTCAGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGT 7474 Query 127096 TTTTACAAAAATCTGCATG 127114 ||| ||||| ||||||||| Sbjct 7475 TTTCACAAAGATCTGCATG 7493 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || || | | |||||||| | |||||||||||| || ||||| ||||| | Sbjct 7037 TCCACCACGCAACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGATATTATAATCCGC 7096 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | || || || || ||||||||||||||||||| ||||| Sbjct 7097 AAGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGG 7156 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || || || ||| || ||| ||| | |||| |||| ||||| | || | Sbjct 7157 AATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTG-TCGATTGTGTCAGAGGATTCAA 7215 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||||| || | ||||| || || || ||||| || || || |||||| Sbjct 7216 CTTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACGAAGATTTGCATG 7265 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || || || | ||| ||||| | ||| |||||||| || ||||| ||||| | Sbjct 38765 CCTCCACGCAACCGAAGCACTAAATGAAGCGTGGACTCTTTCTGGATATTATAATCCGCA 38824 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || || || ||||||||||||||||||| ||||| Sbjct 38825 AGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGG 38884 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || ||| || ||| ||| | |||| |||| ||||| | || || Sbjct 38885 ATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTG-TCGATTGTGTCGGAGGATTCAAC 38943 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| || | ||||| || || || ||||| ||||| || |||||| Sbjct 38944 TTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACAAAGATTTGCATG 38992 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| ||||| |||||||| ||||| | | || | ||| || |||||||| || Sbjct 38567 GTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCCATCCTCAAGCTGTTTACCG 38626 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||||||||||||||| || || || |||||||| || || ||| ||| Sbjct 38627 GCAAAGATCAATCGCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGAATCTTCGCCTTC 38686 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | || || | |||||| || || | || | || || || |||| || Sbjct 38687 ACATTATCAATAGTATCAGAACTCTCCACCTCAAGAGTAATAGTCTTCCCCGTCAACGTC 38746 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 38747 TTCACAAAAATCTGCAT 38763 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || |||||||| || ||||||||| | | || || || || || |||||||| Sbjct 39023 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCGTCTTCGAGTTGTTTTCCG 39082 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| || || || || || || |||||||| |||||| ||| Sbjct 39083 GCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTG 39142 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||| | || || || | ||| | ||||||||||| || || Sbjct 39143 ACGTTGT-CGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGT-AGGGT 39200 Query 127096 TTTTACAAAAATCTGCATG 127114 ||| || || ||||||||| Sbjct 39201 TTTCACGAAGATCTGCATG 39219 >seq1642 Length=65368 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||||||| | ||||||||||| ||||| |||||||| | Sbjct 54160 CCACCACGGAGACGGAGCACCAAATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCT 54101 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || |||||||||||||| |||| | | ||| || || || || Sbjct 54100 AAAGTCCGACCATCCTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGA 54041 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| || |||||| || || ||| | | || | ||| || | |||||| ||| Sbjct 54040 ATGCCTTCTTTGTCCTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 53981 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| || || || || || || || ||||| Sbjct 53980 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 53934 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| ||||| || ||||| ||| || || ||| || ||||| |||||| Sbjct 33963 GTGGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCATCTTCCAGCTGCTTTCCA 33904 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||||| ||||| || || || || || || |||||| || || ||| Sbjct 33903 GCAAAAATCAATCTTTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGTATCTTGGCCTTT 33844 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | ||||| || || | ||| | || || ||||| ||||| Sbjct 33843 ACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTCCCGGTAAGAGTC 33784 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 33783 TTCACGAAAATCTGCAT 33767 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| || | || | |||||||| || ||||| ||||| || | Sbjct 34222 TCCACCACGAAGGCGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 34163 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | || || ||||| ||||||| | ||| ||||| || || Sbjct 34162 AAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGCGG 34103 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||||| ||| | | || | |||||| | ||| || || Sbjct 34102 GATTCCCTCCTTGTCCTGTATTTTTGCCTTCACATTATCTATGGTGTCTGAACTTTCTAC 34043 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || |||| || || ||||| || ||||| Sbjct 34042 CTCTAAGGTAATGGTCTTTCCAGTCAACGTCTTCACAAAGATTTGCAT 33995 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | || | ||||||||||| || || || ||||| || Sbjct 54388 CCACCACGAAGACGCAAGACAAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCAGCC 54329 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| ||||| || | || || | ||||||||| || || Sbjct 54328 AGGGTTCTGCCATCTTCGAGCTGCTTTCCTGCAAAAATTAACCTCTGCTGATCTGGGGGA 54269 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || || || || || ||||| | || | |||||| | |||||| || Sbjct 54268 ATACCTTCTTTATCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACC 54209 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || || || || || ||||| |||||||| Sbjct 54208 TCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 54162 >seq37 Length=1182629 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || |||| ||| | ||| | |||||||| || || ||||||||||| | Sbjct 291941 CCACCCCTCAAACGCAGCACAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCCGCA 292000 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTT-TCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | |||||| |||||| ||||||| | ||||||||| || || Sbjct 292001 AGGGTCCTTCCATCTTCCAACTGTTTATCCAGCAAAGATCAACCTCTGCTGATCTGGGGG 292060 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| ||| || ||||| | || | |||||| | || || || Sbjct 292061 AATACCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCCAC 292120 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||||| ||| || ||||| || ||||| Sbjct 292121 CTCCAAGGTTATGGTCTTTCCGGTCAAAGTCTTCACAAATATTTGCAT 292168 >seq1740 Length=56962 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || || || |||||||| ||| || || ||| || ||||| |||||| Sbjct 42801 GTAGATTCCTTCTGGATGTTGTAATCAGCCAATGTTCGGCCATCTTCAAGCTGCTTTCCA 42860 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| | ||||| || ||||| ||||||||||||||| ||| || || Sbjct 42861 GCAAAAATCAACCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTT 42920 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | |||||| || || | || | ||||| || |||| || Sbjct 42921 ACATTGTCAATCGTGTCTGAACTCTCAACCTCCAAAGTAATGGTTTTCCCTGTCAATGTC 42980 Query 127097 TTTACAAAAATCTGCAT 127113 ||||||||||||||||| Sbjct 42981 TTTACAAAAATCTGCAT 42997 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| || | ||| | |||||||| || ||||| ||||| || | Sbjct 42086 TCCACCACGAAGGCGCAAAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 42145 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | || || ||||| ||||||| | ||||||||| || || Sbjct 42146 AAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGG 42205 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||||| ||||| | || | ||||| | ||| || || Sbjct 42206 GATTCCCTCCTTGTCCTGTATTTTGGCCTTGACATTATCAATTGTGTCTGAACTTTCTAC 42265 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || |||| || || ||||| || ||||| Sbjct 42266 CTCTAAGGTAATGGTCTTTCCAGTCAAGGTCTTCACAAAGATTTGCAT 42313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || |||||||| ||| || || ||| || ||||| || ||| Sbjct 22317 GTGGATTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCTTCAAGCTGCTTCCCA 22258 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || | || |||||| || ||||| ||||||||||||||| ||| || || Sbjct 22257 GCGAAAATGAGTCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTAGCTTTT 22198 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | |||||| || || | || | || || || |||| || Sbjct 22197 ACATTGTCAATTGTGTCTGAACTCTCAACCTCCAAAGTGATGGTCTTCCCTGTCAAGGTC 22138 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 22137 TTCACAAAGATTTGCATGCCT 22117 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 126921 ACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGT 126980 ||||||| ||||| || ||||| ||| || || ||| || ||||| |||||||| Sbjct 42349 ACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCATCTTCCAGCTGCTTTCCAGCAA 42408 Query 126981 AGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTT 127040 | ||||| | ||||| || || || || || || |||||| || || ||| | | Sbjct 42409 AAATCAACCTTTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGTATCTTGGTCTTCACAT 42468 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 || | ||||| | ||||| || || | ||| | || || ||||| ||||| || | Sbjct 42469 TGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTTCCGGTAAGAGTCTTCA 42528 Query 127101 CAAAAATCTGCAT 127113 | ||||||||||| Sbjct 42529 CGAAAATCTGCAT 42541 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||||||| ||| || || ||| || | ||||||||| Sbjct 43029 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCATCTTCCAACTGTTTTCCG 43088 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | || | | |||||| || ||||| || ||||||||||| || || ||| Sbjct 43089 GCAAAAATGAGCCTCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCTTAGCCTTT 43148 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | ||||| || || | || | |||||||| || || || Sbjct 43149 ACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTAATTGTTTTGCCTGTAAGGGTC 43208 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 43209 TTCACAAAAATCTGCAT 43225 >seq23 Length=202804 Score = 105 bits (116), Expect = 6e-18 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | || | ||| | ||| || |||||||| || ||||||||| | Sbjct 5486 CCTCCGCGGAGACGGAGAACGAGATGGAGCGTGGATTCTTTTTGGATGTTGTAATCGGCA 5427 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || |||||||| ||| |||| | || || ||||| || || Sbjct 5426 AGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAGACGTTGTTGATCTGGTGGA 5367 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTT-GA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || |||||||| ||| ||| |||| || ||||| ||| |||||| | || | Sbjct 5366 ATTCCTTCCTTGTCT-TGAATTTTGGCTTTGACGTTGT-CGATGGTGTCGGAGGATTCTA 5309 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 | || | ||| | ||||||||||| || ||||| || || || ||||||| Sbjct 5308 CCTCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCACGAAGATTTGCATGG 5258 >seq1039 Length=240209 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||||||| | ||| ||||| ||||| ||||||||||| | Sbjct 129304 CCACCACGGAGACGGAGCACCAAATGGAGCGTGGACTCCTTTTGGATATTGTAATCAGCA 129363 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| |||||||| | |||| |||||||| || || || Sbjct 129364 AGGGTACGCCCGTCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 129423 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| || || || ||| | | || | ||| || | |||||| ||| Sbjct 129424 ATCCCTTCCTTATCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 129483 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || || || || ||||| Sbjct 129484 TCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATTTGCAT 129530 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||| | || | || |||||||| || || || ||||| || Sbjct 129076 CCACCACGAAGACGCAACACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCAGCC 129135 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||||||||| || | ||||| | ||||||||| || || Sbjct 129136 AGGGTTCTGCCATCTTCGAGCTGTTTTCCCGCAAAAATCAACCTCTGCTGATCTGGGGGA 129195 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || || || || || ||||| | || | |||||| | |||||| || Sbjct 129196 ATACCTTCTTTATCTTGTATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCTACC 129255 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || || || || || ||||| |||||||| Sbjct 129256 TCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 129302 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || || || || || || |||||||| ||| || || ||| || Sbjct 128866 ACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCATCTTCG 128925 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| |||||||| | ||||| | |||||||| || || || |||||||| ||| Sbjct 128926 AGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGAATTCCCTCCTTATCCTGT 128985 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | || | ||||| | ||||| || || | || | || || Sbjct 128986 ATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATTGTCTTA 129045 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||||||| || ||||||||||| Sbjct 129046 CCGGTAAGAGTTTTCACGAAAATCTGCAT 129074 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| || | || | |||||||| || ||||| ||||| || | Sbjct 128619 TCCACCACGAAGGCGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGC 128678 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || | || || ||||| ||||||| | ||||||||| || || Sbjct 128679 AAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGG 128738 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| ||||| ||||| | |||| || || | ||| || || Sbjct 128739 GATTCCCTCCTTGTCTTGTATTTTTGCCTTGACATTATCGATCGTATCTGAACTTTCTAC 128798 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||| || ||||| |||||||| Sbjct 128799 CTCCAATGTAATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 128846 >seq426 Length=522792 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| ||| | | ||||| || || ||||||||||| Sbjct 162622 GTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTGTTTTCCT 162681 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||| || ||||| || || || || |||||||| |||||| |||| Sbjct 162682 GCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTG 162741 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| || | | || || |||| ||| | ||| || || || || || Sbjct 162742 ACGTTG-TCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGTTAGGGT 162800 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 162801 TTTGACGAAGATCTGCAT 162818 >seq276 Length=436033 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| ||| | | ||||| || || ||||||||||| Sbjct 192451 GTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTGTTTTCCG 192392 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||| || ||||| || || || || |||||||| |||||| |||| Sbjct 192391 GCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTG 192332 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| || | | || || |||| ||| | ||| || || || || || Sbjct 192331 ACGTTG-TCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGTGAGGGT 192273 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 192272 TTTGACGAAGATCTGCAT 192255 >seq78 Length=963227 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || |||||||| ||| | | ||||| || || ||||||||||| Sbjct 597701 GTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTCAAGCTGTTTTCCG 597760 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||| || ||||| || || || || |||||||| |||||| |||| Sbjct 597761 GCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTG 597820 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||| || | | || || |||| ||| | ||| || || || || || Sbjct 597821 ACGTTG-TCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCCGTTAGGGT 597879 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || |||||||| Sbjct 597880 TTTGACGAAGATCTGCAT 597897 >seq933 Length=173040 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| |||||||| | || || || ||||| || || ||||| | | || | | | Sbjct 29911 CGCAAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGTGTCCTACCA 29852 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || || || || ||||| |||| | | ||||||||||||||| || || ||||| Sbjct 29851 TCTTCAAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGAGGGATACCTTCCTTA 29792 Query 127019 TCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| | | || || | | || | || || | |||||| || || | || | Sbjct 29791 TCC-TGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTGAT 29733 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || |||| ||| || |||||||| ||||| Sbjct 29732 AGTCTTTCCTGTCAAAGTCTTCACAAAAATTTGCAT 29697 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | |||| | ||||||||| | ||||| || || || || |||||||| | Sbjct 29696 TCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGC 29637 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || || || || || || |||| | | ||||||||||||||| Sbjct 29636 TAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCGGGAGG 29577 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| ||| ||| | | || || | | || | || || | |||||| | Sbjct 29576 GATACCTTCCTTATCC-TGAATCTTGGCTTTCACATTATCAATAGTATCTGAACTCTCAA 29518 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || || || || | ||| || |||||||||||||| Sbjct 29517 CCTCTAAAGTAATAGTCTTCCCTGTTAAAGTCTTCACAAAAATCTGCAT 29469 >seq322 Length=397916 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | |||| | ||||||||| | ||||| || || || || |||||||| | Sbjct 312302 TCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGTATGTTGTAATCTGC 312361 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || || ||||| || || |||| | | ||||||||| ||||| Sbjct 312362 TAGGGTTCTTCCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGG 312421 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||| ||| ||| | | |||| | | |||| || || | |||||| | Sbjct 312422 GATTCCTTCCTTATCC-TGAATCTTAGCTTTCACATTATCGATAGTATCTGAACTCTCAA 312480 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || || || || | ||| || |||||||||||||| Sbjct 312481 CCTCTAAAGTAATAGTCTTTCCTGTTAAAGTCTTCACAAAAATCTGCAT 312529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475337798325760