Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1436 102 5e-17 seq1740 100 2e-16 seq276 98.7 6e-16 seq78 96.9 2e-15 seq1642 95.1 8e-15 seq23 93.3 3e-14 seq1039 89.7 3e-13 seq426 89.7 3e-13 seq322 89.7 3e-13 >seq1436 Length=88924 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||| | ||| | ||| |||||||||||| ||||| || | ||| | ||| | Sbjct 6821 CCTGAGAACAAGGTGGAGTGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCGTCC 6880 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || |||||||| |||||||| || | ||| ||||| || | || | |||||||| Sbjct 6881 ATCCTCAAGCTGTTTACCGGCAAAGATCAATCGCTGCTGATCAGGTGGAATACCCTCCTT 6940 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||||||| || ||| | || | ||| |||||| || | || || Sbjct 6941 GTCTTGAATCTTCGCCTTCACGTTATCAATAGTATCAGAACTCTCAACCTCAAGAGTAAT 7000 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || | ||||||||||| |||||||| Sbjct 7001 CGTCTTCCCGGTCAACGTCTTCACAAAAATCTGCAT 7036 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 34784 TGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCC 34843 |||| |||||| || ||||| || || | ||| | || | || || || |||||||| Sbjct 7295 TGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCCGTCTTCAAGTTGTTTTCC 7354 Query 34844 GGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTT 34903 ||| || || || || |||||||| | || | || |||||||| || || ||| Sbjct 7355 GGCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCTTT 7414 Query 34904 GACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGT 34963 |||| | || | ||| || || || || | |||||||||||| || || || || Sbjct 7415 GACGTTGTCGATGGTGTCAGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGT 7474 Query 34964 CTTCACAAAGATCTGCAT 34981 ||||||||||||||||| Sbjct 7475 TTTCACAAAGATCTGCAT 7492 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || | |||||| | |||||| |||| || |||||||| || ||||| |||| Sbjct 7036 TTCCACCACGCAACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGATATTATAATCCG 7095 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| ||| |||| |||| || || || ||||| || | ||| ||||| || | | Sbjct 7096 CAAGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAG 7155 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || || || ||||||| || ||| | || | ||| || |||| Sbjct 7156 GAATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGGATTCAA 7215 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||| || ||||||||||| || || || || || ||||| ||||| Sbjct 7216 CTTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACGAAGATTTGCAT 7264 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||| | ||||| || |||||||||||| ||||| || | ||| | | | | Sbjct 38548 CCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCC 38607 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| || |||||||| |||||||| || | ||| ||||| || | || | ||||||||| Sbjct 38608 ATCCTCAAGCTGTTTACCGGCAAAGATCAATCGCTGCTGATCAGGTGGAATCCCCTCCTT 38667 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGG 34941 || ||||||| || || || |||| || ||| ||| || || | | Sbjct 38668 ATCTTGAATCTTCGCCTTCAC--AT--TATCAATAGTATCAGAACTCTCCACCTCAAGAG 38723 Query 34942 TTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || ||||| | ||||||||||| |||||||| Sbjct 38724 TAATAGTCTTCCCCGTCAACGTCTTCACAAAAATCTGCAT 38763 Score = 89.7 bits (98), Expect = 3e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||| | |||| |||||| || ||||| || || | ||| |||| | || || || || Sbjct 39016 GTGGAGTGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCGTCTTCGAGTTG 39075 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 ||||||||| || || || || || |||||| | || | || |||||||| || || Sbjct 39076 TTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATTTT 39135 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 ||||||| | || | || || || || || | |||||||||||| || || Sbjct 39136 GGCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGT 39195 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| ||||||||||| Sbjct 39196 -AGGGTTTTCACGAAGATCTGCAT 39218 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||||| | || || |||| ||| |||||||| || ||||| |||| | Sbjct 38765 CCTCCACGCAACCGAAGCACTAAATGAAGCGTGGACTCTTTCTGGATATTATAATCCGCA 38824 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || ||| |||| |||| || || || ||||| || | ||| ||||| || | || Sbjct 38825 AGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGG 38884 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || ||||||| || ||| | || | || || ||||| Sbjct 38885 ATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCGGAGGATTCAACT 38944 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || ||||||||||| || || || || |||||||| ||||| Sbjct 38945 TCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACAAAGATTTGCAT 38991 >seq1740 Length=56962 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||| | | || | |||| ||| ||| ||||| ||||| || || | Sbjct 42999 CCGCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 43058 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | |||| |||| |||| ||||||||||||||| || || | ||||||||| | || Sbjct 43059 AAGGTTCGGCCATCTTCCAACTGTTTTCCGGCAAAAATGAGCCTCTGCTGGTCTGGAGGG 43118 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| |||||| || || | || | || | |||||| Sbjct 43119 ATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAACC 43178 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || ||||| || || || ||||||||||| ||||||||| Sbjct 43179 TCCAAAGTAATTGTTTTGCCTGTAAGGGTCTTCACAAAAATCTGCATA 43226 Score = 98.7 bits (108), Expect = 6e-16 Identities = 148/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| ||| ||||||||| ||||| || || | | | | | |||| || | Sbjct 21872 CAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCTGCCATCTTCGA 21813 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 |||| ||||| ||||| || | | |||||||||| | || | ||||| ||||| || Sbjct 21812 GCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTCTTGAA 21753 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 |||| ||||| |||| | || | ||| || || | ||| ||||| |||| Sbjct 21752 TCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTTC 21693 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| ||||| ||||||||||||||| Sbjct 21692 CAGTGAGGGTCTTTACAAAGATCTGCATA 21664 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 34779 TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGT 34838 |||| ||| ||| ||||| ||||| || || | | | | |||| || |||||| Sbjct 43584 TGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCTAATGTCCTGCCATCTTCAAGCTGT 43643 Query 34839 TTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTC 34898 ||||| ||||| ||||| | ||| |||||| | || | || |||||||| |||||| Sbjct 43644 TTTCCAGCAAAAATTAGCCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTG 43703 Query 34899 TGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCC 34954 ||||| || |||| || | ||| ||| || || | ||| | ||| ||||| Sbjct 43704 ACCTTGAC--AT--TATCTATGGTATCCGAACTCTCTACCTCAAGGGTGACGGTCTTTCC 43759 Query 34955 CGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||||||||||||||| ||||| Sbjct 43760 AGTGAGAGTCTTCACAAAGATTTGCAT 43786 >seq276 Length=436033 Score = 98.7 bits (108), Expect = 6e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| || || ||||| | ||| | || | || || Sbjct 192464 AACAAGGTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTC 192405 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||||||||| || || |||||||| || || | || | || |||||||| Sbjct 192404 AAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTG 192345 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| | || | ||| | ||||| |||| |||||| || || Sbjct 192344 GATTTTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTT 192285 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAGA 34990 |||||||| || || || ||||||||||| |||| ||| Sbjct 192284 ACCCGTGAGGGTTTTGACGAAGATCTGCATCTTCGGAGA 192246 >seq78 Length=963227 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| ||||| ||||| | || | || |||| || Sbjct 604649 AACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCTTC 604708 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 | ||| |||||||| || || || ||||||||||| | || | || |||||||| Sbjct 604709 TAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTG 604768 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| |||||| || | ||||| ||| | |||||| |||| |||||| | Sbjct 604769 GATCTTGGCTTTGAC--AT--TGTCGATTGTGTCAGAAGACTCAACCTCGAGGGTTATCG 604824 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || || || || || ||||| ||||||||||| || Sbjct 604825 TCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 604861 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| || || ||||| | ||| | || | || || Sbjct 597688 AACAAGGTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTC 597747 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||||||||| || || |||||||| || || | || | || |||||||| Sbjct 597748 AAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTG 597807 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| | || | ||| | ||||| |||| |||||| || || Sbjct 597808 GATTTTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTT 597867 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAGA 34990 ||||| || || || || ||||||||||| |||| ||| Sbjct 597868 ACCCGTTAGGGTTTTGACGAAGATCTGCATCTTCGGAGA 597906 >seq1642 Length=65368 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| |||||||| || | ||| ||| |||| || ||||| ||||| ||||| Sbjct 54352 TCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCATCTTCGAGCTGCTTTCCTGCAAAA 54293 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||| | ||||| ||| | || | || || || || |||||| ||||| Sbjct 54292 ATTAACCTCTGCTGATCTGGGGGAATACCTTCTTTATCTTGAATCTTGGCCTTGACATTG 54233 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||| | ||| ||| || || | ||| ||||| ||||| ||||| ||||| ||| Sbjct 54232 TCTATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACA 54173 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 54172 AAGATCTGCATA 54161 >seq23 Length=202804 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 |||| |||| ||| |||||||||||| ||||| || | ||| | | | |||| || | Sbjct 5695 CAAGATGAAGTGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCCATCCTCAA 5636 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 ||||||| || ||||| || | ||||||||| || | || | ||| ||||| || || Sbjct 5635 GCTGTTTACCAGCAAAGATCAATCGTTGCTGATCAGGTGGAATCCCTTCCTTATCTTGAA 5576 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 ||||| || ||| | || | || | || || |||| || |||||||||| Sbjct 5575 TCTTCGCCTTCACGTTGTCGATTGTGTCTGATGATTCGACTTCGAGTGTGATGGTTTTTC 5516 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || || || || || ||||| ||||| Sbjct 5515 CGGTTAGGGTTTTGACGAAGATTTGCAT 5488 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 |||||| || ||||| || || | ||| | || |||| || || ||||||||||| || Sbjct 5451 TTCTTTTTGGATGTTGTAATCGGCAAGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAA 5392 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||| || ||| | || | || |||||||| ||| || ||||||| Sbjct 5391 GATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTGTCTTGAATTTTGGCTTTGACGTT 5332 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || || || || || | |||||||||||| || || || || ||||| Sbjct 5331 GTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCAC 5272 Query 34970 AAAGATCTGCAT 34981 ||||| ||||| Sbjct 5271 GAAGATTTGCAT 5260 >seq1039 Length=240209 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| |||||||| || | ||| ||| |||| || ||||||||||| ||||| Sbjct 129112 TCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCATCTTCGAGCTGTTTTCCCGCAAAA 129171 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||| ||| | || | || || || || ||||| ||||| Sbjct 129172 ATCAACCTCTGCTGATCTGGGGGAATACCTTCTTTATCTTGTATCTTGGCCTTGACATTG 129231 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||| | ||| ||| || || | ||| ||||| ||||| ||||| ||||| ||| Sbjct 129232 TCTATGGTGTCAGAACTCTCTACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACA 129291 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 129292 AAGATCTGCATA 129303 >seq426 Length=522792 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| || ||| ||||| || || ||||| | ||| | || | || || Sbjct 162609 AACAAGGTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCTTC 162668 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||||| || || || |||||||| || || | || | || |||||||| Sbjct 162669 AAGCTGTTTTCCTGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTG 162728 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| | || | ||| | ||||| |||| |||||| || || Sbjct 162729 GATTTTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTT 162788 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAGA 34990 ||||| || || || || ||||||||||| |||| ||| Sbjct 162789 ACCCGTTAGGGTTTTGACGAAGATCTGCATCTTCGGAGA 162827 >seq322 Length=397916 Score = 89.7 bits (98), Expect = 3e-13 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || ||||| || | ||||| |||| || ||| ||||| ||||| || || | Sbjct 312301 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGTATGTTGTAATCTG 312360 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| ||| | |||| || || ||||| || ||||| || || | ||||| ||| | | Sbjct 312361 CTAGGGTTCTTCCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAG 312420 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTC-ACCGGC---C 34928 | | || ||||| || |||||| ||| || || ||||||| | | | | Sbjct 312421 GGATTCCTTCCTTATCCTGAATCTTAGCTTTCAC--AT--TATCGATAGTATCTGAACTC 312476 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || | || || || ||||| || | |||||||||||| |||||||| Sbjct 312477 TCAACCTCTAAAGTAATAGTCTTTCCTGTTAAAGTCTTCACAAAAATCTGCAT 312529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324525097711872