Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1436 170 2e-37 seq1642 147 2e-30 seq23 145 6e-30 seq933 143 2e-29 seq322 138 9e-28 seq1740 131 1e-25 seq37 129 5e-25 seq1039 123 2e-23 >seq1436 Length=88924 Score = 170 bits (188), Expect = 2e-37 Identities = 170/219 (78%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 101253 AACGTAA-AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 ||| ||| ||| |||||||| ||||| ||||| || ||||| ||||| || | |||||| Sbjct 7047 AACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTC 7106 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| ||||||||||| |||||||| ||||| ||||| ||||| || ||||| |||||| Sbjct 7107 CCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGAATTCCTTCT 7166 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 ||||| ||||| || || || | || | |||||||| | ||| ||||| || ||| Sbjct 7167 TTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGGATTCAACTTCGAGTGTG 7226 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| || |||| ||||| || || || |||||| Sbjct 7227 ATGGTTTTTCCAGTTAGGGTTTTGACGAAGATTTGCATG 7265 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | || || | ||||||||||| || || ||||| || ||||| ||||| || Sbjct 38765 CCTCCACGCAACCGAAGCACTAAATGAAGCGTGGACTCTTTCTGGATATTATAATCCGCA 38824 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| ||||||||||| |||||||| ||||| ||||| ||||| || || Sbjct 38825 AGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGG 38884 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||| ||||| || || || | || | ||||| || | ||| ||| Sbjct 38885 ATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCGGAGGATTCAACT 38944 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || |||| ||||| || |||| ||||| ||||| || |||||| Sbjct 38945 TCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACAAAGATTTGCATG 38992 Score = 141 bits (156), Expect = 7e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| ||||||||||| || ||||| ||||| || | ||| || |||| || | || Sbjct 38561 TGAAGAGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCCATCCTCAAGCTGT 38620 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||| ||||| ||||| || ||||| || || ||||||||||| || Sbjct 38621 TTACCGGCAAAGATCAATCGCTGCTGATCAGGTGGAATCCCCTCCTTATCTTGAATCTTC 38680 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||| ||||| | ||||| |||||||| | || || || || Sbjct 38681 GCCTTCACATTATCAATAGTATCAGAACTCTCCACCTCAAGAGTAATAGTCTTCCCCGTC 38740 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 38741 AACGTCTTCACAAAAATCTGCAT 38763 Score = 140 bits (154), Expect = 3e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||| || || ||||||||||| || ||||||||||| | ||| | | | Sbjct 7277 ACGGAGAACGAGATGGAGTGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCC 7336 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||| || || || || || | |||||| || || || ||||| ||||| || Sbjct 7337 GTCTTCAAGTTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTT 7396 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| ||||| ||| || | || | |||||||| | ||| || || || || | Sbjct 7397 GTCTTGGATTTTGGCTTTGACGTTGTCGATGGTGTCAGAGGATTCTACCTCTAGGGTTAT 7456 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||||||||||| ||||| ||||| ||||||||| Sbjct 7457 GGTTTTGCCGGTTAGGGTTTTCACAAAGATCTGCATG 7493 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || ||||||||||| || ||||| ||||| || | ||| | |||| || | || Sbjct 6834 TGGAGTGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCGTCCATCCTCAAGCTGT 6893 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||| ||||| ||||| || ||||| || || || |||||||| || Sbjct 6894 TTACCGGCAAAGATCAATCGCTGCTGATCAGGTGGAATACCCTCCTTGTCTTGAATCTTC 6953 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||| ||||| | || || |||||||| | ||| || ||||| Sbjct 6954 GCCTTCACGTTATCAATAGTATCAGAACTCTCAACCTCAAGAGTAATCGTCTTCCCGGTC 7013 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 7014 AACGTCTTCACAAAAATCTGCAT 7036 Score = 125 bits (138), Expect = 6e-24 Identities = 151/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || ||||||||||| || ||||||||||| | ||||| | | || || | ||| Sbjct 39017 TGGAGTGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCGTCTTCGAGTTGT 39076 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||||||||| || || ||||| ||||| || ||||| ||||| Sbjct 39077 TTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGATTTTG 39136 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| || | || | ||||| || | ||| || || || || | |||||||||| | Sbjct 39137 GCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGG-T 39195 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | ||||| || || ||||||||| Sbjct 39196 AGGGTTTTCACGAAGATCTGCATG 39219 >seq1642 Length=65368 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||||||||||| ||||| || || || ||||| || | |||||| | Sbjct 54377 ACGCAAGACAAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCC 54318 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| |||||||| || || | ||| ||||| || ||||| |||||||| Sbjct 54317 ATCTTCGAGCTGCTTTCCTGCAAAAATTAACCTCTGCTGATCTGGGGGAATACCTTCTTT 54258 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| || || ||| | |||| |||||||| | ||||| ||||| |||| Sbjct 54257 ATCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGTGAT 54198 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || ||||| |||||||| Sbjct 54197 GGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 54162 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || ||||| | ||||| ||||| || || || || ||||| || || | ||| || || Sbjct 34209 CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCA 34150 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||||||||| || ||||| ||||| | ||||||||| ||||| || || || || Sbjct 34149 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGCGGGATTCCCTCCTTG 34090 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || || |||||| || ||| | |||| ||||| || |||| || || | || | Sbjct 34089 TCCTGTATTTTTGCCTTCACATTATCTATGGTGTCTGAACTTTCTACCTCTAAGGTAATG 34030 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || || || ||||| || ||||| Sbjct 34029 GTCTTTCCAGTCAACGTCTTCACAAAGATTTGCAT 33995 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| |||||||| ||||| || || |||||||| || | ||| | |||| || Sbjct 54142 ACCAAATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCTAAAGTCCGACCATCCTCA 54083 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || ||||| || | | |||||| || || |||||||||||||| || ||| Sbjct 54082 AGCTGTTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCTGA 54023 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | |||| || || || | || ||||| ||||||| || ||| Sbjct 54022 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 53963 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 53962 CCAGTGAGGGTCTTAACGAAGATTTGCAT 53934 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101313 CATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTT 101372 |||| || | || || || ||||| |||| | ||||| || || ||||| ||||| | Sbjct 32799 CATCTTCAAGCTGTTTTCCAGCAAAAATCAGCCTTTGTTGGTCAGGTGGAATACCTTCCT 32740 Query 101373 TATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGA 101432 | |||||||| || || ||| | |||| || || || | || ||||||||||| | Sbjct 32739 TGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTAA 32680 Query 101433 CCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || |||||||| | || || ||||| || ||||| Sbjct 32679 CGGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 32643 >seq23 Length=202804 Score = 145 bits (160), Expect = 6e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | ||| | ||| || || ||||||||||| || ||||||||||| Sbjct 5486 CCTCCGCGGAGACGGAGAACGAGATGGAGCGTGGATTCTTTTTGGATGTTGTAATCGGCA 5427 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||| || || || || || | ||| |||||||| || ||| Sbjct 5426 AGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAGACGTTGTTGATCTGGTGGA 5367 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||||||||| ||| || | || | ||||| || | ||| || Sbjct 5366 ATTCCTTCCTTGTCTTGAATTTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACC 5307 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || || | ||||||||||||| ||||| || || || |||||||| Sbjct 5306 TCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCACGAAGATTTGCATGGT 5257 Score = 145 bits (160), Expect = 6e-30 Identities = 166/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | |||||| ||||||||||| || ||||| ||||| || | ||| || |||| || Sbjct 5697 AACAAGATGAAGTGTAGATTCTTTCTGAATATTATAATCAGCAAGAGTCCTTCCATCCTC 5638 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | || ||||| ||||| ||||| || || ||||| || ||||| ||||| |||||||| Sbjct 5637 AAGCTGTTTACCAGCAAAGATCAATCGTTGCTGATCAGGTGGAATCCCTTCCTTATCTTG 5578 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||| || || || | || | ||||| || | ||| ||||| || |||| ||||| Sbjct 5577 AATCTTCGCCTTCACGTTGTCGATTGTGTCTGATGATTCGACTTCGAGTGTGATGGTTTT 5518 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 ||||||| ||||| || || || |||||| | |||| ||| Sbjct 5517 TCCGGTTAGGGTTTTGACGAAGATTTGCATGCCTCCGCGGAGA 5475 >seq933 Length=173040 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || || || |||||||| | Sbjct 29697 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAG 29638 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | |||||| |||||||| || | | ||| |||||||| | Sbjct 29637 CTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCGGGAG 29578 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| ||||| ||||| || ||| ||| | || | ||| || || | || | Sbjct 29577 GGATACCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTATCTGAACTCTCAA 29518 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||| | || || || |||||||| || ||||| |||||||| Sbjct 29517 CCTCTAAAGTAATAGTCTTCCCTGTTAAAGTCTTCACAAAAATCTGCAT 29469 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || || || |||||||| | Sbjct 29469 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAG 29410 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | |||||| |||||||| || | | ||| ||||| || | Sbjct 29409 CTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 29350 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||| ||||| || || || || || ||| | || | || || || | ||| | Sbjct 29349 GGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCGGAGGATTCAA 29290 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| |||| ||||| || || || || || || |||||||||||| Sbjct 29289 CCTCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCATG 29240 Score = 131 bits (144), Expect = 1e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | || |||||||||||||| || ||||||||||| || | ||| | | Sbjct 30368 ACGAAGAACAAGGTGGAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACC 30309 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||| |||||||| ||||| || | | ||| || || || ||||| || || || Sbjct 30308 ATCCTCCAACTGCTTACCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTT 30249 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| ||| ||| ||| | || | || ||||| ||||||| || | || | Sbjct 30248 ATCTTGAATCTTTGCTTTCACATTATCGATTGTATCAGAGCTTTCCACCTCCAAGGTAAT 30189 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || | || || |||||||| |||||| Sbjct 30188 AGTCTTCCCAGTAAGGGTCTTCACAAATATTTGCATG 30152 >seq322 Length=397916 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || ||||| |||||||| | Sbjct 312301 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGTATGTTGTAATCTG 312360 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | ||| || |||||||| || | | ||| ||||| || | Sbjct 312361 CTAGGGTTCTTCCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAG 312420 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || ||||| ||||| ||||| || ||| ||| | || | ||| || || | || | Sbjct 312421 GGATTCCTTCCTTATCCTGAATCTTAGCTTTCACATTATCGATAGTATCTGAACTCTCAA 312480 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||| | || || || |||||||| || ||||| |||||||| Sbjct 312481 CCTCTAAAGTAATAGTCTTTCCTGTTAAAGTCTTCACAAAAATCTGCAT 312529 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | ||| ||||||||||||||||| || || || |||||||| | Sbjct 333638 TTCCACCTCTCAATCTAAGAACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAG 333697 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | |||||| |||||||| || | | ||| ||||| || | Sbjct 333698 CTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCACTGCTGATCAGGAG 333757 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||| ||||| || || || || || ||| | || | || || || | ||| | Sbjct 333758 GGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCTGAGGATTCAA 333817 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||| ||||||| || || || || || ||||||||||| Sbjct 333818 CCTCAAGGGTGATAATTTTGCCAGTCAAGGTCTTAACGAATATCTGCAT 333866 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || || || |||||||| | Sbjct 312529 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAG 312588 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | |||||| |||||||| || | | ||| ||||| || | Sbjct 312589 CTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 312648 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||| ||||| || || || || || ||| | || | || || || | ||| | Sbjct 312649 GGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCGGAGGATTCAA 312708 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| |||| ||||| || || || || || || |||||||||||| Sbjct 312709 CCTCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCATG 312758 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || ||||| |||||||| | Sbjct 312073 TTCCACCTCTCAATCTAAGTACCAAATGAAGGGTAGATTCCTTCTGTATGTTGTAATCAG 312132 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | || || |||||||| || | | ||| ||||| || | Sbjct 312133 CTAGGGTTCTTCCATCCTCAAGCTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAG 312192 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || |||||||| ||||| || ||| ||| | || | ||| || || | || | Sbjct 312193 GGATTCCCTCTTTATCCTGAATCTTAGCTTTCACATTATCGATAGTATCTGAACTCTCAA 312252 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||| | ||||| || || ||||| || ||||| || ||||| Sbjct 312253 CCTCCAAAGTAATAGTTTTTCCTGTCAAAGTCTTAACAAAAATTTGCAT 312301 Score = 87.8 bits (96), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 101294 TAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGA 101353 ||||| || | ||| | |||| ||||| ||||| || ||||| || | | ||| || Sbjct 311670 TAATCAGCCAGAGTACGACCATCTTCCAACTGCTTCCCGGCAAAAATTAGCCTCTGCTGG 311729 Query 101354 TCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGAC 101413 || || ||||| || |||||||||||||| ||| ||| ||| | || | |||||| || Sbjct 311730 TCTGGAGGAATACCCTCTTTATCTTGAATCTTTGCTTTCACATTGTCAATAGTGTCGGAA 311789 Query 101414 GTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || | ||| | || || || || | || || ||||| || ||||| Sbjct 311790 CTCTCAACCTCCAAAGTTATGGTCTTTCCAGTAAGGGTCTTAACAAAAATTTGCAT 311845 >seq1740 Length=56962 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || ||||| | || | ||||||||||||||| || || || |||||||| || Sbjct 42771 CCTCCCCTCAAACGAAGGACAAGATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCC 42830 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| | |||| || | ||||| || ||||| ||||| | || || || || ||| Sbjct 42831 AATGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCCGGAGGA 42890 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || || || || ||||||| | || | ||||| || | || || Sbjct 42891 ATGCCCTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATCGTGTCTGAACTCTCAACC 42950 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | ||||| || || || || |||||||| |||||||| Sbjct 42951 TCCAAAGTAATGGTTTTCCCTGTCAATGTCTTTACAAAAATCTGCAT 42997 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||| || || ||||| || |||||||| || | || | |||| ||| Sbjct 21645 ACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCC 21586 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || ||||| || ||||| |||| |||||| || || || || || ||||| ||||||||| Sbjct 21585 AACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCTTGA 21526 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| ||| | |||| || ||||| | || ||||| ||||| | ||||| Sbjct 21525 ATCTTGGCTTTAACATTGTCTATGGTATCAGAACTCTCAACTTCGAGAGTAATGGTTTTA 21466 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 21465 CCAGTGAGGGTCTTGACAAAGATTTGCAT 21437 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || || || || || ||||| || || | ||| || |||| ||||||||| Sbjct 22551 TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAATTGC 22492 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| ||||| | ||| ||||| || || || ||||| || || || |||||| Sbjct 22491 TTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGTATTTTT 22432 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || |||| ||||| | |||| || || ||||| Sbjct 22431 GCCTTGACATTATCAATTGTGTCTGAACTTTCTACTTCCAAGGTGATGGTCTTTCCGGTC 22372 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| |||||||| Sbjct 22371 AATGTCTTCACAAAGATCTGCAT 22349 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| ||||| ||||| || || ||||| || |||||||| || | || | | Sbjct 43799 ACGGAAAACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGACC 43858 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| ||||| || ||||| |||| |||||| || |||| | || ||||| || Sbjct 43859 ATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCGGATAGGATCCCTTCCTT 43918 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| || || ||| | ||||| || || || | || ||||| ||||| || Sbjct 43919 ATCTTGAATCTTGGCCTTAACATTGTCTACGGTATCTGAACTCTCAACTTCGAGAGTAAC 43978 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| || | | | |||||||| ||||| Sbjct 43979 AGTCTTGCCAGTGAGGGCCGTAACAAATATTTGCAT 44014 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || ||||| | || | ||||||||| ||||| || || || ||||||||||| Sbjct 42999 CCGCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 43058 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| | |||| ||||| || || || ||||| || | | ||| || || || || Sbjct 43059 AAGGTTCGGCCATCTTCCAACTGTTTTCCGGCAAAAATGAGCCTCTGCTGGTCTGGAGGG 43118 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || |||||||| || |||||| | || | ||||| || | || || Sbjct 43119 ATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAACC 43178 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | |||||||| || | || || ||||| |||||||| Sbjct 43179 TCCAAAGTAATTGTTTTGCCTGTAAGGGTCTTCACAAAAATCTGCAT 43225 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || ||||| | |||||| ||||| || || || || ||||| || || | ||| || || Sbjct 42099 CGCAAAACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCA 42158 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||||||||| || ||||| ||||| | ||| ||||| || || || || || || Sbjct 42159 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 42218 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || || ||||| || ||| | || | ||||| || |||| || || | || | Sbjct 42219 TCCTGTATTTTGGCCTTGACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTAATG 42278 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || || || ||||| || ||||| Sbjct 42279 GTCTTTCCAGTCAAGGTCTTCACAAAGATTTGCAT 42313 >seq37 Length=1182629 Score = 129 bits (142), Expect = 5e-25 Identities = 166/228 (73%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || ||||| | || | |||||||||||| || || || ||||||||||| || Sbjct 291941 CCACCCCTCAAACGCAGCACAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCCGCA 292000 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTA-CCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 | || || |||| ||||| || ||| || ||||| ||||| | ||| ||||| || || Sbjct 292001 AGGGTCCTTCCATCTTCCAACTGTTTATCCAGCAAAGATCAACCTCTGCTGATCTGGGGG 292060 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||| || || ||||| || || || || ||| | || | ||||| || ||||||| Sbjct 292061 AATACCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTCCAC 292120 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | || | || || ||||| ||||| || |||||||| ||||| Sbjct 292121 CTCCAAGGTTATGGTCTTTCCGGTCAAAGTCTTCACAAATATTTGCAT 292168 >seq1039 Length=240209 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||||| || || ||||| || || || ||||| || | |||||| | Sbjct 129087 ACGCAACACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCC 129146 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | || || || ||||| ||||| | ||| ||||| || ||||| |||||||| Sbjct 129147 ATCTTCGAGCTGTTTTCCCGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCTTCTTT 129206 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||| || || || ||| | |||| |||||||| | || || ||||| |||| Sbjct 129207 ATCTTGTATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCTACCTCAAGGGTGAT 129266 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || ||||| |||||||| Sbjct 129267 GGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 129302 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| || || || || ||||| ||||||||||| || | || | | || ||| Sbjct 129322 ACCAAATGGAGCGTGGACTCCTTTTGGATATTGTAATCAGCAAGGGTACGCCCGTCCTCC 129381 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||| |||||| || || || || || ||||| ||||||||| Sbjct 129382 AGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCTTGA 129441 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | |||| || || || | || ||||| ||||||| || ||| Sbjct 129442 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 129501 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || || || || ||||| Sbjct 129502 CCGGTGAGGGTCTTAACGAAGATTTGCAT 129530 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || ||||| | ||||| ||||| || || || || ||||| || || | || || || Sbjct 128632 CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCA 128691 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||||||||| || ||||| ||||| | ||| ||||| || || || || || || Sbjct 128692 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 128751 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 ||||| |||||| || ||| | || | || || || |||| || || | || | Sbjct 128752 TCTTGTATTTTTGCCTTGACATTATCGATCGTATCTGAACTTTCTACCTCCAATGTAATG 128811 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || ||||| || ||||| |||||||| Sbjct 128812 GTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 128846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396145951870368