Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq2319 416 3e-111 seq432 255 7e-63 seq200 145 9e-30 seq1296 141 1e-28 seq318 118 1e-21 seq2286 102 9e-17 seq814 102 9e-17 seq5156 98.7 1e-15 seq2312 98.7 1e-15 seq145 98.7 1e-15 seq1868 95.1 1e-14 seq686 95.1 1e-14 seq1196 93.3 5e-14 seq3832 91.5 2e-13 seq1943 91.5 2e-13 seq1318 91.5 2e-13 seq260 89.7 6e-13 seq2162 86.0 7e-12 >seq2319 Length=57875 Score = 416 bits (460), Expect = 3e-111 Identities = 448/593 (76%), Gaps = 0/593 (0%) Strand=Plus/Minus Query 166168 CCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCT 166227 ||||| || ||||| | |||||| ||| | | || || | ||||| || || || || Sbjct 18582 CCAGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATTGGTCAGGGAAGCTTTTCA 18523 Query 166228 GATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAG 166287 |||| ||||| || |||||||| || || ||||||| ||| | || || || |||||| Sbjct 18522 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAG 18463 Query 166288 CACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGT 166347 || |||||||| |||||||| || || ||| | || || ||||| ||||| || ||| Sbjct 18462 CATAATATTCTTATGCATCCGTTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCC 18403 Query 166348 TTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAA 166407 | || |||||||||||||| ||||| |||||| | | | || || || || ||| Sbjct 18402 CTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAA 18343 Query 166408 ACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTA 166467 | ||||| || | ||||||| ||||| ||||| |||||||| || || || ||| Sbjct 18342 AATGAATCTGCGAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTA 18283 Query 166468 GCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGC 166527 || ||||||||||| || || || |||||||||||||||||| ||||||||||| || Sbjct 18282 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATACGCTAGTTTCAACAACTCTCGT 18223 Query 166528 TCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGC 166587 || || || |||||||| ||||| |||||||| || || |||||||| ||||| | || Sbjct 18222 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 18163 Query 166588 GTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGT 166647 || || ||||| ||||| | || || || || || ||||| ||| || ||||| | Sbjct 18162 ATCAGTACTATGGCTTTCAATTTAAATGGATTTAATTTTAACCAATCCGTCGTTGATTCT 18103 Query 166648 CAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAA 166707 || |||||||| | ||||||||||| ||| || ||||||| ||| || ||||||||| Sbjct 18102 CAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAA 18043 Query 166708 GTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGCTGCTGCTGA 166760 ||||||||||| |||||||| || || ||||| || ||||| ||||| | ||| Sbjct 18042 GTTATGCATGAACGTAACGCTCATAATTTCCCTCTAGACCTAGCTGCGGTTGA 17990 >seq432 Length=331984 Score = 255 bits (282), Expect = 7e-63 Identities = 373/525 (71%), Gaps = 2/525 (0%) Strand=Plus/Plus Query 167230 CATTCTTTACTTCTTCTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAA 167289 |||||||| | | || |||||||||||| | || || ||||| | | ||| ||| Sbjct 47490 CATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAGGGAGATTTTACCCGTTGGTGTCAA 47549 Query 167290 CTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATG 167349 | || || || ||| ||||||| || || ||||| || || | | || ||||| ||| Sbjct 47550 TTAGGTGGTCTGTGGACTTTTGTTGCTCTTCACGGTGCTTTCGGATTAATAGGTTTTATG 47609 Query 167350 CTTCGACAGTTTGAACTTGCTCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTT 167408 | || || |||||||||||||| ||| | | | || || || ||||| || || || Sbjct 47610 TTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGGCCTTATAATGCAATCGCATT 47668 Query 167409 CTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAG 167468 ||| ||||| |||||||| || ||| || |||||| | ||||| || ||||| | Sbjct 47669 CTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGTCAGTCTGG 47728 Query 167469 CTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCA 167528 ||||||||||| || || || || || || || || |||||| | ||||| |||| Sbjct 47729 TTGGTTCTTTGCACCTAGTTTTGGTGTAGCAGCTATATTTCGATTCATTCTCTTTTTCCA 47788 Query 167529 AGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGG 167588 ||| || || || |||||| | || ||||||||||||||||| || || ||| | |||| Sbjct 47789 AGGGTTTCATAATTGGACATTAAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGG 47848 Query 167589 TGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGG 167648 | || | | | || || ||||| | ||| ||||| ||||| || | ||||||||| Sbjct 47849 CGCCGCCCTATTATGCGCTATTCATGGCGCTACCGTAGAAAATACCTTATTTGAAGATGG 47908 Query 167649 TGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAAT 167708 || ||||| || || || || | | || || | ||||| ||||||||||| Sbjct 47909 GGATGGTGCAAATACATTCCGTGCTTTTAACCCAACCCAAGCGGAAGAAACTTATTCAAT 47968 Query 167709 GGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTT 167753 ||| || || ||||| || ||||| || ||||| || ||||||| Sbjct 47969 GGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTT 48013 >seq200 Length=959787 Score = 145 bits (160), Expect = 9e-30 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 167833 GGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAG 167892 |||||||| || || || ||||| || || |||||||||||||| ||| | || ||||| Sbjct 265338 GGTCTGGCCCTGAACCTACGTGCCTATGACTTCGTTTCTCAAGAAATCCGCGCAGCGGAA 265279 Query 167893 GATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCA 167952 ||||| || ||||| |||||||| || ||||| || || | || |||||| |||| || Sbjct 265278 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCG 265219 Query 167953 TGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCA 168012 ||| | || || ||||| |||||||| ||| || | ||||| ||||| ||||| ||| Sbjct 265218 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 265159 Query 168013 CGAGG 168017 || || Sbjct 265158 CGTGG 265154 >seq1296 Length=110557 Score = 141 bits (156), Expect = 1e-28 Identities = 171/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 166222 TTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGTCTTCCAA 166281 || || |||| ||||| || |||||||| || || ||||||| ||| | || || || Sbjct 75580 TTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAG 75521 Query 166282 GCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGT 166341 |||||||| |||||||| |||||||| || || ||| | || || ||||| ||||| || Sbjct 75520 GCTGAGCATAATATTCTTATGCATCCGTTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 75461 Query 166342 GGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACG 166401 ||| | || |||||||||||||| ||||| |||||| | | | || || || Sbjct 75460 GGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACT 75401 Query 166402 ACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAAC 166454 || |||| ||||| || | ||||||| ||||| ||||| |||||||| Sbjct 75400 ACAGAAAATGAATCTGCGAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 75348 >seq318 Length=400206 Score = 118 bits (130), Expect = 1e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 166538 TCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGA 166597 ||||| | ||||| || ||||| || || |||||||| | || | || || || Sbjct 349093 TCTTCTTAGCTGCTTGACCTGTAGTAGGTATCTGGTTTATCGTGTTAGGTATCAGTACTG 349152 Query 166598 TGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTG 166657 |||| ||||| | || | || || || ||||| ||| || ||||| ||| ||||||| Sbjct 349153 TGGCTTTCAATTTAAATTGATTTAATTTTAACCAATCCGTCGTTGATTCTCAAGGTCGTG 349212 Query 166658 TGTTGAACACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATG 166717 | | ||||| ||||| ||| | ||||||| ||| || |||||||||||||||||| Sbjct 349213 TAATTAACACTTGGGCTGATACTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATA 349272 Query 166718 AGCGTAACGCACACAACTTCCCCCTCGACCTCGCTGCTGCTGA 166760 | |||||| | || || || || | || || ||||| | ||| Sbjct 349273 AACGTAACACTCATAATTTTCCTCCAGAGCTAGCTGCGGTTGA 349315 >seq2286 Length=21248 Score = 102 bits (112), Expect = 9e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| |||||||||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 6804 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 6745 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGG 167811 || ||| ||||| ||| | ||||||||||||||||| || || || | ||| | ||| Sbjct 6744 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTCCCAGTAACGGGTTTATGG 6685 Query 167812 A 167812 | Sbjct 6684 A 6684 >seq814 Length=198837 Score = 102 bits (112), Expect = 9e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| |||||||||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 115068 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 115127 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGG 167811 || ||| ||||| ||| | ||||||||||||||||| || || || | ||| | ||| Sbjct 115128 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTCCCAGTAACGGGTTTATGG 115187 Query 167812 A 167812 | Sbjct 115188 A 115188 >seq5156 Length=1562 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| ||||||||| |||| || || ||||| || ||||| || |||||||| ||||| Sbjct 912 GAAGAAACTTATTCAGTGGTCACCGCTAACCGCTTATGGTCCCAAATCTTCGGGGTTGCT 853 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCC 167795 || ||| ||||| ||| | ||||||||||||||||| || || Sbjct 852 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTCCC 809 >seq2312 Length=20438 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| |||||||||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 19752 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 19693 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798 || ||| ||||| ||| | ||||||||||||||||| || || || Sbjct 19692 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTCCCAGT 19646 >seq145 Length=649883 Score = 98.7 bits (108), Expect = 1e-15 Identities = 124/169 (73%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 166096 TACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTT 166155 |||||||||||| |||||||||| || ||| | |||||||| || ||||| |||| Sbjct 132355 TACATGGGTCGTAAGTGGGAACTAAGTTTTCGTTTGGGTATGCGCCCTTGGATTGCTGTT 132296 Query 166156 GCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCAA 166215 || || ||||| ||||| || |||| ||| | ||| || | ||||| | ||||| Sbjct 132295 GCATATTCAGCTCCAGTTACTACTGC-AGT----TTTTCTTAATCTATCCAATTGGTCAG 132241 Query 166216 GGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACT 166264 || || || | |||| ||||| || |||||||| | || ||||||| Sbjct 132240 GGAAGCTTTTTAGATGGTATGCCTCTGGGAATCTCTAGTACTTTCAACT 132192 >seq1868 Length=44937 Score = 95.1 bits (104), Expect = 1e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| |||||||||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 39548 GAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTT-GGGGTTGCT 39606 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798 || ||| ||||| ||| | ||||||||||||||||| || || || Sbjct 39607 TTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTCCCAGT 39653 >seq686 Length=409839 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| |||||||||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 52881 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 52940 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798 || ||| ||||| ||| | ||||| ||||||||||| || || || Sbjct 52941 TTTTCCAATAAACGTTGGTTACATTTGTTTATGTTATTTGTCCCAGT 52987 >seq1196 Length=183224 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 ||||| |||||||||||||| || || ||||| || ||||| || ||||| || ||||| Sbjct 19709 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 19650 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGT 167792 || ||| ||| | ||| | ||||||||||||||||| || Sbjct 19649 TTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGT 19609 >seq3832 Length=2369 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| ||||||||||||||||| ||| Sbjct 2243 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAAT 2302 Query 18188 CCTACCTGGGGAG 18200 |||| ||||||| Sbjct 2303 CCTATTTGGGGAG 2315 >seq1943 Length=39883 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| ||||||||||||||||| ||| Sbjct 35164 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACCGATTGGTCGTAGGTTCGAAT 35105 Query 18188 CCTACCTGGGGAG 18200 |||| ||||||| Sbjct 35104 CCTATTTGGGGAG 35092 >seq1318 Length=107216 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||||||| Sbjct 45112 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 45053 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 45052 CCTACTTGGGGAG 45040 >seq260 Length=818471 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||||||||||| || |||||||| |||||||| Sbjct 234372 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGACTGTTAACTGACTGGTCGTATGTTCAAAT 234313 Query 18188 CCTACCTGGGGA 18199 ||||| |||||| Sbjct 234312 CCTACTTGGGGA 234301 >seq2162 Length=26882 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 167692 GAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCT 167751 || || ||||||||| |||| || || ||||| || ||||| || ||||| || ||||| Sbjct 20885 GAGGAAACTTATTCATTGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCT 20944 Query 167752 TTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798 || ||| ||| | ||| | ||||||||||||||||| || || || Sbjct 20945 TTTTCCAATAAATGTTGGTTACATTTCTTTATGTTATTTGTCCCAGT 20991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561055604185600