Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq2319 361 6e-95 seq432 320 2e-82 seq219 158 1e-33 seq1296 150 2e-31 seq2286 122 1e-22 seq1196 122 1e-22 seq485 120 3e-22 seq2312 118 1e-21 seq814 118 1e-21 seq686 113 5e-20 seq1868 111 2e-19 seq5156 109 6e-19 seq2162 109 6e-19 seq264 91.5 2e-13 seq3832 89.7 6e-13 seq1943 89.7 6e-13 seq1318 89.7 6e-13 seq260 87.8 2e-12 seq318 82.4 9e-11 seq237 82.4 9e-11 >seq2319 Length=57875 Score = 361 bits (400), Expect = 6e-95 Identities = 436/593 (74%), Gaps = 0/593 (0%) Strand=Plus/Plus Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893 ||| | ||||| ||||| |||||||| || || |||||||| |||||||||||||||||| Sbjct 17990 TCAACCGCAGCTAGGTCTAGAGGGAAATTATGAGCGTTACGTTCATGCATAACTTCCATA 18049 Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCA 67953 || | ||| ||||| | || || |||||||| | || ||| | |||| Sbjct 18050 CCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGAGAATCA 18109 Query 67954 AGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGT 68013 | || || ||||| || || || ||||| | ||||| ||||| || || | ||| | Sbjct 18110 ACGACGGATTGGTTAAAATTAAATCCATTTAAATTGAAAGCCATAGTACTGATACCTAAC 18169 Query 68014 GCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAG 68073 || || ||||||||||| || |||||||| ||||| |||||||| || | ||||| ||| Sbjct 18170 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAG 18229 Query 68074 TTGTTGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATG 68133 |||||||| || || |||||||||| || || || || ||||| ||||| ||||| Sbjct 18230 TTGTTGAAACTAGCGTATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATA 18289 Query 68134 TTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTG 68193 || || || ||||| ||||||||||| ||||||| | ||| || ||| |||| || Sbjct 18290 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTCGCAGATTCATTTTCTGTA 18349 Query 68194 GTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCA 68253 ||||| | | || |||||| |||| |||||| ||||| |||||||| || || || Sbjct 18350 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCG 18409 Query 68254 CCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 68313 || ||||| ||||| || || | ||| || || || ||||| || || || ||||| || Sbjct 18410 CCGAATACACCAGCTACACCTAACATGTGAAACGGATGCATAAGAATATTATGCTCAGCC 18469 Query 68314 TGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAAC 68373 || || || | ||| |||||||||||||||| || || |||||||| | || || || Sbjct 18470 TGAAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAG 18529 Query 68374 GAACCTTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGG 68426 || ||||| | || |||| || ||| ||||| | || |||||||| || Sbjct 18530 CTTCCCTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCAACTGG 18582 >seq432 Length=331984 Score = 320 bits (354), Expect = 2e-82 Identities = 393/534 (74%), Gaps = 2/534 (0%) Strand=Plus/Minus Query 66855 TTATTGCTAAACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAG 66914 |||||| ||| |||| |||||||| || ||||| |||||||| || || |||||||| Sbjct 48022 TTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAA 47963 Query 66915 TAAGTTTCTTCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGTTCACCATCT 66974 |||||||||||| |||| || | || || || ||| || ||||| || |||||| Sbjct 47962 TAAGTTTCTTCCGCTTGGGTTGGGTTAAAAGCACGGAATGTATTTGCACCATCCCCATCT 47903 Query 66975 TCATACAGAGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCACCACCCAGG 67034 ||| | | ||||| ||||| ||| | |||||||| || | | | || | |||| Sbjct 47902 TCAAATAAGGTATTTTCTACGGTAGCGCCATGAATAGCGCATAATAGGGCGGCGCCCAAT 47843 Query 67035 ATACCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGG 67094 | ||| || || |||||||||||||| ||||| || ||||| ||||| || ||||| | Sbjct 47842 ACACCAGCAACTCCCATCATATGAAATGGGTTTAATGTCCAATTATGAAACCCTTGGAAA 47783 Query 67095 AAGAGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAACCAACTCGAT 67154 ||||||| ||||||||| || |||| || || ||| || || || ||||||| || Sbjct 47782 AAGAGAATGAATCGAAATATAGCTGCTACACCAAAACTAGGTGCAAAGAACCAACCAGAC 47723 Query 67155 TGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGACCAGAGAACGCA 67214 |||||||| || || || || || ||| |||||||||||| || ||||| ||||| || Sbjct 47722 TGACCCAGTGGATAAATAAGGAATACAGAAACAAAAACAGCAATTGGACCGGAGAATGCG 47663 Query 67215 ATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAAGCATGAA 67273 || ||||| || || || | | || ||| || || |||||||| || || | ||| || Sbjct 47662 ATTGCATTATAAGGCCGCA-ATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATAAA 47604 Query 67274 ACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAAGTTGGAT 67333 ||| |||| ||||||| ||||| || || |||||| |||| || || || | ||| Sbjct 47603 ACCTATTAATCCGAAAGCACCGTGAAGAGCAACAAAAGTCCACAGACCACCTAATTGACA 47544 Query 67334 CCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATG 67387 ||| ||| ||||| ||||| | ||||||||||| |||| | | |||||| Sbjct 47543 CCAACGGGTAAAATCTCCCTGTGCTTCAGGACCCCACAGTAACAACAAAGAATG 47490 >seq219 Length=535087 Score = 158 bits (174), Expect = 1e-33 Identities = 172/223 (77%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 68565 ATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTAGG 68624 ||||| || ||| |||||||| || || |||||||| | |||||| || ||| |||| Sbjct 252062 ATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCAATAGCCGCAGAAGTAGG 252121 Query 68625 AACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCACG 68684 || || ||||| ||||| || ||||| || || || || || |||| |||||| ||||| Sbjct 252122 AATAATGGCACCCGAAATTATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACG 252181 Query 68685 AATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGTTG 68743 ||||||||| || || ||||| || ||||| ||||| |||| || || ||||| |||| Sbjct 252182 AATACCATCAATATCTACAGGAGGGGCAGCAATGAAAGCGATAATAAATACAGA-AGTTG 252240 Query 68744 CTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAA 68785 | | ||| || ||||||||||||| || || ||||| |||| Sbjct 252241 CGGTCAATAAG-GTAGGGATCATCAAAACACCAAACCATCCAA 252282 >seq1296 Length=110557 Score = 150 bits (166), Expect = 2e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 68140 GTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCA 68199 || ||||| ||||||||||| ||||||| | ||| || ||| |||| || ||||| Sbjct 75348 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTCGCAGATTCATTTTCTGTAGTTTCC 75407 Query 68200 CGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAAT 68259 | | || |||||| |||| |||||| ||||| |||||||| || || || || ||| Sbjct 75408 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAAT 75467 Query 68260 ACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAC 68319 || ||||| || || | ||| || || || ||||| || || || ||||| || || || Sbjct 75468 ACACCAGCTACACCTAACATGTGAAACGGATGCATAAGAATATTATGCTCAGCCTGAAAT 75527 Query 68320 ACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCAT 68360 || | ||| |||||||||||||||| || || |||||||| Sbjct 75528 ACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCAT 75568 >seq2286 Length=21248 Score = 122 bits (134), Expect = 1e-22 Identities = 105/130 (81%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | |||| | || || ||||| |||||||||||||| ||||| | |||||| || Sbjct 6684 TCCATAAACCCGTTACTGGGACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAA 6743 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| |||||||| || ||||| |||||||| || || |||||||| |||||||||| Sbjct 6744 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTT 6803 Query 66925 CCTCTTGAGT 66934 || |||| || Sbjct 6804 CCGCTTGGGT 6813 >seq1196 Length=183224 Score = 122 bits (134), Expect = 1e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | |||| | || | ||||| |||||||||||||| ||||| | |||||| || Sbjct 19589 TCCATAAACCCGTTACTCGGACAAATAACATAAAGAAATGTAACCAACATTTATTGGAAA 19648 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| |||||||| || ||||| |||||||| || || |||||||| |||||||||| Sbjct 19649 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTT 19708 Query 66925 CCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGC 66961 || |||| || | || || || ||| || ||||| Sbjct 19709 CCGCTTGGGTTGGGTTAAAAGCACGGAATGTATTTGC 19745 >seq485 Length=309328 Score = 120 bits (132), Expect = 3e-22 Identities = 106/131 (81%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 66585 TATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGT 66644 |||||||| | || ||||| || ||||| || || ||||||| || ||||||||| || Sbjct 82890 TATTAAAGAGTGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGC 82831 Query 66645 TGATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAG 66704 ||||| |||| |||| ||||||||||| |||||| || || ||||| || ||||||||| Sbjct 82830 TGATCTATAGTCGCCATCCATGCACGAATACCTTCGTTTAAGAGAATATT-TTTGTGTAG 82772 Query 66705 AACGTCTCGAA 66715 || ||||| || Sbjct 82771 AAAGTCTCAAA 82761 >seq2312 Length=20438 Score = 118 bits (130), Expect = 1e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | ||| | || || ||||| |||||||||||||| ||||| | |||||| || Sbjct 19632 TCCATAAACCTGTTACTGGGACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAA 19691 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| |||||||| || ||||| |||||||| || || |||||||| |||||||||| Sbjct 19692 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTT 19751 Query 66925 CCTCTTGAGT 66934 || |||| || Sbjct 19752 CCGCTTGGGT 19761 >seq814 Length=198837 Score = 118 bits (130), Expect = 1e-21 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | |||| | || || ||||| |||||||||||||| ||||| | |||||| || Sbjct 115188 TCCATAAACCCGTTACTGGGACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAA 115129 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| |||||||| || ||||| |||||||| || || |||||||| |||||||||| Sbjct 115128 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTT 115069 Query 66925 CCTCTTGAGT 66934 || ||| || Sbjct 115068 CCGTTTGGGT 115059 >seq686 Length=409839 Score = 113 bits (124), Expect = 5e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | || | | || || ||||| |||||||| ||||| ||||| | |||||| || Sbjct 53001 TCCATAAACTCGTTACTGGGACAAATAACATAAACAAATGTAACCAACGTTTATTGGAAA 52942 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| |||||||| || ||||| |||||||| || || |||||||| |||||||||| Sbjct 52941 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTT 52882 Query 66925 CCTCTTGAGT 66934 || |||| || Sbjct 52881 CCACTTGGGT 52872 >seq1868 Length=44937 Score = 111 bits (122), Expect = 2e-19 Identities = 95/116 (82%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 66819 ACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAG 66878 || || ||||| |||||||||||||| ||||| | |||||| ||| |||| |||| | Sbjct 39653 ACTGGGACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAA-G 39595 Query 66879 ATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGT 66934 || || ||||| |||||||| ||||| |||||||| |||||||||||| |||| || Sbjct 39594 ATTTGGGACCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCCGCTTGGGT 39539 >seq5156 Length=1562 Score = 109 bits (120), Expect = 6e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | |||| | | || ||||| |||||||||||||| ||||| | |||||| || Sbjct 792 TCCATAAACCCGTTATTGGGACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAA 851 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| || ||||| || ||||| |||||||| || || |||| ||| |||||||||| Sbjct 852 AAGCAACCCCGAAGATTTGGGACCATAAGCGGTTAGCGGTGACCACTGAATAAGTTTCTT 911 Query 66925 CCTCTTGAGT 66934 || |||| || Sbjct 912 CCGCTTGGGT 921 >seq2162 Length=26882 Score = 109 bits (120), Expect = 6e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | ||| | || || ||||| |||||||||||||| ||||| | |||||| || Sbjct 21005 TCCATAAACCAGTTACTGGGACAAATAACATAAAGAAATGTAACCAACATTTATTGGAAA 20946 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTT 66924 | |||| |||||||| || ||||| |||||||| || || |||| ||| |||||||| | Sbjct 20945 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCAATGAATAAGTTTCCT 20886 Query 66925 CCTCTTGAGT 66934 || |||| || Sbjct 20885 CCGCTTGGGT 20876 >seq264 Length=551193 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68134 TTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTG 68193 || || || ||||| ||||||||||| ||||||| | ||| || ||| |||| || Sbjct 292057 TTTTAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTCGCAGATTCATTTTCTGTA 291998 Query 68194 GTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCA 68253 ||||| | | || |||||| |||| |||||| ||||| |||||||| || || || Sbjct 291997 GTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCG 291938 Query 68254 CCAAATACGCCAGCAACGCC 68273 || ||||| ||||| || || Sbjct 291937 CCGAATACACCAGCTACACC 291918 >seq3832 Length=2369 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| ||||||| ||||||||||||||||| ||||||| ||| ||||| || ||| Sbjct 2315 CTCCCCAAATAGGATTCGAACCTACGACCAATCGGTTAACAGCCGACCGCTCTACCACTG 2256 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 2255 AGCTACTGAGGA 2244 >seq1943 Length=39883 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| ||||||| ||||||||||||||||| ||||||| ||| ||||| || ||| Sbjct 35092 CTCCCCAAATAGGATTCGAACCTACGACCAATCGGTTAACAGCCGACCGCTCTACCACTG 35151 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 35152 AGCTACTGAGGA 35163 >seq1318 Length=107216 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||||||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 45040 CTCCCCAAGTAGGATTTGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 45099 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 45100 AGCTACTGAGGA 45111 >seq260 Length=818471 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 35512 TCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTGA 35571 |||||| ||||||||||||| |||||||| || ||||||||||| ||||| || |||| Sbjct 234301 TCCCCAAGTAGGATTTGAACATACGACCAGTCAGTTAACAGTCGACCGCTCTACCACTGA 234360 Query 35572 GCTACTGAGGA 35582 ||||||||||| Sbjct 234361 GCTACTGAGGA 234371 >seq318 Length=400206 Score = 82.4 bits (90), Expect = 9e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893 ||| | ||||| || || |||| || || || | |||||| | |||||||||||||||| Sbjct 349315 TCAACCGCAGCTAGCTCTGGAGGAAAATTATGAGTGTTACGTTTATGCATAACTTCCATA 349256 Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCA 67953 || | ||| ||||| | | || ||||| || | || ||| | |||| Sbjct 349255 CCAAGGTTAGCACGGTTAATAGTATCAGCCCAAGTGTTAATTACACGACCTTGAGAATCA 349196 Query 67954 AGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGT 68013 | || || ||||| || || || | ||| | ||||| |||| || || | ||| | Sbjct 349195 ACGACGGATTGGTTAAAATTAAATCAATTTAAATTGAAAGCCACAGTACTGATACCTAAC 349136 Query 68014 GCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGA 68056 | | ||||||||||| || ||||| || ||||| | ||||| Sbjct 349135 ACGATAAACCAGATACCTACTACAGGTCAAGCAGCTAAGAAGA 349093 >seq237 Length=511443 Score = 82.4 bits (90), Expect = 9e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 66805 TCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAA 66864 |||| | ||| | || || ||||| |||||||||||||| ||||| | |||||| || Sbjct 121988 TCCATAAACCAGTTACCGGGACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAA 122047 Query 66865 ACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGT 66904 | |||| |||||||| || ||||| |||||||| || || Sbjct 122048 AAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGT 122087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571858299751680