Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq933 141 2e-28 seq322 141 2e-28 seq1436 136 7e-27 seq1740 113 8e-20 seq23 111 3e-19 seq78 107 3e-18 seq276 102 1e-16 seq1642 100 5e-16 seq1039 100 5e-16 seq37 89.7 9e-13 >seq933 Length=173040 Score = 141 bits (156), Expect = 2e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||||||||| ||| |||| ||| | |||| || || || || Sbjct 29705 AATTTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTT 29646 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || ||||| ||| || | ||| || || ||||| || | ||||| || Sbjct 29645 GTAATCAGCTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTG 29586 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| ||||| || || |||| ||| | ||| ||||||||| || Sbjct 29585 ATCGGGAGGGATACCTTCCTTATCCTGAATCTTGGCTTTCACATTATCAATAGTATCTGA 29526 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | |||||| |||| ||| ||||| || ||||||| || || ||||| || |||||| Sbjct 29525 ACTCTCAACCTCTAAAGTAATAGTCTTCCCTGTTAAAGTCTTCACAAAAATCTGCATT 29468 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| ||| |||| ||| | |||| || || || || || || Sbjct 29470 ATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCA 29411 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | ||| || || ||||| || | ||||| ||||||||| Sbjct 29410 GCTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGA 29351 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| || || || |||| || | ||| ||| |||||||| || ||| Sbjct 29350 GGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCGGAGGATTCA 29291 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || | || || || ||||| ||||| Sbjct 29290 ACCTCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCAT 29241 Score = 111 bits (122), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||||| |||| || || |||||||| || | | || | | ||| || Sbjct 30133 ACCAAGTGCAAAGTAGATTCCTTCTGGATATTATAATCAGCCAGAGTACGACCATCTTCC 30074 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 || || || ||||||||||||| ||||| || || ||||| || || |||||||| || Sbjct 30073 AACTGCTTCCCGGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATACCCTCTTTATCCTGA 30014 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||| | || | ||| ||| ||||||||| |||||| || | ||||| || || Sbjct 30013 ATTTTTGCCTTCACATTGTCAATTGTATCGGAACTCTCAACCTCCAATGTTATGGTCTTT 29954 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| |||||||| Sbjct 29953 CCAGTAAGGGTCTTAACAAAAATTTGCAT 29925 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || || || | |||| ||||| |||||| || || | || || | | | Sbjct 30367 CGAAGAACAAGGTGGAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCA 30308 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || ||||||||||| | ||||| || || || || || || || ||| Sbjct 30307 TCCTCCAACTGCTTACCGGCAAAAATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTA 30248 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | ||| || ||||| || || || || | || ||| Sbjct 30247 TCTTGAATCTTTGCTTTCACATTATCGATTGTATCAGAGCTTTCCACCTCCAAGGTAATA 30188 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || |||||||||||||| Sbjct 30187 GTCTTCCCAGTAAGGGTCTTCACAAATATTTGCAT 30153 >seq322 Length=397916 Score = 141 bits (156), Expect = 2e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||||||||| |||||||| ||| | |||| || || || || Sbjct 312065 AATTTGCATTCCACCTCTCAATCTAAGTACCAAATGAAGGGTAGATTCCTTCTGTATGTT 312124 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || ||||| ||| || | ||||| || ||||| || | ||||| || Sbjct 312125 GTAATCAGCTAGGGTTCTTCCATCCTCAAGCTGTTTCCCTGCAAAGATAAGCCTCTGCTG 312184 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||| |||||||| || || || | ||| | ||| |||||||| || Sbjct 312185 ATCTGGAGGGATTCCCTCTTTATCCTGAATCTTAGCTTTCACATTATCGATAGTATCTGA 312244 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | |||||| || | ||| |||||||| ||||| | || || ||||| ||||||||| Sbjct 312245 ACTCTCAACCTCCAAAGTAATAGTTTTTCCTGTCAAAGTCTTAACAAAAATTTGCATT 312302 Score = 141 bits (156), Expect = 2e-28 Identities = 174/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || ||||||||||||| ||| |||| ||| | |||| || || || || Sbjct 312293 AATTTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGTATGTT 312352 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | || ||||| ||| || | |||||| || ||||| || | ||||| || Sbjct 312353 GTAATCTGCTAGGGTTCTTCCATCCTCAAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTG 312412 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| |||||||| ||||| || || || | ||| | ||| |||||||| || Sbjct 312413 ATCTGGAGGGATTCCTTCCTTATCCTGAATCTTAGCTTTCACATTATCGATAGTATCTGA 312472 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | |||||| |||| ||| ||||| || ||||||| || || ||||| || |||||| Sbjct 312473 ACTCTCAACCTCTAAAGTAATAGTCTTTCCTGTTAAAGTCTTCACAAAAATCTGCATT 312530 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| ||| |||| ||| | |||| || || || || || || Sbjct 312528 ATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCA 312587 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | ||| || || ||||| || | ||||| ||||||||| Sbjct 312588 GCTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGA 312647 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| || || || |||| || | ||| ||| |||||||| || ||| Sbjct 312648 GGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCGGAGGATTCA 312707 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || | || || || ||||| ||||| Sbjct 312708 ACCTCAAGGGTGATGGTTTTTCCAGTCAAGGTCTTAACGAATATCTGCAT 312757 Score = 114 bits (126), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || || || || ||||||||||||| ||||| || || ||||| || || ||||| Sbjct 311690 ATCTTCCAACTGCTTCCCGGCAAAAATTAGCCTCTGCTGGTCTGGAGGAATACCCTCTTT 311749 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 |||||| || || | ||| | ||| |||||| |||||| |||||| || | |||||| Sbjct 311750 ATCTTGAATCTTTGCTTTCACATTGTCAATAGTGTCGGAACTCTCAACCTCCAAAGTTAT 311809 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| |||||||| Sbjct 311810 GGTCTTTCCAGTAAGGGTCTTAACAAAAATTTGCAT 311845 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 |||||||| || | | || | | ||| || || || || ||||||||||||| ||| Sbjct 333228 ATATTATAATCAGCCAGAGTACAACCATCTTCCAACTGCTTGCCGGCAAAAATTAGCCTC 333287 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || || |||| || || |||||||| || ||||| | ||| | ||| ||||||| Sbjct 333288 TGCTGGTCCAGAGGAATACCCTCTTTATCCTGAATTTTTGCTTTCACATTGTCAATAGTA 333347 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||| || |||||| || | |||||| || || || || || || || ||||| |||||| Sbjct 333348 TCGAAACTCTCAACCTCCAAAGTTATGGTCTTTCCAGTAAGGGTCTTAACAAAAATTTGC 333407 Query 193359 AT 193360 || Sbjct 333408 AT 333409 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| ||| |||| ||| | |||| || || || || || || Sbjct 333637 ATTCCACCTCTCAATCTAAGAACCAAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCA 333696 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | ||| || || ||||| || | | ||| ||||||||| Sbjct 333697 GCTAGGGTTCTTCCATCCTCAAGTTGCTTCCCTGCAAAGATAAGCCACTGCTGATCAGGA 333756 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| || || || |||| || | ||| ||| ||||| || || ||| Sbjct 333757 GGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATTGTATCTGAGGATTCA 333816 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||| |||| || || | || || || ||||| ||||| Sbjct 333817 ACCTCAAGGGTGATAATTTTGCCAGTCAAGGTCTTAACGAATATCTGCAT 333866 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| |||||||| || | || || |||||||| || || ||||| || Sbjct 312830 ATCTTCTAATTGTTTACCGGCAAAGATAAGCCTTTGCTGATCAGGTGGAATCCCTTCCTT 312889 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || || | ||| | ||| || ||||| ||| ||| || || || || || Sbjct 312890 GTCTTGGATCTTAGCTTTAACATTGTCTATGGTATCAGAAATCTCCACCTCAAGGGTGAT 312949 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || | ||||| || || |||||||| Sbjct 312950 GGTTTTACCGGTCAATGTTTTCACGAAAATTTGCAT 312985 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||||||||| ||||| || || | || || |||||||| || || ||||| || Sbjct 333939 ATCTTCTAATTGTTTACCGGCGAAGATAAGCCTTTGCTGATCAGGTGGAATCCCTTCCTT 333998 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || || | ||| | || || ||||| ||| ||| | || || || || Sbjct 333999 GTCTTGGATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCCGCCTCAAGGGTGAT 334058 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| | | ||||| || || |||||||| Sbjct 334059 GGTTTTACCCATCAATGTTTTCACGAAAATTTGCAT 334094 >seq1436 Length=88924 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | ||| | ||| |||| ||| | |||| |||||| |||||||| || Sbjct 7035 ATTCCACCACGCAACCTAAGAACCAAATGAAGCGTAGACTCTTTCTGGATATTATAATCC 7094 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || ||||| || || ||||| || |||| ||| ||||||||| Sbjct 7095 GCAAGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGA 7154 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||||||||| || || || | || | || || || || || || ||| Sbjct 7155 GGAATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCAGAGGATTCA 7214 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| || ||||| ||||| || || |||||||| Sbjct 7215 ACTTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACGAAGATTTGCAT 7264 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || | ||| ||||| || | ||| | || | |||||| |||||||| || Sbjct 38762 ATCCCTCCACGCAACCGAAGCACTAAATGAAGCGTGGACTCTTTCTGGATATTATAATCC 38821 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || ||||| || || ||||| || |||| ||| ||||||||| Sbjct 38822 GCAAGAGTTCTCCCATCTTCCAATTGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGA 38881 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||||||||| || || || | || | || || || ||||| || ||| Sbjct 38882 GGGATTCCTTCTTTATCCTGAATCTTCGCCTTCACGTTGTCGATTGTGTCGGAGGATTCA 38941 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 38942 ACTTCGAGTGTGATGGTTTTTCCAGTTAGGGTTTTGACAAAGATTTGCAT 38991 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||| || || | | ||| || ||||| || |||||||| || Sbjct 7338 TCTTCAAGTTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTG 7397 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | || || || || || || || || ||||| ||||| Sbjct 7398 TCTTGGATTTTGGCTTTGACGTTGTCGATGGTGTCAGAGGATTCTACCTCTAGGGTTATG 7457 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| ||||| ||||| || ||||| Sbjct 7458 GTTTTGCCGGTTAGGGTTTTCACAAAGATCTGCAT 7492 Score = 96.9 bits (106), Expect = 6e-15 Identities = 115/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||| || || | | |||||| || || || |||||||| || Sbjct 39065 TCTTCGAGTTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTG 39124 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | || || || ||||| || || || ||||| ||||| Sbjct 39125 TCTTGGATTTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATG 39184 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || | ||| ||||| || || || ||||| Sbjct 39185 GTTTTGCC-GGTAGGGTTTTCACGAAGATCTGCAT 39218 >seq1740 Length=56962 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| || ||||| ||||| || ||||| | || | || || || || || ||| Sbjct 42996 ATACCGCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCG 43055 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || |||| ||| || || ||||||||||||||||| | ||||| || || ||| Sbjct 43056 GCCAAGGTTCGGCCATCTTCCAACTGTTTTCCGGCAAAAATGAGCCTCTGCTGGTCTGGA 43115 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| || || | |||| ||| ||| || || || |||| Sbjct 43116 GGGATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCA 43175 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || ||||| ||||| || || || ||||| || ||||| Sbjct 43176 ACCTCCAAAGTAATTGTTTTGCCTGTAAGGGTCTTCACAAAAATCTGCAT 43225 Score = 93.3 bits (102), Expect = 8e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || || ||||| ||||| || ||||| | || | || || || || Sbjct 22128 ATTTGCATGCCTCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTG 22069 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || | || || | ||| || || ||||| ||||||||||| || || |||||| Sbjct 22068 TAATCAGCCAAGGTCCGGCCATCTTCCAACTGTTTCCCGGCAAAAATCAACCTTTGTTGA 22009 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || || || || || || || | || | ||| |||||| || || Sbjct 22008 TCTGGGGGAATACCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATAGTGTCTGAG 21949 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| || | |||||| || || || || || || || ||||| || ||||| Sbjct 21948 CTCTCAACCTCCAAAGTTATTGTCTTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 21893 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 ||||| ||| || | || ||||| |||||||| | ||||| || || ||||| || Sbjct 42606 GTTCTGCCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGAGGGATA 42665 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 || ||||| || ||||| || | || | ||| ||| || || || ||| || || Sbjct 42666 CCCTCTTTGTCCTGTATCTTAGCCTTCAGATTGTCAATTGTGTCTGAGCTCTCCACCTCA 42725 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || ||||||||||| | || || ||||| |||||||| Sbjct 42726 ATAGTAATGGTTTTACCTGTCAATGTCTTCACAAAGATTTGCAT 42769 >seq23 Length=202804 Score = 111 bits (122), Expect = 3e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | |||||||||||| || || | | |||||||| || || |||||||| || Sbjct 5415 ATCTTCGAGTTGTTTTCCGGCGAAGATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTT 5356 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| ||||||| ||| | || || || ||||| || || || ||||| ||||| Sbjct 5355 GTCTTGAATTTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTAT 5296 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || ||||| ||||| || || |||||||| Sbjct 5295 GGTTTTGCCGGTTAGGGTTTTCACGAAGATTTGCAT 5260 >seq78 Length=963227 Score = 107 bits (118), Expect = 3e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || || | || |||||||| || || |||||||| || ||||| ||| Sbjct 597752 TGTTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATT 597811 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || ||||| ||||| ||||| || || ||||| || ||||| Sbjct 597812 TTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCC 597871 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || || || ||||| || Sbjct 597872 GTTAGGGTTTTGACGAAGATCTGCATCTT 597900 Score = 107 bits (118), Expect = 3e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| ||||| || |||||||| || || | | || || ||||| || |||||||| || Sbjct 604703 ATCTTCTAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTT 604762 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || |||| ||| | ||| || || || ||||||||||| || || ||||| Sbjct 604763 GTCTTGGATCTTGGCTTTGACATTGTCGATTGTGTCAGAAGACTCAACCTCGAGGGTTAT 604822 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || |||||||| ||||| || || || ||||| || Sbjct 604823 CGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 604861 >seq276 Length=436033 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || || | || |||||||| || || |||||||| || ||||| ||| Sbjct 192400 TGTTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCTTGGATT 192341 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || ||||| ||||| ||||| || || ||||| || ||||| Sbjct 192340 TTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTCTTACCC 192281 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| || || || ||||| || Sbjct 192280 GTGAGGGTTTTGACGAAGATCTGCATCTT 192252 >seq1642 Length=65368 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | || || || | |||| |||||| || ||||| || Sbjct 54391 ATACCACCACGAAGACGCAAGACAAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCA 54332 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | || ||||| ||||||||||| ||||| ||||| || Sbjct 54331 GCCAGGGTTCTGCCATCTTCGAGCTGCTTTCCTGCAAAAATTAACCTCTGCTGATCTGGG 54272 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| || |||| || | ||| || || || ||| ||| Sbjct 54271 GGAATACCTTCTTTATCTTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCC 54212 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || ||||| || ||||| Sbjct 54211 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 54162 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||| ||| || ||| || ||||| | | || || ||| || ||||| || || Sbjct 34191 GTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAATTGCTTCCCA 34132 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || || ||||||||||| || || ||||| || || || |||||||| | || Sbjct 34131 GCAAAGATCAACCTCTGTTGATCTGGCGGGATTCCCTCCTTGTCCTGTATTTTTGCCTTC 34072 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | ||| || || || ||| || || |||| || || || || || || | ||| Sbjct 34071 ACATTATCTATGGTGTCTGAACTTTCTACCTCTAAGGTAATGGTCTTTCCAGTCAACGTC 34012 Query 193344 TTTACAAATATTTGCAT 193360 || ||||| |||||||| Sbjct 34011 TTCACAAAGATTTGCAT 33995 >seq1039 Length=240209 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || | || || || | || | |||||| || ||||| || Sbjct 129073 ATACCACCACGAAGACGCAACACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCA 129132 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | |||||||| |||||||| || ||||| ||||| || Sbjct 129133 GCCAGGGTTCTGCCATCTTCGAGCTGTTTTCCCGCAAAAATCAACCTCTGCTGATCTGGG 129192 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||||||||| |||| || | ||| || || || ||| ||| Sbjct 129193 GGAATACCTTCTTTATCTTGTATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCT 129252 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || ||||| || ||||| Sbjct 129253 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 129302 >seq37 Length=1182629 Score = 89.7 bits (98), Expect = 9e-13 Identities = 159/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| ||||| || || || ||||| | |||| ||| || ||||| || || Sbjct 291938 ATACCACCCCTCAAACGCAGCACAAGATGAAGGGTAGACTCCTTCTGGATATTGTAATCC 291997 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTT-TCCGGCAAAAATTAATCTCTGTTGATCAGG 193249 | | || || ||| || || ||||| ||| ||||| || || ||||| ||||| || Sbjct 291998 GCAAGGGTCCTTCCATCTTCCAACTGTTTATCCAGCAAAGATCAACCTCTGCTGATCTGG 292057 Query 193250 AGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTC 193309 || || || || ||||| || || || | || | ||| ||| || || || || Sbjct 292058 GGGAATACCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCAATGGTGTCTGAGCTTTC 292117 Query 193310 AACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||||| || || || || | || || |||||||||||||| Sbjct 292118 CACCTCCAAGGTTATGGTCTTTCCGGTCAAAGTCTTCACAAATATTTGCAT 292168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899345998471680