Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq31 221 4e-52 seq520 188 2e-42 seq1210 176 1e-38 seq428 141 3e-28 seq309 138 3e-27 seq1425 113 1e-19 seq92 111 5e-19 seq662 109 2e-18 seq106 84.2 6e-11 >seq31 Length=1468034 Score = 221 bits (244), Expect = 4e-52 Identities = 357/506 (71%), Gaps = 12/506 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 ||||||||||| |||| | | ||||| | || | || || | ||| || || || Sbjct 1355862 CTATCAAACCTTCCAGGTCTAAGCAATGCAGAATCAAGAATTTCAGGTCTATTAGTAGCA 1355803 Query 288910 GCCAATACAACAATAGATTCGGT-TTGCT--TAAATCCATCCATACTTGTTAAAATTTGA 288966 || |||| |||||| | || || | |||| |||||||| || || | ||| Sbjct 1355802 GC-AATA--ACAATAACACCAGTATTACCACTAAAACCATCCATTTCAGTCAACAACTGA 1355746 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||||||||| |||||||||||| || | ||| ||| | | | ||| | || Sbjct 1355745 TTCAATGTTTGTTCTCTTTCATCATTTCCTCCACC--AAT-ACCTGTACCTCTCTGTCTT 1355689 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 |||||||||||||| || ||||| || |||| |||||| ||||||| | |||| | Sbjct 1355688 ---CCAACAGCATCAATCTCATCAATAAATATCAAACACGGTGAATTTTCTTTCGCCTTA 1355632 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 ||| || |||||||| | || || |||| ||||||| |||| || | ||||| ||| Sbjct 1355631 TTAAACAAATCTCTTACTCTTGAAGCACCAACACCAACAAACATCTCAATGAATTCTGAA 1355572 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | |||| | || ||||| || |||||||| ||||| | ||| | || || |||||| Sbjct 1355571 CCTGATAATGAAAAGAATGGAACTTTTGCTTCTCCTGCAATTGCTTTTGCTAGTAGTGTC 1355512 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 || ||||| |||||||| || |||| |||||||| || || | |||||| || || Sbjct 1355511 TTTCCTGTCCCAGGTGGACCTACTAAAAGAACTCCTTTAGGAATTTTTGCTCCGAGTGAT 1355452 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 | ||||||||||| | | ||| || || || || || | | || | ||||| ||| Sbjct 1355451 GAAAATTTCTCAGGGGTTTGTAAGAACTCAACTATCTCTTGGAAATCTTGCTTTGCTTCA 1355392 Query 289327 TCACATCCTGCTACATCAGCAAAAGT 289352 || ||| ||||||||| |||| || Sbjct 1355391 TCTACTCCAGCTACATCATCAAATGT 1355366 >seq520 Length=294854 Score = 188 bits (208), Expect = 2e-42 Identities = 542/820 (66%), Gaps = 23/820 (3%) Strand=Plus/Minus Query 133081 TATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGATTTATT 133140 ||||||||| ||| | || | |||||| | ||||| |||||| ||| || ||| Sbjct 262668 TATGTTCCCGATTCAATACCCTAAAATTTGGGAAATGTACAAAAAAGCCGAAGCTTCATT 262609 Query 133141 TTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTTACTGG 133200 ||||| || ||||| ||| | || |||| | | |||||| | ||| || | Sbjct 262608 CTGGACAGCAGAAGAAGTCGATCTCTCACAAGATCTTCCTCACTGGAACAACCTAACCGA 262549 Query 133201 GGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGT 133260 | ||| || || || || || | || || ||||| || || ||||| || Sbjct 262548 CGGCGAACGTCACTTCATCTCACACGTTCTTGCTTTCTTTGCCGCCTCCGACGGTATAGT 262489 Query 133261 TCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTT 133320 | || ||| | | | | || ||| |||||||||| | | || || |||||||| Sbjct 262488 CTTGGAGAATCTTGCCGGAAGATTCATGAAAGAAGTTCAAGTCTCTGAGGCACGTGCCTT 262429 Query 133321 TTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTC-TAATTG 133379 ||| || | ||||| ||||| ||||| || |||||| | ||| | ||| | |||| Sbjct 262428 TTACGGTTTCCAGATCGCGATTGAAAACATTCATTCTGAAATGTATAGT-CTCTTGATTG 262370 Query 133380 ATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGCGAATTTC 133439 | ||||| ||||| ||| | || | ||| | |||| | || ||| | ||| Sbjct 262369 AGACTTATATCAATGATTCTATCGAAAAGAATCGTTTATTTCATGCAATTGACACGATTC 262310 Query 133440 CTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT- 133498 |||||||| |||||| |||| |||||||| ||||||||| | | | || | Sbjct 262309 CTTGTATTGCCAAGAAAGCTGATTGGGCTATGAAATGGATC-----GATTCATCTGATTC 262255 Query 133499 -TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTT 133557 |||||| | |||||||||||||| || || || || |||||| ||| || Sbjct 262254 ATTTGCTGAAAGAATCGTTGCTTTTGCTTGTGTTGAAGGTATATTTTTCTCCGGTAGTTT 262195 Query 133558 CTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 ||| || ||||||||||||||||| |||||| | | ||||| | |||||| ||||| Sbjct 262194 CTGTTCAATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGA 262135 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATT 133677 ||||||||| | ||||| | ||||| || ||||| ||||||| | || || Sbjct 262134 GCTTATTTCACGTGACGAAGGTCTTCATTGTGATTTTGCTTGTTTACTTTATTCGCTTTT 262075 Query 133678 -AGAGCGACCACTCA-AAAAGAATAAGATTGAAGA-AATTATTAGAGAAGCGGTTGAAAT 133734 ||| || ||| | |||| | |||| | ||| || | || ||||||||||| Sbjct 262074 GAGAAAGA-AACTTAGTGAAGA--GCGTGTGAAAACTATTGTTCGTGATGCGGTTGAAAT 262018 Query 133735 TGAGGTTGAATTTATCAATAGTGCTCTGCCGTGCCGTTTAATTGGTATGAATGATGTGCT 133794 |||| |||||| | | || || || || ||| |||| ||||| | || | Sbjct 262017 TGAGAGAGAATTTGTTTGTGAAGCGCTTCCTTGTGCTTTGGTTGGAATGAACGGTGATTT 261958 Query 133795 GATGCAGCGTTATATTGAATTTGTAGCTGACAG---ATTGGCCGTTCAGTTAGGTGGGGA 133851 |||| | |||||||| ||||| ||||| || ||||| || | || | || ||| Sbjct 261957 GATGAGTCAATATATTGAGTTTGTTGCTGATAGATTATTGG--GTGAACTTGGTTGTGGA 261900 Query 133852 TAAGATT-TACGGTTCCGCCAATCCATTCGACTGGATGGA 133890 || || || |||| | ||||| || || |||||||| Sbjct 261899 AAAATTTATAATGTTCAG--AATCCTTTTGATTGGATGGA 261862 >seq1210 Length=122563 Score = 176 bits (194), Expect = 1e-38 Identities = 561/856 (66%), Gaps = 23/856 (3%) Strand=Plus/Plus Query 133045 AGAACCCCTTCTAACCCCAGACGATAATAGGTTTGTTATGTTCCCAATTAAGGACGACGA 133104 |||||| ||||| ||||| || | | | || ||||||||||||| | || | Sbjct 42225 AGAACCACTTCTCGCCCCAAACCCTGACCGTTTCTGTATGTTCCCAATTCAATACCCTAA 42284 Query 133105 GATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGATTT 133164 || ||| | ||||| |||||| ||| || || ||||| | ||||| ||||| Sbjct 42285 AATCTGGGAAATGTACAAAAAAGCCGAAGCTTCTTTCTGGACCGCCGAAGAAGTCGATTT 42344 Query 133165 ATCCAAAGACCCAGCCCACTGGGAAGCCCTTACTGGGGATGAAAAACATTTTATTTCTAT 133224 ||| |||| | |||||| | ||| || | | ||| || ||||| || Sbjct 42345 ATCGGAAGATCTTCATCACTGGAACAACCTAACCGACGGCGAACGCCACTTTATCTCACA 42404 Query 133225 GATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTT 133284 || | || || ||||| || || || || || | || ||| | | | | | || Sbjct 42405 CGTTCTTGCCTTCTTTGCCGCTTCCGACGGCATCGTCTTGGAGAATCTTGCAGGAAGATT 42464 Query 133285 TATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGA 133344 ||| |||||||||| | | || || ||||| || || || | ||||| || || || Sbjct 42465 CATGAAAGAAGTTCAAGTCTCAGAGGCGCGTGCTTTCTACGGATTCCAGATCGCAATCGA 42524 Query 133345 AAATATCCATTCTATCACATATTCTACTCTA-ATTGATACTTACATCAAAGATACCGTCC 133403 ||||| |||||| | ||| | |||| ||||| ||||| ||||| ||| | || Sbjct 42525 GAATATTCATTCTGAAATGTATAGT-CTCTTGATTGAGACTTATATCAATGATTCAGTTG 42583 Query 133404 AGAAGCACAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCTGA 133461 ||||| | | || | || ||| | ||| |||||||||||| ||||||| |||| Sbjct 42584 AGAAGAATCGTTTGTTTCATGCAATTGAAACGA--TTCCTTGTATTACAAAGAAAGCTGA 42641 Query 133462 CTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT--TTTGCTACTCGTCTCGTTGCT 133519 |||||||| ||||||||| | | | || | |||||| | |||||||| Sbjct 42642 TTGGGCTATGAAATGGATC-----GATTCATCTGATTCATTTGCTGAAAGGATCGTTGCT 42696 Query 133520 TTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAA 133579 |||||| || || || || |||||| ||| ||||| | ||||| ||||||||| Sbjct 42697 TTTGCTTGTGTTGAAGGTATATTTTTCTCTGGAAGTTTCTGTGCAATTTTCTGGCTTAAA 42756 Query 133580 AAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCA 133639 || |||||| | | ||||| | |||||| ||||| ||||||||| | ||||| | | Sbjct 42757 AAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCACGTGACGAAGGA 42816 Query 133640 CTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATT-AGAGCGACCACTCA-AAAAGA 133697 ||||| || ||||| ||| || | || || ||| || ||| | |||| Sbjct 42817 CTTCATTGTGATTTTGCTTGTTTGATTTATTCGCTTTTGAGAAAGA-AACTTAGCGAAGA 42875 Query 133698 ATAAGATTGAAGA-AATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATAGT 133756 | |||||| ||| | | || || ||||| || ||| |||||| | Sbjct 42876 --GCGTGTGAAGACGATTGTGCGCGATGCTGTTGAGATCGAGAGAGAATTTGTTTGCGAA 42933 Query 133757 GCTCTGCCGTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATTGAATTT 133816 || || || ||| |||| |||| ||||||| || ||||| | |||||||| ||| Sbjct 42934 GCGCTTCCTTGCGCTTTAGTTGGAATGAATGGTGATTTGATGAGTCAGTATATTGAGTTT 42993 Query 133817 GTAGCTGACAGATTGGCCGTTCAGTTAGGT--GGGGATAAGATTTACGGTTCCGCCAATC 133874 || ||||| |||||| | || | ||| |||| || | || |||| | |||| Sbjct 42994 GTTGCTGATAGATTGTTGTGTGAGCTTGGTTGTGGGAAAATTTATAATGTTCAG--AATC 43051 Query 133875 CATTCGACTGGATGGA 133890 | || || |||||||| Sbjct 43052 CTTTTGATTGGATGGA 43067 >seq428 Length=334874 Score = 141 bits (156), Expect = 3e-28 Identities = 327/484 (68%), Gaps = 14/484 (3%) Strand=Plus/Plus Query 288873 TAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGT 288932 |||||| | ||| | || ||||||||||| |||||||| | ||||||| |||| Sbjct 182713 TAATGCAGAGTCAAGAATGTCGGCTCTGTTAGTTGCTGCAA---CAACAATGACACCGGT 182769 Query 288933 TTG---CTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATC 288989 | || |||||||||||| ||| |||| ||| || || || ||||| ||||| || Sbjct 182770 ATTACCCTCAAATCCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCGTC 182829 Query 288990 ATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTC 289049 ||| || | ||| |||| || ||| || | || ||||||||||||||||| || Sbjct 182830 ATTCCCTCCACC--AATT-CCCG--TCCCTCTTTGTCTT-CCAACAGCATCAATTTCATC 182883 Query 289050 AATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGA 289109 || || | | ||| |||| ||| | | | || | || || || | ||||| || Sbjct 182884 AACAAAGACAATACAAGGAGCATTCTCTTTAGCCTTCTTGAACAAATCACGGACACGAGA 182943 Query 289110 TGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTA 289168 || |||| ||||||| |||| || ||||| |||||| | |||| | || | || | | Sbjct 182944 AGCACCAATACCAACAAACATCTCAACAAACTCAGAACCTGATA-TAGAGAAAAACGGAA 183002 Query 289169 CATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCT 289228 || ||||| || || | ||| | || | | |||||| || ||||| || || || Sbjct 183003 CACCGGCTTCACCAGCAATAGCCTTGGCTAACAATGTCTTTCCAGTTCCTGGAGGACCAA 183062 Query 289229 CTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTA 289288 | | |||||||| || |||| || || | || | || ||||||| |||| | Sbjct 183063 CAAGAAGAACTCCTTTCGGTATACGAGCACCTACGGAAGTGAATCTCTCAGGCTTCTTGA 183122 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348 |||||| || | ||| || || | || || ||||| || || |||||| ||| Sbjct 183123 GAAATTCAACCACCTCCATAAAGTCCTGCTTGGCTTCATCCACCCCAGCAACATCATCAA 183182 Query 289349 AAGT 289352 | || Sbjct 183183 ATGT 183186 >seq309 Length=414593 Score = 138 bits (152), Expect = 3e-27 Identities = 364/546 (67%), Gaps = 20/546 (4%) Strand=Plus/Plus Query 288816 ACCAGATACATCAGGCAAACCCACCCGCACCCTCCTATCAAACCTACCAGAACGAGTTAA 288875 ||||| ||||||||| | | || || |||||||||||| |||| | | || Sbjct 386701 ACCAGCAACATCAGGCCTATCGACAGTAACTTGCCTATCAAACCTTCCAGGTCTAAGCAA 386760 Query 288876 TGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTG 288935 ||| | || | | ||| | ||| || || || ||||| |||| || || || Sbjct 386761 TGCAGAATCAAGAACATCAGGTCTATTAGTAGCAGCCAAAACAATAACCCC--CGAATTA 386818 Query 288936 CTT--AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 | |||||||||||| || |||| ||||||| ||| |||||||| |||||||| Sbjct 386819 CCCGAAAATCCATCCATCTCAGTCAAAAGCTGATTAATTGTCTGTTCCCTCTCATCATTC 386878 Query 288994 GAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATG 289053 ||| | | || | | | ||| | | | ||||||||||||||||| ||||| Sbjct 386879 CCACCACCA-AGTCC-----AGCACCCCTCTGTCTCCCAACAGCATCAATTTCATCAATA 386932 Query 289054 AAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCT 289113 || | | || || | || | || | |||| || || || || | || || Sbjct 386933 AACACAATGCAAGGCGCCTTCGACTTTGCCTTCTCAAACAAATCCCTAACCCTAGAAGCA 386992 Query 289114 CCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACATT 289172 |||| ||||||| ||| ||| ||||| || ||||| | || ||| ||| | |||| Sbjct 386993 CCAACACCAACAAACAATTCCACAAACTCCGAAGCCGC-ACACGAAAAGAACGGTACACC 387051 Query 289173 TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA 289232 ||||| || || || |||||||| | |||||||| || ||||| ||||| || | || Sbjct 387052 AGCTTCCCCGGCAACCGCCCTCGCTAATAGTGTCTTTCCGGTTCCCGGTGGCCCAACCAA 387111 Query 289233 TAGAACTCCCTTTGGTACTTTT-GCCCC---AGCAGACTTATATTTCTCAGGGCTCTTTA 289288 ||| | |||||| | | | || || || ||||| | || || ||||| |||| | Sbjct 387112 AAGA-CACCCTTTAGGAATCTTAGCACCTAAAGCAG---TGTACTTATCAGGATTCTTCA 387167 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348 | || || |||| ||| | | |||| || || | |||| || || || ||||||| Sbjct 387168 AGAAATCAACAACTTCTTGTAATTCAAGCTTAGCTTGATCAGCACCAGCCACGTCAGCAA 387227 Query 289349 AAGTAA 289354 |||||| Sbjct 387228 AAGTAA 387233 >seq1425 Length=90209 Score = 113 bits (124), Expect = 1e-19 Identities = 314/470 (67%), Gaps = 19/470 (4%) Strand=Plus/Minus Query 288882 GTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGT--TTGCTTA 288939 |||||||||||| ||||| ||||| |||| | ||||||| | || || | | Sbjct 14092 GTCTAATATATCAGCTCTATTTGTACCTGCTAGCACAACAACTCCAGCAGTAGTTCC--A 14035 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || | |||||| | || ||| | |||||||||||||| Sbjct 14034 AAACCATCCATCTCCACCAACAATTGATTTAAAGTACTTTCACGCTCATCATTTGAACCA 13975 Query 289000 CTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 || | || ||| | |||||| ||||| |||||||| || ||||| || | Sbjct 13974 GAGAAACCTCCACGA----CCCCTTTTCCGACCAATTGCATCAATCTCATCAATAAATAC 13919 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCA 289116 | || |||| || || || || || | ||| || | ||| || | ||| | |||| Sbjct 13918 TATACTAGGAGCGTTCTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTGGACGGTCCA 13861 Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA-TGTTACATTTGC 289175 | ||| ||| ||||||| | || |||||| | |||| | ||| ||| || ||| | Sbjct 13860 ACACCGACAAACATTTCCATGAAATCAGAACCAGATA-TAGAAAGAAATGGCACACCAGA 13802 Query 289176 TTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAG 289235 || ||||| ||| | || | |||||| || || || || || || ||| | | || Sbjct 13801 CTCCCCTGCAGTTGCTTTTGCTAAAAGTGTTTTTCCCGTGCCTGGGGGACCCACCAGAAG 13742 Query 289236 AACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTT-ATATTTCTCAGGGCTCTTTAAAAAT 289293 | | || || || | ||| || ||| || ||| ||| |||| ||| |||| | || Sbjct 13741 AGCACCTTTAGGAATTTTGGCACCA--AGCTCTTCATACTTCTTAGGATTCTTGAGGAAG 13684 Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | |||| ||| || ||| | ||||||||||||||| || || ||||| Sbjct 13683 TGCACAAACTCCATAATTTCTTGTTTTGCCTCATCACAGCCAGCAACATC 13634 >seq92 Length=773687 Score = 111 bits (122), Expect = 5e-19 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||| || |||||||| ||||| || ||||| | |||||| |||| | Sbjct 23853 TACCTTTCCTCTTGCCTCCCCCCTGATCAACATAACGGGCAGTGTCATTGAACACACGCA 23794 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 ||| |||| ||||||||| ||||| ||||| ||||| ||||| | ||| | | | Sbjct 23793 ACATTGGAACAATACCATTAGAAGTCCCATTTGTTCCACGAATGTAACTGCCATAGGCAC 23734 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 | | ||||||| | | ||||| || || | ||||| ||| ||| || |||| Sbjct 23733 GTATGTTATGAACAGAAACACCAATTCCTCCAGCAGATTTACTAATGACAGCACACTCCT 23674 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | | ||||| |||| || |||||| ||| |||| ||| Sbjct 23673 TCAGAGTATCATAAATCCCCTCAATACTATCCTCTTTCAT 23634 >seq662 Length=244491 Score = 109 bits (120), Expect = 2e-18 Identities = 340/515 (66%), Gaps = 30/515 (6%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||||| || | | ||| || | ||| | || || || ||||| |||||| Sbjct 188865 CTATCAAACCGCCCCGGTCTCAATAAAGCAGAGTCAAGAATGTCAGCCCTGTTGGTTGCT 188806 Query 288910 GCCAATACAACAATAGATTCGGTTTG---CTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||| ||||| |||| | || |||||||||||| ||| |||| ||| Sbjct 188805 GC-AATG--ACAATGACCCCGGTATTACCCTCAAATCCATCCATTTCTGTCAAAAGTTGG 188749 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACC----CGAATCGCTCCt 289022 || || || ||||| |||||||| || |||| |||| | | | ||| | Sbjct 188748 TTGAGGGTCTGTTCTCTTTCATCGTTC---CCTC------CACCAATTCCAGTGCCTCGT 188698 Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 | || ||| ||||||||||||| |||| |||| | ||| |||| ||| | | | || Sbjct 188697 TGCCTTCCCA-CAGCATCAATTTCATCAACAAAAACAATACAAGGAGCATTCTCTTTGGC 188639 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | ||||| || | || || || || |||| ||| ||| |||| || ||||| || Sbjct 188638 TTTCTTGAATAAATCACGAACTCGAGAAGCACCAACACCGACAAACATCTCAACAAACTC 188579 Query 289143 AGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 |||| | || | |||| | || | ||| |||||| || || | ||| | || | | Sbjct 188578 AGAACCAGAGA-TTGAGAAAAACGGGACACCTGCTTCACCCGCAATAGCCTTGGCTAATA 188520 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC-- 289259 | |||||||| || || || || || | | |||||||| ||||||| ||||| Sbjct 188519 GCGTCTTACCAGTCCCTGGGGGACCAACGAGAAGAACTCCTTTTGGTATGCGAGCCCCGA 188460 Query 289260 -AGCAGACTTATATTTCTCAGGGCTCTTT-AAAAATTCTACAATTTCCTCAAGTTCATAT 289317 ||||| | | |||| ||||| ||| | ||| || || | ||| || || | | Sbjct 188459 TAGCAG---TGAACCTCTC-GGGCTTTTTCAGAAACTCGACTACCTCCATAAAATCCTGT 188404 Query 289318 TTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 || || ||||| || || |||||| |||| || Sbjct 188403 TTGGCTTCATCTACCCCAGCAACATCATCAAATGT 188369 >seq106 Length=1011470 Score = 84.2 bits (92), Expect = 6e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGAT 251484 ||||||||||| ||||| |||||| | ||| | | | |||| ||||| ||| Sbjct 286583 CACACATGGACCCTGTATGCATCACTTTGATCAAACAATCTTTCCTTCATGAAGTGAGCA 286524 Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || || || | ||||| |||||||| |||||||| || || |||||||| ||||| || Sbjct 286523 GCTCCATGGGCTATCATGCAATCACGTTCCATTTCTCCAAATCGAAGACCTCCATCTCGT 286464 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | | ||||| ||||| || | || ||| | | |||||| || ||| Sbjct 286463 GAGCGCCCCTCAGCAGGTTGCCTTGTAAGAATCTGAACAGGACCTCGTCCACGAGAATGG 286404 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 |||||||| ||||||||||| | | ||||| | | ||||| | ||| || Sbjct 286403 ATCTTATCATCAACCATATGCTTCAATCTTTGGTAATAGGTAGGACCAAGGAAAAT 286348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471300447449888