Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1740 114 8e-21 seq78 109 4e-19 seq1436 107 1e-18 seq1039 107 1e-18 seq1642 104 2e-17 seq276 104 2e-17 seq37 98.7 6e-16 seq426 95.1 8e-15 seq23 91.5 1e-13 seq322 89.7 3e-13 seq319 86.0 4e-12 >seq1740 Length=56962 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| || |||| |||| || ||||| ||||| || || | || | | | |||| Sbjct 21877 CAAGACAAGATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCTGCCATC 21818 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || |||||||| || || |||| | |||||||||| | || | ||||| ||||| Sbjct 21817 TTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTC 21758 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| |||| | || | ||| || |||| ||| ||||| Sbjct 21757 TTGAATCTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGT 21698 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| |||||||||||||||||||||||||| Sbjct 21697 CTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 21665 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| ||| ||||||||||||||| ||||| | || | | |||| ||| Sbjct 22557 ACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCC 22498 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | || |||||||| | | Sbjct 22497 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGT 22438 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGT 34944 |||||| ||||| || |||| || | || | || || || | ||| ||||| Sbjct 22437 ATTTTTGCCTTGAC--AT--TATCAATTGTGTCTGAACTTTCTACTTCCAAGGTGATGGT 22382 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || | ||||| |||||||||||||| Sbjct 22381 CTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 22349 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||| ||||||| |||| ||| |||||||||||||| || | Sbjct 42315 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGAACTCTTTCTGAATGTTATAATCAGCC 42374 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| ||||| |||||||| || || |||| | |||||||||| | || Sbjct 42375 AAAGTCCGGCCATCTTCCAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGG 42434 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | ||| || || || | || | || | ||| || Sbjct 42435 ATACCTTCTTTGTCCTGTATCTTGGTCTTCACATTGTCAATAGTGTCTGAGCTCTCTACC 42494 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| || |||||||| || || ||||| || || |||||||| Sbjct 42495 TCCAAGGTAATAGTCTTTCCGGTAAGAGTCTTCACGAAAATCTGCAT 42541 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| |||||| || ||||| || || | ||| | ||| |||| Sbjct 21648 AGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCC 21589 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || || ||||| || ||||||||| | || | ||| ||||| || Sbjct 21588 TCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCT 21529 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || |||| | ||| ||| || || | || ||||| Sbjct 21528 TGAATCTTGGCTTTAACATTGTCTATGGTATCAGAACTCTCAACTTCGAGAGTAATGGTT 21469 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| |||||||| ||||| Sbjct 21468 TTACCAGTGAGGGTCTTGACAAAGATTTGCAT 21437 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | ||||| || |||| |||| |||||||| ||||| || || | Sbjct 22347 CCTCCCCTCAAACGAAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 22288 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | || |||| || || ||||| || ||||| || |||| |||||||| | || Sbjct 22287 AAGGTACGGCCATCTTCAAGCTGCTTCCCAGCGAAAATGAGTCTCTGCTGGTCCGGAGGA 22228 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || ||| || | || | || ||| || Sbjct 22227 ATGCCCTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATTGTGTCTGAACTCTCAACC 22168 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | || |||||||| || || | |||||| |||||||| |||||| Sbjct 22167 TCCAAAGTGATGGTCTTCCCTGTCAAGGTCTTCACAAAGATTTGCATG 22120 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| | || | | |||| |||| |||||| || || || Sbjct 42122 CTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAA 42181 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| | ||||| ||| | || | ||||||||||| | |||||| ||||| | Sbjct 42182 GATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGTATTTTGGCCTTGAC--A 42239 Query 34906 TGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | |||| || | || | || || || | ||| ||||||||||| || | ||||| Sbjct 42240 T--TATCAATTGTGTCTGAACTTTCTACCTCTAAGGTAATGGTCTTTCCAGTCAAGGTCT 42297 Query 34962 TTACAAAGATCTGCAT 34977 | |||||||| ||||| Sbjct 42298 TCACAAAGATTTGCAT 42313 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | ||||| || |||| ||| |||||||| ||||| || || | Sbjct 42771 CCTCCCCTCAAACGAAGGACAAGATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCC 42830 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| || || |||||||| || || |||| | ||||||||| | || Sbjct 42831 AATGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCCGGAGGA 42890 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || ||| || | |||| || ||| || Sbjct 42891 ATGCCCTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATCGTGTCTGAACTCTCAACC 42950 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || ||||| || || || | ||||||||||| |||||||| Sbjct 42951 TCCAAAGTAATGGTTTTCCCTGTCAATGTCTTTACAAAAATCTGCAT 42997 >seq78 Length=963227 Score = 109 bits (120), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || |||||||| ||||| ||||| | || |||| |||| Sbjct 604647 AGAACAAGGTGAAGAGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCATCT 604706 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || | ||||||||||||||||| || ||||||||||| | || | || |||||||| Sbjct 604707 TCTAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCT 604766 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || |||||| || | ||||| ||| | ||| || || | |||||| Sbjct 604767 TGGATCTTGGCTTTGAC--AT--TGTCGATTGTGTCAGAAGACTCAACCTCGAGGGTTAT 604822 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || || ||||||||||| Sbjct 604823 CGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 604858 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || |||||||| || || ||||| | || |||| | || Sbjct 597686 AGAACAAGGTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCT 597745 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || |||||||||||||| |||||||| || || | || | || |||||||| Sbjct 597746 TCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCT 597805 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | || | ||| | || || || | |||||| ||| Sbjct 597806 TGGATTTTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTC 597865 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| ||||| || || ||||||||||| Sbjct 597866 TTACCCGTTAGGGTTTTGACGAAGATCTGCAT 597897 >seq1436 Length=88924 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| || || | || |||| | || || ||||| |||||||||||| Sbjct 7302 TCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCCGTCTTCAAGTTGTTTTCCGGCGAAG 7361 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || |||||||| | || | || |||||||| | ||||| ||||||| Sbjct 7362 ATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATTTTGGCTTTGACGTTG 7421 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | ||||||||| || || || ||||| || ||| Sbjct 7422 TCGATGGTGTCAGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCACA 7481 Query 34967 AAGATCTGCATGAT 34980 |||||||||||||| Sbjct 7482 AAGATCTGCATGAT 7495 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| || || || ||||| || || | || | || | || Sbjct 39008 AGGACGAGGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCGTCT 39067 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| |||||||||||||| || || || |||||| | || | || |||||||| Sbjct 39068 TCGAGTTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCT 39127 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | || | || || || || || | ||||||||| Sbjct 39128 TGGATTTTGGCTTTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGT- 39186 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||| ||| ||||| || || |||||||||||||| Sbjct 39187 TTTGCCGGTAGGGTTTTCACGAAGATCTGCATGAT 39221 >seq1039 Length=240209 Score = 107 bits (118), Expect = 1e-18 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | ||| | | |||| ||| Sbjct 128638 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCC 128697 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | ||||| ||| | || | ||||||||||| | | Sbjct 128698 AATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGT 128757 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT--TCATTGGCC--TCGACATCAACGGTTATGGT 34944 |||||| ||||| || ||||||| | || | || || || | || ||||| Sbjct 128758 ATTTTTGCCTTGAC--AT--TATCGATCGTATCTGAACTTTCTACCTCCAATGTAATGGT 128813 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || | ||||| |||||||||||||| Sbjct 128814 CTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 128846 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||| ||||| |||||||| || | ||| | | |||| || Sbjct 129094 ACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCATCTTCG 129153 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || ||||| || || |||| | ||||| ||| | || | || || || || | | Sbjct 129154 AGCTGTTTTCCCGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCTTCTTTATCTTGT 129213 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||||| |||| | ||| ||| || |||| ||| ||||||||| Sbjct 129214 ATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCTACCTCAAGGGTGATGGTCTTT 129273 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||||||||| |||||||||||||| Sbjct 129274 CCAGTGAGGGTCTTAACAAAGATCTGCAT 129302 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||||| |||| |||| |||||||| ||||| || || | Sbjct 128848 CCTCCCCTCAAACGAAGGACCAGATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 128907 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | | || |||| || || |||||||| || || |||| | |||||| || | || Sbjct 128908 AAGGTACGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGA 128967 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | |||||||| || | ||| || || || | |||| || | ||| || Sbjct 128968 ATTCCCTCCTTATCCTGTATCTTAGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACC 129027 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| ||||| || || || || || || || |||||||| Sbjct 129028 TCCAAAGTTATTGTCTTACCGGTAAGAGTTTTCACGAAAATCTGCAT 129074 >seq1642 Length=65368 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | ||||| ||||||| |||| ||| |||||||||||||| || | Sbjct 33993 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCC 33934 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | || |||| ||||| |||||||| || || |||| || |||||||||| | || Sbjct 33933 AAAGTCCGGCCATCTTCCAGCTGCTTTCCAGCAAAAATCAATCTTTGCTGGTCTGGGGGG 33874 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || || ||||| | ||| || || || | || | || | ||| || Sbjct 33873 ATACCTTCTTTGTCCTGTATCTTGGCCTTTACATTGTCAATAGTGTCTGAGCTCTCTACC 33814 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||| || ||||| || || || ||||| || || |||||||| Sbjct 33813 TCCAAGGTAATAGTCTTCCCGGTAAGAGTCTTCACGAAAATCTGCAT 33767 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || ||||||| || ||||||||||||||| ||||| | || | | |||| ||| Sbjct 34203 ACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCC 34144 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||| || || ||||||| | || || ||| |||| | ||||||||||| | | Sbjct 34143 AATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGCGGGATTCCCTCCTTGTCCTGT 34084 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCC--TCGACATCAACGGTTATGGTCT 34946 |||||| || || |||| | || || | || || || | ||| ||||||| Sbjct 34083 ATTTTTGCCTTCACATTATCTATGGTGTC--TGAACTTTCTACCTCTAAGGTAATGGTCT 34026 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || | ||||| |||||||| ||||| Sbjct 34025 TTCCAGTCAACGTCTTCACAAAGATTTGCAT 33995 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| ||||||| ||| ||| ||||| |||||||| || | ||| | | |||| Sbjct 54374 CAAGACAAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCAGCCAGGGTTCTGCCATC 54315 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || |||||||| || || || | | ||||| ||| | || | || || || || Sbjct 54314 TTCGAGCTGCTTTCCTGCAAAAATTAACCTCTGCTGATCTGGGGGAATACCTTCTTTATC 54255 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| |||| | ||| ||| || |||| ||| ||||| Sbjct 54254 TTGAATCTTGGCCTTGACATTGTCTATGGTGTCAGAACTCTCCACCTCAAGGGTGATGGT 54195 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||||||||| |||||||||||||| Sbjct 54194 CTTTCCAGTGAGGGTCTTAACAAAGATCTGCAT 54162 >seq276 Length=436033 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || |||||||| || || ||||| | || |||| | || Sbjct 192466 AGAACAAGGTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCT 192407 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || |||||||||||||| |||||||| || || | || | || |||||||| Sbjct 192406 TCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCT 192347 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | || | ||| | || || || | |||||| ||| Sbjct 192346 TGGATTTTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTC 192287 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||||||||| || || ||||||||||| Sbjct 192286 TTACCCGTGAGGGTTTTGACGAAGATCTGCAT 192255 >seq37 Length=1182629 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||| ||||| || || | || | | | || Sbjct 292918 AGAACAAGATGAAGCGTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCGTCT 292977 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||||||||| || |||||||| || | || | || |||||||| Sbjct 292978 TCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGATCCGGAGGAATTCCTTCCTTGTCC 293037 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||||| | || | ||| | || || |||| ||| |||||| Sbjct 293038 TGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTC 293097 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || ||||| ||||| Sbjct 293098 TTTCCGGTGAGAGTTTTCACGAAGATTTGCAT 293129 >seq426 Length=522792 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || |||||||| || || ||||| | || |||| | || Sbjct 162607 AGAACAAGGTGAAGAGTTGATTCCTTCTGGATATTGTAGTCGGCAAGAGTGCGGCCGTCT 162666 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || ||||| |||||||| |||||||| || || | || | || |||||||| Sbjct 162667 TCAAGCTGTTTTCCTGCGAAGATGAGTCGTTGTTGATCCGGTGGAATTCCTTCCTTGTCT 162726 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | || | ||| | || || || | |||||| ||| Sbjct 162727 TGGATTTTGGCCTTGACGTTGTCGATGGTATCAGAAGATTCAACCTCGAGGGTTATCGTC 162786 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| ||||| || || ||||||||||| Sbjct 162787 TTACCCGTTAGGGTTTTGACGAAGATCTGCAT 162818 >seq23 Length=202804 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||| || || | || | || |||| || ||||| |||||||||||| Sbjct 5450 TCTTTTTGGATGTTGTAATCGGCAAGAGTACGGCCATCTTCGAGTTGTTTTCCGGCGAAG 5391 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| || ||| | || | || |||||||| | ||||| ||||||| Sbjct 5390 ATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTGTCTTGAATTTTGGCTTTGACGTTG 5331 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || || || || || | ||||||||| || || || ||||| || || Sbjct 5330 TCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGTTTTCACG 5271 Query 34967 AAGATCTGCATGATAGTG 34984 ||||| |||||| | ||| Sbjct 5270 AAGATTTGCATGGTGGTG 5253 >seq322 Length=397916 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || || |||| || || ||||||| |||| |||||| || ||||| || || | Sbjct 333868 CCACCTCTTAACCGCAACACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCTGCA 333927 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || | ||| || ||||||||||| || | |||||| || | || Sbjct 333928 AGGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATAAGCCTTTGCTGATCAGGTGGA 333987 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||| |||||||| | || || ||| ||| |||| | ||| ||| | Sbjct 333988 ATCCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCCGCC 334047 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| ||||| || ||| | | || || || || || ||||| Sbjct 334048 TCAAGGGTGATGGTTTTACCCATCAATGTTTTCACGAAAATTTGCAT 334094 >seq319 Length=603634 Score = 86.0 bits (94), Expect = 4e-12 Identities = 108/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 34743 AATCAT--TTCCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGT 34799 |||||| |||| ||||| | ||||||||||| ||||| || || | ||||| || |||| Sbjct 440678 AATCATGGTTCCACCCCTGAGCCTCAGGACCAAGTGAAGTGTTGAT-TCCTTTTGTATGT 440736 Query 34800 TATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCT 34859 |||| || | || |||| |||| ||||| ||||| || || || |||| | |||| Sbjct 440737 TATAATCAGCAAGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCT 440796 Query 34860 GGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| | || | || |||||||| Sbjct 440797 GGTCGGGAGGGATACCTTCCTTGTC 440821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325583943695456