Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq2235 89.7 2e-13 >seq2235 Length=34068 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | |||| ||| ||||||||| ||||||||| | Sbjct 14678 GTTGCGGAGACGGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTACGAGCTACCAAG 14619 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 14618 CTGCTCTACCCCGC 14605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181544059101888