Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trifolium_20subterraneum_20[genbank_20GCA_5F001742945.1_202016-07- 20] 27,424 sequences; 471,834,188 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1436 113 4e-20 seq933 104 2e-17 seq322 104 2e-17 seq37 104 2e-17 seq1740 102 8e-17 seq1039 102 8e-17 seq23 100 3e-16 seq1642 95.1 1e-14 seq78 89.7 5e-13 >seq1436 Length=88924 Score = 113 bits (124), Expect = 4e-20 Identities = 149/201 (74%), Gaps = 7/201 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 ||||| ||||| || || ||||||||| | | || || || || ||||| || || | Sbjct 39023 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTTCGGCCG--TCTTCGAGTTGTTTTC 39080 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | ||| | ||||| ||||| ||||| || || || ||||||||||| ||| ||| || Sbjct 39081 CGGCGAAGATGAGACGCTGTTGGTCTGGTGGAATTCCTTCCTTGTCTTGGAT-TTTGGCT 39139 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| || || || || | ||| | |||||||||||| || Sbjct 39140 TTGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGT-AGG 39198 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| ||||| ||||||||| Sbjct 39199 GTTTTCACGAAGATCTGCATG 39219 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| ||||| || || ||||||||| | | ||| ||| || || || || || Sbjct 7296 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTGCGGCCGTCTTCAAGTTGTTTTCCG 7355 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582 ||| | ||||| ||||||||||| || || || ||||||||||| ||| ||| || || Sbjct 7356 GCGAAGATGAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGAT-TTTGGCTTT 7414 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | || || || || | ||| | |||||||||||| || || Sbjct 7415 GACGTTGTCGATGGTGTCAGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGGT 7474 Query 133643 TTTTACGAAAATCTGCATG 133661 ||| || || ||||||||| Sbjct 7475 TTTCACAAAGATCTGCATG 7493 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||||||||||| ||||| ||||| | | || | || || | Sbjct 38786 AAATGAAGCGTGGACTCTTTCTGGATATTATAATCCGCAAGAGTTCTCCCATCTTCCAAT 38845 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | |||||||| || |||||||| ||||| || || ||| Sbjct 38846 TGCTTCCCTGCAAAGATCAATCGCTGCTGATCAGGAGGGATTCCTTCTTTATCCTGAATC 38905 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||||| || || || |||| |||| |||||| || Sbjct 38906 TTCGCCTTCACGTTGTCGATTGTGTCGGAGGATTCAACTTCGAGTGTGATGGTTTTTCCA 38965 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| || || || |||||| Sbjct 38966 GTTAGGGTTTTGACAAAGATTTGCATG 38992 >seq933 Length=173040 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| || || ||||| || |||||||| | | || ||||| || Sbjct 29446 AAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTTCCATCCTCAAGT 29387 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| |||||| || ||||||||||| || ||||| |||| Sbjct 29386 TGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGGATGCCCTCTTTGTCCTGGATC 29327 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| || |||| || || || || | ||||| |||||| || Sbjct 29326 TTGGCCTTGACATTATCAATTGTATCGGAGGATTCAACCTCAAGGGTGATGGTTTTTCCA 29267 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || ||||| ||||||||| Sbjct 29266 GTCAAGGTCTTAACGAATATCTGCATG 29240 >seq322 Length=397916 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| || || ||||| || |||||||| | | || ||||| || Sbjct 312552 AAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTTCCATCCTCAAGT 312611 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| |||||| || ||||||||||| || ||||| |||| Sbjct 312612 TGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGGATGCCCTCTTTGTCCTGGATC 312671 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| || |||| || || || || | ||||| |||||| || Sbjct 312672 TTGGCCTTGACATTATCAATTGTATCGGAGGATTCAACCTCAAGGGTGATGGTTTTTCCA 312731 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || ||||| ||||||||| Sbjct 312732 GTCAAGGTCTTAACGAATATCTGCATG 312758 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| || || ||||| || |||||||| | | || ||||| || Sbjct 333661 AAATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCTAGGGTTCTTCCATCCTCAAGT 333720 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| |||||| || ||||||||||| || ||||| |||| Sbjct 333721 TGCTTCCCTGCAAAGATAAGCCACTGCTGATCAGGAGGGATGCCCTCTTTGTCCTGGATC 333780 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| || || | || || || || | ||||| ||||||| Sbjct 333781 TTGGCCTTGACATTATCAATTGTATCTGAGGATTCAACCTCAAGGGTGATAATTTTGCCA 333840 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| |||||||| Sbjct 333841 GTCAAGGTCTTAACGAATATCTGCAT 333866 >seq37 Length=1182629 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || |||||||| | | || ||| || | |||||| || Sbjct 292933 GTGGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCTTCCGTCTTCCAACTGCTTTCCG 292992 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| || ||||| || ||||| || ||||||||||| |||||| ||| Sbjct 292993 GCGAAGATGAGACGTTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCTTTG 293052 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||||| || | ||||| ||| || ||||| |||||| Sbjct 293053 ACGTTGTCGATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTT 293112 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 293113 TTCACGAAGATTTGCAT 293129 >seq1740 Length=56962 Score = 102 bits (112), Expect = 8e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||||||| ||| || | | | || || | || Sbjct 43022 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTTCGGCCA-TCTTCCAACT 43080 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || || ||||||||| ||||||||| |||||||| || |||||||| |||| Sbjct 43081 GTTTTCCGGCAAAAATGAGCCTCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCT 43140 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| ||||| | | ||| || || | || | |||||||| | Sbjct 43141 TAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTAATTGTTTTGCCTG 43200 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || ||||||||||| Sbjct 43201 TAAGGGTCTTCACAAAAATCTGCAT 43225 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATC-GCCCATCGTGGACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| || |||||||| ||| || | | | | || || |||| Sbjct 42794 ATGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAATGTTCGGCCA-TCTTCAAGCT 42852 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| | || |||||||| ||||| ||||| |||||||| ||||| Sbjct 42853 GCTTTCCAGCAAAAATCAACCTTTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCT 42912 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | || | | |||| |||||| | ||| || || | || | |||||| || | Sbjct 42913 TAGCTTTTACATTGTCAATCGTGTCTGAACTCTCAACCTCCAAAGTAATGGTTTTCCCTG 42972 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||| ||||||||||| Sbjct 42973 TCAATGTCTTTACAAAAATCTGCAT 42997 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAG 133513 ||| | |||||| |||||||| || |||||||| | | || || | | || ||||| Sbjct 21868 ATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGCTAAGGTCCTG--CCA-TCTTCGAG 21812 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| | || |||||||| || ||||| || || ||||| || Sbjct 21811 CTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATTCCCTCTTTGTCTTGAAT 21752 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | ||||| | | |||||| || | ||||| ||| || || Sbjct 21751 CTTGGCCTTGACATTGTCTATGGTGTCTGAGCTCTCCACCTCAAGGGTGATGGTCTTTCC 21692 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || |||||||| Sbjct 21691 AGTGAGGGTCTTTACAAAGATCTGCAT 21665 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| |||||||||| || || ||||| ||| || | | | || || |||||||| | Sbjct 42344 GGTGAACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCA-TCTTCCAGCTGCTTTC 42402 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | || |||||||| || ||||| ||||| ||||| ||||| || Sbjct 42403 CAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGTATCTTGGTCT 42462 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | | ||| || || | ||| | || || ||||| |||| Sbjct 42463 TCACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTTCCGGTAAGAG 42522 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 42523 TCTTCACGAAAATCTGCAT 42541 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || || ||||| | | || || || |||||||| || Sbjct 42573 GTTGACTCTTTCTGGATGTTATAATCATCAAGAGTTCTGCCATCTTCAAGCTGCTTTCCA 42632 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || ||||||||| ||||||||| |||||||| || || ||||| ||||| ||| Sbjct 42633 GCAAAAATGAGCCTCTGCTGGTCTGGAGGGATACCCTCTTTGTCCTGTATCTTAGCCTTC 42692 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 || | |||| ||||| | | |||||| || | || | |||||| || |||| || Sbjct 42693 AGATTGTCAATTGTGTCTGAGCTCTCCACCTCAATAGTAATGGTTTTACCTGTCAATGTC 42752 Query 133644 TTTACGAAAATCTGCATGGCT 133664 || || || || |||||| || Sbjct 42753 TTCACAAAGATTTGCATGCCT 42773 >seq1039 Length=240209 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | |||||||| || || ||||||||||| | | || | |||||| ||| Sbjct 129325 AAATGGAGCGTGGACTCCTTTTGGATATTGTAATCAGCAAGGGTACGCCCGTCCTCCAGC 129384 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| || ||||||||||| || ||||| |||||||| || ||| Sbjct 129385 TGCTTTCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCTTGAATC 129444 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | || || | ||| || |||| |||| ||| |||||| Sbjct 129445 TTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTGCCG 129504 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| || ||||| Sbjct 129505 GTGAGGGTCTTAACGAAGATTTGCAT 129530 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || |||||||| ||| || | | | || ||||||| Sbjct 128871 ATGAAGGGTGGATTCCTTCTGGATGTTGTAATCAGCCAAGGTACGGCCA-TCTTCGAGCT 128929 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| | || ||||| || || || || || ||||| || |||| Sbjct 128930 GCTTTCCAGCAAAAATCAACCTTTGCTGATCCGGGGGAATTCCCTCCTTATCCTGTATCT 128989 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| |||||| | | ||| || || | || | || || |||| Sbjct 128990 TAGCCTTCACATTGTCAATCGTGTCTGAGCTCTCAACCTCCAAAGTTATTGTCTTACCGG 129049 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | |||||||| |||||||||||||| Sbjct 129050 TAAGAGTTTTCACGAAAATCTGCAT 129074 >seq23 Length=202804 Score = 100 bits (110), Expect = 3e-16 Identities = 146/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| ||||| || || ||||||||| | | || | | | || ||||| || || || Sbjct 5456 GTGGATTCTTTTTGGATGTTGTAATCGGCAAGAGTACGGCCA-TCTTCGAGTTGTTTTCC 5398 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || || || || || || ||||||||||| ||| ||| |||| Sbjct 5397 GGCGAAGATGAGACGTTGTTGATCTGGTGGAATTCCTTCCTTGTCT-TGAATTTTGGCTT 5339 Query 133583 -GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 || | || | ||||||| || || || || | ||| | |||||||||||| || | Sbjct 5338 TGACGTTGTCGATGGTGTCGGAGGATTCTACCTCTAGGGTTATGGTTTTGCCGGTTAGGG 5279 Query 133642 TTTTTACGAAAATCTGCATGG 133662 |||| ||||| || ||||||| Sbjct 5278 TTTTCACGAAGATTTGCATGG 5258 >seq1642 Length=65368 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || || ||||| ||| || | | | || || |||||||| | Sbjct 33964 GGTGGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCGGCCA-TCTTCCAGCTGCTTTC 33906 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | | |||||||| || ||||| ||||| ||||| ||||| || Sbjct 33905 CAGCAAAAATCAATCTTTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGTATCTTGGCCT 33846 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | | ||| || || | ||| | || || ||||| |||| Sbjct 33845 TTACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAGGTAATAGTCTTCCCGGTAAGAG 33786 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 33785 TCTTCACGAAAATCTGCAT 33767 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAG 133513 ||||| | ||| ||||||||||| || |||||||| | | || ||| | ||||| || Sbjct 54139 AAATGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGCTAAAGTCCGACCA-TCCTCAAG 54081 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | ||||||| ||| ||||| || || |||||||| ||||| || Sbjct 54080 CTGTTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCTGAAT 54021 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | || || | ||| || |||| |||| ||| ||||| Sbjct 54020 CTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTGCC 53961 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| || ||||| Sbjct 53960 AGTGAGGGTCTTAACGAAGATTTGCAT 53934 >seq78 Length=963227 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || ||||| ||| | | ||| | | | || || | |||||| || Sbjct 604662 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCA-TCTTCTAACTGCTTTCC 604720 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || |||||||| || || || ||||||||||| |||||| || Sbjct 604721 GGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCTTT 604780 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || |||| ||| | || || || || || || Sbjct 604781 GACATTGTCGATTGTGTCAGAAGACTCAACCTCGAGGGTTATCGTCTTCCCTGTTAGGGT 604840 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 604841 TTTCACGAAGATCTGCAT 604858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483255083349760