Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq498 105 1e-17 seq3 105 1e-17 seq415 104 5e-17 seq414 104 5e-17 seq98 104 5e-17 seq4 104 5e-17 seq2 104 5e-17 >seq498 Length=700450 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||||| || || |||| || ||||||||||||||||| Sbjct 414088 TGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 414147 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 414148 CCCCACGGTGGGC 414160 >seq3 Length=5347415 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||||| || || |||| || ||||||||||||||||| Sbjct 1186415 TGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1186356 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1186355 CCCCACGGTGGGC 1186343 >seq415 Length=3446356 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 3037973 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3037914 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3037913 CCCACGGTGGGC 3037902 >seq414 Length=5667865 Score = 104 bits (114), Expect = 5e-17 Identities = 569/897 (63%), Gaps = 25/897 (3%) Strand=Plus/Plus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| ||||||||| || || || | || ||||| ||||||||||| || | || Sbjct 3472908 TCTGCATGTTCCCAATTCAGTACCCTCAAATCTGGGAGATGTACAAGAAAGCAGAAGCCT 3472967 Query 229811 CTTTCTGGACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAAC 229870 | |||||||| | ||||| || |||| ||| ||| ||||| || Sbjct 3472968 CCTTCTGGACGGCGGAGGAGGTCGATCTGTCTCAAGATCTCGCTCACTGG-------TAC 3473020 Query 229871 TCAATGAC----GACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCC 229926 || |||| |||||| |||||||||||||| || |||| ||||||||| | |||| Sbjct 3473021 TCTCTGACGTCTGACGAAAAGCATTTCATCAAACATATTCTAGCTTTTTTCGCCGCCTCC 3473080 Query 229927 GATGGTATTGTGATGGAAAATCT-GCAGACCAACTTTAGTGTGGAAGTAACGGTTCCAGA 229985 || || || ||| | |||||||| || | ||| || | ||| || |||| | || Sbjct 3473081 GACGGGATCGTGCTCGAAAATCTCGCTG-CCAGGTTCATGAAGGAGGTCCAGGTTTCGGA 3473139 Query 229986 GGCACGGCAATTTTATGCTTACCAAACATTCAA-CGAATCTATCCATTCTGAACAATATG 230044 ||| || ||||| | | ||| | | ||| ||| ||||| ||||| ||| Sbjct 3473140 GGCTCGCGCGTTTTACGGCTTCCAGA-TTGCAATTGAAAACATCCACTCTGAGATGTATA 3473198 Query 230045 CTCTGCTTATCGACGCGCTTATTTC--CGACGAGCAAGAACGGAACGAGCTTTTTGATGC 230102 ||| || | || |||| || || ||||| || | ||| || ||| Sbjct 3473199 GTCTTCTATTGGA--AACTTACATCAAGGATTCTGAAGAAAAGAGCAGGCTCTTCCGTGC 3473256 Query 230103 CATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACC 230162 ||||||| | | || || | || ||||| | ||||| | ||| | || Sbjct 3473257 TATTGAAACCGTTCCTTGTGTCGAGAAGAAGGCGACTTGGGCCCTTCGTTGGATCGATGG 3473316 Query 230163 TGGTAAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTC 230222 | | | ||||| || ||| | || | || | | || || |||||||| | || || Sbjct 3473317 TTCTGAGTCGTTCGCAGAGAGGCTACTGGCTTTTGCCTGCGTGGAAGGTATATTTTTCTC 3473376 Query 230223 CGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCT 230282 || || ||||| || || || ||| || || | ||| ||||||| || | | Sbjct 3473377 GGGAAGCTTCTGTGCAATATTCTGGTTGAAAAAGAGGGGTCTGATGCCCGGGTTGACCTT 3473436 Query 230283 GTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTT-ATGT 230341 || || ||| |||| || || |||||| | ||| | ||| || |||| | | Sbjct 3473437 CTCCAATGAGCTCATTTCCCGGGATGAGGGTTTACATTGTGACTTC-GCTTGCTTGCTCT 3473495 Query 230342 ATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAG 230401 || ||| | ||||| || ||||| | || | | || |||| Sbjct 3473496 ATAGTCTGCTTAAAGTGAAGCTTAGTGAAGAAACGGTGCACGGGCTCGTGGCGGATGCAG 3473555 Query 230402 TTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACG 230461 | || | |||| |||||| ||||||| || | || || | || | || ||||| Sbjct 3473556 TGGATATTGAAAGGGAGTTTGTTTGTGATGCGTTGCCGTGCAGGCTGTTGGGAATGAATT 3473615 Query 230462 CTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTT 230521 | || | ||| | || ||||| || ||||| || || | | || |||||| | || | Sbjct 3473616 CAGAGTTGATGTGCCAATACATAGAGTTCGTGGCGGATAGATTGTTGGTTGCATTGGGGT 3473675 Query 230522 ACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTT-CAA 230580 || |||| ||||||| | |||||||||| | | ||||| |||| | |||| || Sbjct 3473676 ACAAGAAGCTGTACAATGCACAGAACCCCTTCGACTGGATGGAACTCA-TAAGCTTGCAG 3473734 Query 230581 GGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||| || |||||||| | ||| || |||| || || | | || ||| ||| Sbjct 3473735 GGGAAGACAAATTTCTTCGAGAGGCGAGTTGGTGAGTACCAAAAGGCTTCTGTTATG 3473791 >seq98 Length=3145730 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 2864361 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2864302 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2864301 CCCACGGTGGGC 2864290 >seq4 Length=3848081 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 117131 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 117072 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 117071 CCCACGGTGGGC 117060 >seq2 Length=6193689 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 5811184 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5811125 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5811124 CCCACGGTGGGC 5811113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816979354340