Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq414 113 5e-20 >seq414 Length=5667865 Score = 113 bits (124), Expect = 5e-20 Identities = 377/578 (65%), Gaps = 9/578 (2%) Strand=Plus/Minus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || ||||| || |||||||| ||||| || | | || || || || || || |||||| Sbjct 3473487 CAAGCGAAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAAC 3473428 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 ||||||||| || | || || ||||| ||||| || ||| || || || ||| Sbjct 3473427 CCGGGCATCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAAT 3473368 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 ||||| || ||| | ||||| || | || | || ||| ||| | | | ||| Sbjct 3473367 ATACCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAACGACTCAGAACCAT--CGA 3473310 Query 17144 ATCCATTTCTGCACCCAC-TCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT 17202 |||| | |||| ||| ||| || || | ||| | ||||| || || Sbjct 3473309 -TCCAACGAAGGGCCCAAGTCGCCTTCTT-CTCGACACAAGGAACGGTTTCAATAGCACG 3473252 Query 17203 AAATAATTT-CTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 || | | ||||||| || || || | || || || || | || || || ||| Sbjct 3473251 GAAGAGCCTGCTCTTTT--CTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATAC 3473194 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 || || ||||| ||||| || || || ||||| || |||||||| || || |||| Sbjct 3473193 ATCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAA 3473134 Query 17321 ATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCG 17380 | || || ||| ||| | | || ||||||||| |||||| |||||| ||| Sbjct 3473133 ACCTGGACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCG 3473074 Query 17381 GCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAG 17440 |||||||| || | ||||| || ||||||| |||||||| | || ||| | |||| Sbjct 3473073 GCGAAAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAG 3473014 Query 17441 TCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTT 17500 | | ||||| || | ||| || || || | ||||| || || |||| || Sbjct 3473013 TGAGCGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTC 3472954 Query 17501 TTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 || ||||| | ||| || | | ||| || || ||||| Sbjct 3472953 TTGTACATCTCCCAGATTTGAGGGTACTGAATTGGGAA 3472916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542248892240