Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq414 114 1e-20 >seq414 Length=5667865 Score = 114 bits (126), Expect = 1e-20 Identities = 200/290 (69%), Gaps = 1/290 (0%) Strand=Plus/Minus Query 16487 AGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCAT 16546 |||| ||| ||||| |||||||| || || || || || ||||| || ||||| || Sbjct 274727 AGTAGACTATACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCC 274668 Query 16547 CGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATA 16606 | ||||||| | || || ||| |||| | ||||| ||||| ||||| Sbjct 274667 CTGGCCTCCGAAACCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATT 274608 Query 16607 CCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTA 16666 || || ||| || || || || | | || || ||||||| || |||||||||||| Sbjct 274607 CCATCGGATGCCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTA 274548 Query 16667 AGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTA 16726 || | ||| | | ||||| |||| ||| |||||||| | |||||||||| | Sbjct 274547 AGGGAGTTCCAGTGACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAA 274488 Query 16727 GCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTA-TGGGAA 16775 ||| ||||||| || ||||| | ||| || ||| ||| || | |||||| Sbjct 274487 GCCTCTGCCTTCTTGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAA 274438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511411088591760