Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq414 185 1e-41 seq507 107 2e-18 >seq414 Length=5667865 Score = 185 bits (204), Expect = 1e-41 Identities = 394/584 (67%), Gaps = 6/584 (1%) Strand=Plus/Minus Query 24129 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 24188 || || || |||||||| || || ||||| || || | ||| | ||| ||||| || Sbjct 275015 ATTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAG 274956 Query 24189 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCAGA 24247 || | || ||||| | ||| | ||||| | ||| ||||| | |||| | | | || || Sbjct 274955 GTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAG-CGCAGAAGCTTCCGGA 274897 Query 24248 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGT- 24306 || || || ||||| || |||||||| | || || ||| | || | | | | Sbjct 274896 GAAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA--GACTCAGAA 274839 Query 24307 -CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365 | | ||||| | ||||||| |||||||||| ||||| || | || || || Sbjct 274838 CCCTCGATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATC 274779 Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425 ||| ||||| | | | || || | | ||| || | ||||| || | | |||||| Sbjct 274778 GCACGGAAGAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTA 274719 Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485 ||||| || || ||||| |||||||| || || || || || || || || ||||| Sbjct 274718 TACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCC 274659 Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 24545 | || ||| || || | |||| | || | ||| || || ||||| || Sbjct 274658 GAAACCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGAT 274599 Query 24546 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 24605 || || || || || | |||||||| || |||| || ||||| | ||| || ||| Sbjct 274598 GCCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTC 274539 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 || | | || ||||| |||| ||| ||||||||| | |||||||| || ||||||||| Sbjct 274538 CAGTGACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCC 274479 Query 24666 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 24709 || || ||||| | |||||| ||| | || |||||||| || || Sbjct 274478 TTCTTGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Score = 170 bits (188), Expect = 2e-37 Identities = 412/619 (67%), Gaps = 6/619 (1%) Strand=Plus/Minus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || ||||| || || |||| |||||| || | ||| | || ||||| || || Sbjct 3473491 CAAGCAAGCGAAGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGT 3473432 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCAGAAA 24249 | |||||||| || || | |||||| | ||| ||||| | | || | | | || || | Sbjct 3473431 CAACCCGGGCATCAGACCCCTCTTTTTCAACCAGAATATTG-CACAGAAGCTTCCCGAGA 3473373 Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGT--C 24307 | || || ||||| || ||||| || | || || ||| | | || | | | | Sbjct 3473372 AAAATATACCTTCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCGAA--CGACTCAGAACC 3473315 Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 24367 || ||||| | |||||| |||||||| | |||||||| | || || ||||| Sbjct 3473314 ATCGATCCAACGAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGC 3473255 Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 24427 | ||||| | | ||||| | | ||| || | || || || | | ||||||||| Sbjct 3473254 ACGGAAGAGCCTGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATA 3473195 Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487 ||| || || || ||||||||||| || || || || ||||| || | |||||| | Sbjct 3473194 CATCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGA 3473135 Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547 || ||| || || | || | | || | |||||| ||| || ||||| ||| Sbjct 3473134 AACCTGGACCTCCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGC 3473075 Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 24607 || ||||| || | | |||||| || |||| |||||||| | || || | ||| Sbjct 3473074 GGCGAAAAAAGCTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCA 3473015 Query 24608 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 24667 | | || ||||| ||| | ||| || || ||| | ||||| || || || ||||| || Sbjct 3473014 GTGAGCGAGATCTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTT 3472955 Query 24668 TTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATT 24727 || ||||| | |||||| | | | || |||||||| || || || | || || || Sbjct 3472954 CTTGTACATCTCCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTT 3472895 Query 24728 TTTTGCAAGGATTGGTTCC 24746 | ||||||| |||||| Sbjct 3472894 TGGGGCAAGGAGGGGTTCC 3472876 >seq507 Length=3453940 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 54485 TACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 54543 || || | | ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603 ||| || |||||||||||||| | || ||| || || | |||||| ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 54604 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 54484 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 54485 TACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 54543 || || | | ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 54544 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAA 54603 ||| || |||||||||||||| | || ||| || || | |||||| ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 54604 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 789399 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 789458 Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 54304 || |||| ||||| || || ||||||||||| ||||||| || || || || Sbjct 789459 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 789518 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 789519 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 789578 Query 54365 CCCTCTATACTATCATCCATCATG 54388 ||||| |||||||| ||| ||||| Sbjct 789579 CCCTCAATACTATCTTCCTTCATG 789602 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 792216 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 792157 Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 54304 || |||| ||||| || || ||||||||||| ||||||| || || || || Sbjct 792156 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 792097 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 792096 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 792037 Query 54365 CCCTCTATACTATCATCCATCATG 54388 ||||| |||||||| ||| ||||| Sbjct 792036 CCCTCAATACTATCTTCCTTCATG 792013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717755652640