Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 seq415 120 3e-22 seq255 118 9e-22 seq1 102 7e-17 >seq3 Length=5347415 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||||||||||| |||||||| || || Sbjct 3172592 CCACCGCGGAGGCGGAGGACCAAGTGGAGCGTGGACTCCTTTTGGATGTTATAATCGGCG 3172651 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || |||||||||||||| ||| Sbjct 3172652 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGTCTCTGCTGGTCTGGGGGG 3172711 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || |||||| || || | | ||| || ||| | |||| | Sbjct 3172712 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACT 3172771 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| |||| || |||||||| || ||||| Sbjct 3172772 TCAAGAGTTATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172818 Score = 123 bits (136), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| |||||| || |||| || | |||| |||||| || ||||| ||||| | Sbjct 3172362 TTCCACCTCTCAGCCTTAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAG 3172421 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | ||||||||||||| || || ||| | || | |||||||||||| | Sbjct 3172422 CCAATGTGCGCCCGTCCTCCAGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCCGGTG 3172481 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||| || || || ||||| | | ||| || | ||| |||| Sbjct 3172482 GGATGCCTTCCTTATCCTGAATTTTAGCCTTCACGTTGTCGATGGTGT--CCGAGCTCTC 3172539 Query 21127 T--TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | ||| | ||||||||||||||| |||| || |||||||| || ||||| Sbjct 3172540 TACTTCGAGGGTAATGGTCTTGCCAGTTAGAGTCTTGACAAAGATCTGCAT 3172590 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||||| || || || || || ||||| ||||| || Sbjct 3172820 CCACCACGGAGGCGGAGGACCAAGTGCAAGGTCGATTCTTTCTGGATGTTGTAGTCGGCA 3172879 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| || || ||||| ||| |||| || || ||||| ||| ||| Sbjct 3172880 AGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATCAGCCTTTGCTGATCCGGGGGA 3172939 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | ||||||||||| |||||| Sbjct 3172940 ATTCCTTCCTTGTCCTGGATCTT 3172962 >seq415 Length=3446356 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||| |||| ||||| || || || || || ||||| ||||| | Sbjct 2240986 TTCCACCACGGAGACGGAGGACCAAGTGCAAGGTTGATTCTTTCTGGATGTTGTAGTCTG 2241045 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| || | ||||| ||||| || || ||| | ||||| |||||||||||| || Sbjct 2241046 CGAGGGTGCGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGGG 2241105 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| ||||| || || | | | | ||| || | ||| Sbjct 2241106 GGATTCCTTCCTTGTCCTGAATCTTGGCCTTAACGTTGTCAATAGTGTCCGAGCTCTCAA 2241165 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||| |||||||||||||| | || |||||||| || ||||| Sbjct 2241166 CTTCAAGGGTTATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 2241214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| ||||||||||||||||| Sbjct 2240760 CCACCGCGAAGACGGAGAACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCCGCA 2240819 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTC 21061 ||||| || |||| || ||||| ||||| || | || || || |||||||| Sbjct 2240820 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATGAGCCTTTGCTGGTC 2240872 >seq255 Length=3424836 Score = 118 bits (130), Expect = 9e-22 Identities = 163/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | ||||| || |||||||| |||||||| ||||| || Sbjct 2253654 CCACCACGCAGACGGAGAACAAGATGCAGGGTTGACTCCTTCTGAATGTTGTAGTCGGCG 2253713 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || |||| ||||||||||| || || | |||||||| ||||||| | ||| Sbjct 2253714 AGGGTGCGGCCGTCTTCCAGCTGTTTTCCTGCGAAGATAAGTCTTTGCTGGT-CGGGGGG 2253772 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || |||||| || || | | ||| ||||| | ||| Sbjct 2253773 ATTCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGAGCTTTCCACC 2253832 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| ||||| | ||||| ||||| || ||||| Sbjct 2253833 TCAAGGGTGATTGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 2253879 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | |||||||||||||| || | ||| |||||| || || || ||||| | Sbjct 2252968 TTCCTCCCCTCAGCCTGAGCACCAAGTGGAGCGTGCTCTCCTTCTGGATATTGTAGTCAG 2253027 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| | | ||||||||||| || || ||| | ||||| |||||||| ||| || Sbjct 2253028 CGAGGGTGCGCCCATCCTCCAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGGG 2253087 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| ||| ||| |||||| | | ||| || || | || Sbjct 2253088 GGATTCCCTCCTTGTCCTGGATTTTTGCTTTCACATTGTCGATGGTGTCGGAGCTTTCGA 2253147 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||| || ||||| | || || ||||| || ||||| Sbjct 2253148 CCTCCAAAGTGATGGTTTTCCCGGTGAGGGTCTTCACAAAAATCTGCAT 2253196 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||||||||| || |||||||| |||||| Sbjct 2253198 CCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTATAATCCGCC 2253257 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || || ||||| || || ||| |||| || ||||||||||| ||| Sbjct 2253258 AGGGTACGACCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGG 2253317 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||| || || | | ||| || || | ||| Sbjct 2253318 ATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACC 2253377 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||||| || | || || || || || ||||| Sbjct 2253378 TCCAGAGTAATGGTCTTGCCTGTGAGGGTCTTCACGAAAATCTGCAT 2253424 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || |||||||| ||||||| ||| | | || || ||||| || || Sbjct 2253456 GTGGACTCCTTCTGGATGTTATAATCCGCCAAGGTACGACCATCTTCAAGCTGCTTTCCA 2253515 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| |||| || ||||||||||| ||| | || |||||||| ||||||| || Sbjct 2253516 GCAAAAATGAGCCTCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTG 2253575 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | |||| || | || |||||||| ||||| | ||| Sbjct 2253576 ACATTGTCGATGGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTTCCGGTGAGAGTT 2253635 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 2253636 TTCACGAAGATCTGCAT 2253652 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| |||||||| ||||| || ||||| ||||||||||||| || || Sbjct 2252773 GTGGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCGTCCTCCAGCTGCTTCCCT 2252832 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || |||||||| | | ||| | || |||||||| |||||| |||| Sbjct 2252833 GCGAAGATGAGCCTCTGCTGAT-CTGGGGGATCCCCTCCTTGTCTTGGATCTTAGCTTTC 2252891 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| |||| || || ||||| ||||| | || Sbjct 2252892 ACATTGTCGATCGTGTCGGAGCTCTCGACCTCCAGCGTGATCGTCTTCCCGGTGAGTGTC 2252951 Query 21159 TTGACAAATATTTGCATT 21176 || || || || |||||| Sbjct 2252952 TTCACGAAGATCTGCATT 2252969 >seq1 Length=8502017 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | ||| || | ||| | |||||||| || |||||||||||||| | Sbjct 7225930 TTCCACCACGGAGACGGAGGACAAGATGAAGGGTGGACTCTTTCTGAATGTTATAGTCAG 7225871 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | ||||| || |||| || ||||||||||| ||| | || ||||| ||||| || || Sbjct 7225870 CGAGGGTGCGGCCGTCTTCGAGCTGTTTGCCGGCAAAGATCAGTCTTTGCTGATCTGGGG 7225811 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || ||||| || |||||| || || | | | ||||| |||| Sbjct 7225810 GAATTCCCTCCTTATCTTGGATCTTAGCCTTGACGTTATCAATGGTATCGGAACTCTCCA 7225751 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| ||||| | ||||| || || || ||||| Sbjct 7225750 CCTCAAGGGTGATGGTCTTTCCGGTAAGGGTTTTCACGAAGATCTGCAT 7225702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/236 (69%), Gaps = 20/236 (8%) Strand=Plus/Minus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| |||||||| |||| || | ||| ||||| || ||||| ||||| || | Sbjct 7226153 CCCCTC--AGCCTGAGGACCAAGTGGAGGGTGCTTTCCTTCTGGATGTTGTAGTCAGCGA 7226096 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| || ||||||| ||||| || || ||| | || || ||||||||||| ||| | Sbjct 7226095 GGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGA 7226036 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG--- 21126 |||||||| || ||| || ||| |||| ||||| || || | Sbjct 7226035 TTCCTTCCTTATCTTGAATC------TTAGCCT---TGACATTATCAATGGTGTCTGAGC 7225985 Query 21127 TTTCCAC------GGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || |||||| |||||||| || | ||||| ||||| || |||||| Sbjct 7225984 TTTCAACCTCGAGGGTAATTGTCTTGCCCGTCAGGGTTTTCACAAAGATCTGCATT 7225929 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | |||||| | ||| | || || |||||||||||||| ||||| || Sbjct 712082 CCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGCG 712141 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || || || | || | | |||||| || || Sbjct 712142 AGCGTCCGTCCATCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAGGG 712201 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||||| | | ||| || || | |||| Sbjct 712202 ATCCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCCACC 712261 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| ||||| || |||| ||||| || || || ||||| Sbjct 712262 TCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 712308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256534224888