Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq414 116 3e-21 >seq414 Length=5667865 Score = 116 bits (128), Expect = 3e-21 Identities = 553/874 (63%), Gaps = 21/874 (2%) Strand=Plus/Minus Query 15927 TTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTC 15986 |||||||||| || ||||| ||||||| ||||| | | ||||||||||| || || | Sbjct 275317 TTGACATAACAGAAGCCTTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCC 275258 Query 15987 CTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC 16046 | | || || ||||| ||||||||||||| | ||| || | || | Sbjct 275257 CCTGCAAACTTATGAGCTCCATCCAATCAAAAGGATTATGTGAGTTGTACAACTTCTTAT 275198 Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 | ||||| | || ||| ||||||||||||| ||||| || || |||| || || Sbjct 275197 ACCCCAAGGTGACCAGCAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTG 275138 Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAA 16166 |||||||||| | | | ||| | || || | ||| | | |||| ||||| | Sbjct 275137 AGTTCATTCCCAGAAGCCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCA 275078 Query 16167 CCGCTTCA-----ATGATTAT--ATCTCTTACTACACTA--TTTAACGGAGGGTTTAATA 16217 | || || | | || | || || || ||||| ||| | | || Sbjct 275077 CTGCATCCGCCACAAGCCCATGCACCTTTT-CTTCACTAAGTTTCCC------TCGAAGC 275025 Query 16218 AGTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACT 16277 || | || | ||| ||||| ||||||||||| | ||||| || | || | | Sbjct 275024 AGACTATAGA--TTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTT 274967 Query 16278 CGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAA 16337 | || || || || | ||| ||||| | || | |||||| | ||| ||||||||| | Sbjct 274966 CATTGGAGAAGGTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGA 274907 Query 16338 ATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACG 16397 | || || || ||||| ||||| || ||||| || | | | ||| | | Sbjct 274906 AGCTTCCGGAGAAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAAG 274847 Query 16398 TTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCA 16457 | || || ||||| |||||||| || || | || ||||| | Sbjct 274846 ACTCAGA---ACCCTCGATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAA 274790 Query 16458 TGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTA 16517 | | || || ||| || | | | || |||| ||| || || || || | Sbjct 274789 CGGTTTCAATCGCACGGAAGAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCA 274730 Query 16518 TTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGC 16577 |||| ||||||||| ||||| |||||||| || ||||| ||||| ||||||||||| Sbjct 274729 AAAGTAGACTATACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACG 274670 Query 16578 ATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTA 16637 || || || || | || || || || || | || | || ||| ||| | Sbjct 274669 CCCTGGCCTCCGAAACCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGA 274610 Query 16638 TTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTG 16697 |||||||| || || || || || || | ||||| || |||| || |||| | || Sbjct 274609 TTCCATCGGATGCCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATG 274550 Query 16698 AAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAG 16757 ||| ||||| | | ||||| ||||||||| || ||||| | |||||||| | Sbjct 274549 TAAGGGAGTTCCAGTGACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGG 274490 Query 16758 AAGCAACAGCCTTTTTATACATTTTCCATATGTC 16791 |||| | ||||| || ||||| | ||| || || Sbjct 274489 AAGCCTCTGCCTTCTTGTACATCTCCCAGATTTC 274456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509005234800