Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq414 199 4e-46 seq255 95.1 1e-14 seq376 84.2 2e-11 >seq414 Length=5667865 Score = 199 bits (220), Expect = 4e-46 Identities = 403/592 (68%), Gaps = 11/592 (2%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || ||| | || || || || ||| | |||||||| |||||||| || || || Sbjct 274434 CATGTTCCCAATTCAGTACCCTGAAATCTGGGAGATGTACAAGAAGGCAGAGGCTTCCTT 274493 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 |||||| | |||||||| || | || | ||||| | | ||| | ||||| | | Sbjct 274494 TTGGACGGCGGAAGAAGTTGATTTATCACAAGATCTCCGTCACTGGAACTCCCTTACA-- 274551 Query 57665 ATCTGA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721 ||||| ||||| |||| || ||||| || | || || ||||| ||||||||||| || Sbjct 274552 -TCTGACGAGAAGCATTTCATCAAACATGTTCTAGCCTTCTTCGCGGCATCCGATGGAAT 274610 Query 57722 TGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATG 57781 ||| ||||||| ||| | ||||| | || || || || ||||||| || Sbjct 274611 CGTTCTCGAGAATCTGGCTGCCAGATTCATGAAGGAGGTCCAGGTTTCGGAGGCCAGGGC 274670 Query 57782 CTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCAT 57841 ||||| || || || | || |||||||| | || ||||| |||||| ||||| | Sbjct 274671 GTTTTATGGTTTCCAGATTGCAATTGAAAATATTCACTCAGAGATGTATAGTCTACTTTT 274730 Query 57842 CGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAAT 57901 || || ||| | ||||| || ||||| | | || ||| ||||| ||||| | Sbjct 274731 GGAAACATACATCAAGGATTCTGAAGAGAAGAGCAAGCTCTTCCGTGCGATTGAAACCGT 274790 Query 57902 GCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCAC 57961 || ||| |||||||| | ||| | | ||||| | | | | | Sbjct 274791 TCCGTGTGTCGAAAAGAAGGCGAATTGGGCCCTTCGCTGGATCGA---GGGTTCTGAGTC 274847 Query 57962 GTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT 58021 || | ||||||||| |||| || || |||||||| ||||| || || || ||||| Sbjct 274848 TTTTCCAGAGAGGCTACTCGCCTTTGCTTGTGTCGAAGGCATATTTTTCTCCGGAAGCTT 274907 Query 58022 -TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACG 58080 ||| || ||||| ||| |||| ||| | ||| ||||||| || |||| || ||| | Sbjct 274908 CTGC-GCTATATTCTGGTTGAAAAAAAGGGGCTTGATGCCTGGTTTGACCTTCTCCAATG 274966 Query 58081 AGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTA 58132 | | || ||||| || || ||||||||| |||||| || ||| |||| || Sbjct 274967 AACTCATTTCGCGTGATGAAGGTCTCCATTGTGATTTCGCTTGCTTAATCTA 275018 Score = 149 bits (164), Expect = 6e-31 Identities = 385/583 (66%), Gaps = 9/583 (2%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| || ||| | || || | || ||| | |||||||| || |||||||| || || Sbjct 3472912 CATGTTCCCAATTCAGTACCCTCAAATCTGGGAGATGTACAAGAAAGCAGAAGCCTCCTT 3472971 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 ||||| | || || || || |||||| | ||||| | ||| | || || | Sbjct 3472972 CTGGACGGCGGAGGAGGTCGATCTGTCTCAAGATCTCGCTCACTGGTACTCTCTGACG-- 3473029 Query 57665 ATCTGA-GAGAA--ATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721 ||||| || || |||| || ||||| | | || ||||||||||| ||||| || || Sbjct 3473030 -TCTGACGAAAAGCATTTCATCAAACATATTCTAGCTTTTTTCGCCGCCTCCGACGGGAT 3473088 Query 57722 TGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATG 57781 || ||| ||| | | | || || | || || || || ||||||| | Sbjct 3473089 CGTGCTCGAAAATCTCGCTGCCAGGTTCATGAAGGAGGTCCAGGTTTCGGAGGCTCGCGC 3473148 Query 57782 CTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCAT 57841 |||||||| || || | || ||||||||| | || || || |||||| || || | Sbjct 3473149 GTTTTACGGCTTCCAGATTGCAATTGAAAACATCCACTCTGAGATGTATAGTCTTCTATT 3473208 Query 57842 CGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAAT 57901 || || ||| | ||||| || || || | || || ||| || || ||||| | Sbjct 3473209 GGAAACTTACATCAAGGATTCTGAAGAAAAGAGCAGGCTCTTCCGTGCTATTGAAACCGT 3473268 Query 57902 GCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCAC 57961 || ||| |||||||| ||| | | ||||| | | | | | Sbjct 3473269 TCCTTGTGTCGAGAAGAAGGCGACTTGGGCCCTTCGTTGGATCGATGGTTCTGAGTC--- 3473325 Query 57962 GTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT 58021 |||||| ||||||||| | || || ||| ||| ||||||||||| || ||||| ||||| Sbjct 3473326 GTTCGCAGAGAGGCTACTGGCTTTTGCCTGCGTGGAAGGTATATTTTTCTCGGGAAGCTT 3473385 Query 58022 TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 |||||||| ||| |||| || | || ||||||||||| |||| || ||| || Sbjct 3473386 CTGTGCAATATTCTGGTTGAAAAAGAGGGGTCTGATGCCCGGGTTGACCTTCTCCAATGA 3473445 Query 58082 GTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGC 58124 | | || || || || |||||| | ||| ||| || || ||| Sbjct 3473446 GCTCATTTCCCGGGATGAGGGTTTACATTGTGACTTCGCTTGC 3473488 >seq255 Length=3424836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || |||||||| || || || | || || || || Sbjct 2253425 CATGCAGATTTTCGTGAAGACCCTCACAGGCAAGACCATTACTCTGGAGGTCGAGAGCTC 2253366 Query 31252 CGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| | ||||| || ||| | ||||||||| || | || || |||| Sbjct 2253365 CGACACCATCGACAATGTCAAGGCAAAGA-TCCAGGACAAGGAGGGAATCCCCCCAGACC 2253307 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | || || || ||||| || ||| | ||||| | || || ||||||| Sbjct 2253306 AGCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACCCTGGCGGATTATA 2253247 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || || |||||||| || || || Sbjct 2253246 ACATCCAGAAGGAGTCCACTCTTCACCTTGTCCT 2253213 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || || || || ||||| |||| || || ||| Sbjct 2253652 ATGCAGATCTTCGTGAAAACTCTCACCGGAAAGACCATCACTCTCGAGGTGGAGAGCTCC 2253593 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | ||||||||| || | || || ||||| Sbjct 2253592 GACACCATCGACAATGTCAAGGCAAAGA-TCCAGGACAAGGAGGGAATCCCCCCAGACCA 2253534 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || ||| | ||||| | || || |||||||| Sbjct 2253533 GCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGTCGTACCTTGGCGGATTATAA 2253474 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || ||||| || || || Sbjct 2253473 CATCCAGAAGGAGTCCACACTTCACCTTGTCCT 2253441 >seq376 Length=3218251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| | || || || |||| | ||||| || ||| | || || ||| || Sbjct 2052786 ATGCAAATCTATGTGAAAACCCTGAGGGAAAAAACAATTACCCTGGAAGTCGAAAGCTCG 2052727 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | ||||| | | || | || || |||||| ||||| | ||| | ||||| Sbjct 2052726 GATACGGTCGACAATGCGAAGCTGATGATTCAGGACAAAGAAGGAATTCCGACGGACCAA 2052667 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| || ||| |||| || | ||| || ||||| ||| Sbjct 2052666 CAGAGGCTGATCTTCGCTGGGAAGCAGCTGGAGCACGGGAGGACGTTGTCTGATTACAAC 2052607 Query 31373 ATTCAAAAAGAATCGACTCTTCATCT 31398 ||||| || |||||||||||||| || Sbjct 2052606 ATTCAGAAGGAATCGACTCTTCACCT 2052581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763513662560