Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq414 201 1e-46 seq507 116 5e-21 >seq414 Length=5667865 Score = 201 bits (222), Expect = 1e-46 Identities = 417/619 (67%), Gaps = 4/619 (1%) Strand=Plus/Minus Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635 || || || |||||||| || || ||||| || || | ||| | ||| || || || Sbjct 275015 ATTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAG 274956 Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 || | || ||||| | ||| | ||||| | ||| ||||| | ||| |||||| Sbjct 274955 GTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAG 274896 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT-- 33753 || || || ||||| || ||||||||| | || |||||| | || | | | | Sbjct 274895 AAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA--GACTCAGAAC 274838 Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813 | | ||||| | ||||||| |||||||||| ||||| || | ||||| || | Sbjct 274837 CCTCGATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCG 274778 Query 33814 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33873 || ||||| | | | || || | | ||| || | || || || | | ||||||| Sbjct 274777 CACGGAAGAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTAT 274718 Query 33874 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33933 |||| || || ||||| |||||||| || ||||| || || || || || ||||| | Sbjct 274717 ACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCG 274658 Query 33934 TAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGG 33993 || ||| || || | |||| | || | ||| || || |||||||| | Sbjct 274657 AAACCTGGACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATG 274598 Query 33994 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCC 34053 | || || || || | |||||||| || |||| || ||||| | ||| || |||| Sbjct 274597 CCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCC 274538 Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 | | | || ||||| |||| ||| ||||||||| | |||||||| || |||||||||| Sbjct 274537 AGTGACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCT 274478 Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGAT 34173 | || ||||| | |||||| ||| | || || |||||||| || || | || || | Sbjct 274477 TCTTGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCGATCAGGGT 274418 Query 34174 TTGGTGCAAGGATAGGTTC 34192 | || ||||| | ||||| Sbjct 274417 TGGGGGCAAGAAGCGGTTC 274399 Score = 199 bits (220), Expect = 5e-46 Identities = 593/908 (65%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||||| || || | ||||| ||||| || || || | ||| ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| | || || || || ||||||| | || || | |||||| || | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 |||||||| || ||||| ||||| ||| ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 | || | || || || ||| || |||||| || |||| | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGC 3473539 Query 33531 AATCTAACGGTTTCTTCACTCGG--TGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588 || ||||||||||| | | | ||| | | || | | ||| || |||| Sbjct 3473538 CCGTGCACCGTTTCTTCACTAAGCTTCACTTTAAGCA--GACTATAGAGCAAGCAAGCGA 3473481 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 | || || || | |||||| || | ||| | || || || || || | ||||||| Sbjct 3473480 AGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCA 3473421 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | || || | |||||| | ||| ||||| | | ||| ||| || || || || |||| Sbjct 3473420 TCAGACCCCTCTTTTTCAACCAGAATATTGCACAGAAGCTTCCCGAGAAAAATATACCTT 3473361 Query 33709 CTACTGCAG-CAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT--CATGTATCCACT 33765 | || |||| |||| || | || |||||| | | || | | | ||| ||||| Sbjct 3473360 CCAC-GCAGGCAAAAGCCAGTAGCCTCTCTGCGAA--CGACTCAGAACCATCGATCCAAC 3473304 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 | |||||| |||||||| | |||||||| | ||||| || ||| ||||| Sbjct 3473303 GAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAGCC 3473244 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | ||||| | | ||| || | ||||| || | | |||||||||||| || || | Sbjct 3473243 TGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGAGT 3473184 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | ||||||||||| || ||||| || ||||| || | |||||| | || ||| || | Sbjct 3473183 GGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGACCT 3473124 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 | | || | | || | |||||| ||| || || || ||| || ||||| | Sbjct 3473123 CCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAAAAG 3473064 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 34065 | | | |||||| || |||| |||||||| | || || | ||| | | || || Sbjct 3473063 CTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGAGAT 3473004 Query 34066 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 34125 ||| ||| | ||| || || ||| | ||||| || || || ||||| || || ||||| | Sbjct 3473003 CTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATCT 3472944 Query 34126 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGA 34185 |||||| | | | || || |||||||| || || | || || ||||| ||||||| Sbjct 3472943 CCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTGGGGCAAGGA 3472884 Query 34186 TAGGTTCC 34193 |||||| Sbjct 3472883 GGGGTTCC 3472876 >seq507 Length=3453940 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 63723 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63781 || || | || ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 ||| || |||||||||||||||| | ||| || || | | |||||| ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 116 bits (128), Expect = 5e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 ||||| ||||| || | || |||||||| || |||||||||| | ||| | |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 63723 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63781 || || | || ||| || || ||||| | ||| || || || || || || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 ||| || |||||||||||||||| | ||| || || | | |||||| ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813521931040