Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq414 134 1e-26 >seq414 Length=5667865 Score = 134 bits (148), Expect = 1e-26 Identities = 385/584 (66%), Gaps = 6/584 (1%) Strand=Plus/Minus Query 11624 ATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAAT 11683 ||||| || || ||||||||||| | |||||| || | || |||||||| || || Sbjct 275015 ATTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAG 274956 Query 11684 GTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAA-CCAGA 11742 || || || |||||||| || | |||||| | ||| |||||||| ||| | | || || Sbjct 274955 GTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGC-GCAGAAGCTTCCGGA 274897 Query 11743 AAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCT 11802 || ||||| || || ||| ||||| || | || || ||| | | || | Sbjct 274896 GAAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGAACC 274837 Query 11803 AGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGC 11862 ||||| |||||||| || ||||||| || || | ||||| || || Sbjct 274836 CTCGATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGC 274777 Query 11863 GTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922 || | | | || ||| | ||| | | ||||| || | | || |||||| Sbjct 274776 ACGGAAGAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATA 274717 Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGT-GCCTCTG 11981 ||| ||||| ||||||||||| || || || || || ||||| |||| | | ||||| | Sbjct 274716 CATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATA-AAACGCCCTGGCCTCCG 274658 Query 11982 AACACTGTACATCC-ACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040 || ||| || ||| ||| ||||| | || | |||||| || || ||||| Sbjct 274657 AAACCTGGACCTCCTTCAT-GAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGAT 274599 Query 12041 GATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCC 12100 | || || || ||||| | |||||| || || | || ||||| || | | | Sbjct 274598 GCCGCGAAGAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTC 274539 Query 12101 CAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGAT 12160 || | | | ||||| ||||||||| |||||||| | |||||||| ||| ||| Sbjct 274538 CAGTGACGGAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCC 274479 Query 12161 TGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAAT 12204 | || ||||| | |||||| ||| | |||| ||| ||||| || Sbjct 274478 TTCTTGTACATCTCCCAGATTTCAGGGTACTGAATTGGGAACAT 274435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468521766301920