Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq415 91.5 1e-13 seq304 86.0 6e-12 seq317 82.4 8e-11 seq255 82.4 8e-11 >seq1 Length=8502017 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || |||||||| ||||||||||| || | |||| ||||||||||||| Sbjct 7225904 TGAAGGGTGGACTCTTTCTGAATGTTATAGTCAGCGAGGGTGCGGCCGTCTTCGAGCTGT 7225845 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || ||| ||||||| | ||||||||| || || || || || || || ||| || Sbjct 7225844 TTGCCGGCAAAGATCAGTCTTTGCTGATCTGGGGGAATTCCCTCCTTATCTTGGATCTTA 7225785 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | || |||| ||||||||||| ||| | ||||| ||||| Sbjct 7225784 GCCTTGACGTTATCAATGGTATCGGAACTCTCCACCTCAAGGGTGATGGTCTTTCCGGTA 7225725 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 | ||||| ||||| || ||||| Sbjct 7225724 AGGGTTTTCACGAAGATCTGCAT 7225702 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||||||||| | ||| | || | || | |||||| || ||||||||||| || ||| Sbjct 712081 GCCGCCTCGGAGACGGAGCACAAGATGGAGCGTAGATTCCTTTTGAATGTTGTAGTCGGC 712140 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | || | || | || || ||||| || || || |||||| || ||||||||||||| Sbjct 712141 GAGCGTCCGTCCA-TCCTCAAGCTGCTTCCCGGCGAAGATCAACCGCTGCTGATCGGGAG 712199 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||| ||||| ||| | || | || | | || | ||||||| | |||| Sbjct 712200 GGATCCCTTCCTTGTC-CTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAAGACTCC 712258 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || | |||||| || || | ||||| ||||| || ||||| Sbjct 712259 ACCTCCAGCGTAATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 712308 >seq415 Length=3446356 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||| | ||||| || || |||||||| ||||| Sbjct 2240531 GCCACCACGGAGACGAAGTACCAGGTGCAGGGTAGATTCCTTCTGAATGTTGTAATCTGC 2240590 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| | ||||| ||||| ||||| ||| |||||| ||||||||||| || || Sbjct 2240591 GAGGGTGCGCCCATCTTCAAGCTGCTTACCTGCAAAGATCAACCGTTGCTGATCTGGGGG 2240650 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 ||||| || ||||| ||| |||| | || | | || | ||| || | | || | Sbjct 2240651 AATGCCCTCCTTGTC-CTGAATTTTGGCCTTGACGTTGTCTATTGTATCCGAGCTTTCAA 2240709 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||| ||||| | ||||| || || || ||||| Sbjct 2240710 CCTCCAAGGTGATTGTCTTTCCGGTGAGAGTTTTCACAAAAATCTGCAT 2240758 >seq304 Length=3547449 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||| || | || | ||| | || || || || || |||||||| ||| Sbjct 3199038 GCCACCGCGTAGGCGGAGGACCAGGTGCAGTGTGGATTCCTTCTGGATGTTATAGTCGGC 3199097 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | |||| || | ||||||||||| || || || |||||| || |||||||| |||| Sbjct 3199098 GAGAGTGCGTCCA-TCTTCGAGCTGCTTTCCGGCGAAGATCAACCGCTGCTGATCCGGAG 3199156 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||| || || ||| | || | || | | || | ||||||| || ||| Sbjct 3199157 GAATCCCTTCCTTATC-CTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAGGATTCC 3199215 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || | |||||| || || | ||||| ||||| || ||||| Sbjct 3199216 ACCTCCAGAGTAATCGTCTTCCCCGTAAGGGTTTTCACGAAGATCTGCAT 3199265 >seq317 Length=1979591 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 139567 CGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACC 139626 ||| || || || |||||||| || ||| | |||| | || || ||||| || || Sbjct 618294 CGTTGATTCCTTCTGAATGTTGTAGTCGGCGAGCGTGCGCCCATCCTCAAGCTGCTTCCC 618235 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TT 139685 || | |||| ||||||||||| ||||| || ||||| ||||| ||| | || | | Sbjct 618234 GGCGAATATCAACCGTTGCTGATCCGGAGGGATACCTTCCTTGTC-CTGAATCTTCGCCT 618176 Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | || | ||||||| || ||| ||||| | || | |||||| || || | | Sbjct 618175 TCACGTTGTCGATAGTGTCGGAGGACTCTACCTCTAGCGTAATCGTCTTCCCCGTAAGGG 618116 Query 139746 TTTTTACGAATATTTGCAT 139764 |||| ||||| || ||||| Sbjct 618115 TTTTCACGAAGATCTGCAT 618097 >seq255 Length=3424836 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||||| || ||||| || || ||||||||||| Sbjct 2253425 GCCACCACGGAGACGGAGGACAAGGTGAAGTGTGGACTCCTTCTGGATGTTATAATCCGC 2253484 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | ||||| ||||| || |||||| | || || | ||||| || || || Sbjct 2253485 CAAGGTACGACCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGG 2253544 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| ||| || | | || | ||||||| | |||||| Sbjct 2253545 GATTCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCGATGGTGTCGGAGCTCTCCAC 2253604 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||| ||||| | ||||| ||||| || ||||| Sbjct 2253605 CTCGAGAGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAGATCTGCAT 2253652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060787985600