Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq414 215 7e-51 seq507 120 4e-22 >seq414 Length=5667865 Score = 215 bits (238), Expect = 7e-51 Identities = 599/912 (66%), Gaps = 20/912 (2%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||||||||| || || | || || ||||| || || || | ||| ||| Sbjct 275300 TTTTGGTATTCACCAACTCGCCTCTCAAAGAAATTGGTCTTCCCCTGCAAACTTATGAGC 275241 Query 49729 TCCATGAAATCAAACGGATTG-GTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||| ||||||| ||||| || | || || | || ||| | ||||| | Sbjct 275240 TCCATCCAATCAAAAGGATTATGTGAG-TTGTACAACTTCTTATACCCCAAGGTGACCAG 275182 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 49847 |||| ||||||| ||||| ||||| ||| |||||| || | |||||||| | ||| Sbjct 275181 CAATTTATCCGCCACAAACTCTATGTATTGGCTCATCAACTCTGAGTTCATTCCCAGAAG 275122 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 | || | || || || ||| ||| |||||| || ||||| | | || Sbjct 275121 CCTGCAAGGTAACGCATCACAAACAAACTCTCTTTCAATATTCACTGCATCCGCCACAAG 275062 Query 49908 AGATCTAACGGTTTCTTCACTCGGTG------GATGCAATAAATGTTTAAACATCAAACA 49961 || |||||||||| || || ||| | || | || || || Sbjct 275061 CCCATGCACCTTTTCTTCACTAAGTTTCCCTCGAAGCA------GACTATAGATTAAGCA 275008 Query 49962 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCC 50021 |||||||| || || ||||| || || | ||| ||||| ||||| || || | || Sbjct 275007 AGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAGGTCAAACC 274948 Query 50022 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAAGA 50080 ||||| | ||| | ||||| | ||| ||||| | |||| | | || || || || | Sbjct 274947 AGGCATCAAGCCCCTTTTTTTCAACCAGAATATAG-CGCAGAAGCTTCCGGAGAAAAATA 274889 Query 50081 TTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGT--CATGTAT 50138 | ||||| || |||||||| | || |||||| | || | | | | | | || Sbjct 274888 TGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAA--GACTCAGAACCCTCGAT 274831 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| | ||||||| |||||||||| ||||| || | ||||| || ||| || Sbjct 274830 CCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATCGCACGGAA 274771 Query 50199 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 50258 ||| | | | || || | | ||| || | || || || | | ||||||||||| || Sbjct 274770 GAGCTTGCTCTTCTCTTCAGAATCCTTGATGTATGTTTCCAAAAGTAGACTATACATCTC 274711 Query 50259 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 50318 || ||||| |||||||| || ||||| || || || || || ||||| | || ||| Sbjct 274710 TGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAACGCCCTGGCCTCCGAAACCTG 274651 Query 50319 CACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 50378 || || | |||| |||| | ||| || || ||||| || || || || Sbjct 274650 GACCTCCTTCATGAATCTGGCAGCCAGATTCTCGAGAACGATTCCATCGGATGCCGCGAA 274591 Query 50379 AAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438 || || | |||||||| || ||||| || |||| | ||| || ||||| | | Sbjct 274590 GAAGGCTAGAACATGTTTGATGAAATGCTTCTCGTCAGATGTAAGGGAGTTCCAGTGACG 274531 Query 50439 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498 || ||||| |||| ||| ||||||||| | |||||||| || ||||||||||| || || Sbjct 274530 GAGATCTTGTGATAAATCAACTTCTTCCGCCGTCCAAAAGGAAGCCTCTGCCTTCTTGTA 274471 Query 50499 CATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGC 50558 ||| | |||||| ||| | || || |||||||| || || | || || || || || Sbjct 274470 CATCTCCCAGATTTCAGGGTACTGAATTGGGAACATGCAGAAGCGATCAGGGTTGGGGGC 274411 Query 50559 AAGGATCGGTTC 50570 ||| | |||||| Sbjct 274410 AAGAAGCGGTTC 274399 Score = 205 bits (226), Expect = 1e-47 Identities = 595/908 (66%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||||| || || | ||||| ||||| || || || | ||| ||| | Sbjct 3473778 TTTTGGTACTCACCAACTCGCCTCTCGAAGAAATTTGTCTTCCCCTGCAAGCTTATGAGT 3473719 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| | || || || || |||| || | || || | |||||| || | | Sbjct 3473718 TCCATCCAGTCGAAGGGGTTCTGTGCATTGTACAGCTTCTTGTACCCCAATGCAACCAAC 3473659 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 ||||||||||| || || ||||| ||| ||||| || |||||||||| | || Sbjct 3473658 AATCTATCCGCCACGAACTCTATGTATTGGCACATCAACTCTGAATTCATTCCCAACAGC 3473599 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | || | || || || ||| || |||||| || ||||| | | | Sbjct 3473598 CTGCACGGCAACGCATCACAAACAAACTCCCTTTCAATATCCACTGCATCCGCCACGAGC 3473539 Query 49909 GATCTAACGGTTTCTTCACTCGG--TGGATGCAATAAATGTTTAAACATCAAACATGCGA 49966 || ||||||||||| | | | || | | || | | ||| || |||| Sbjct 3473538 CCGTGCACCGTTTCTTCACTAAGCTTCACTTTAAGCA--GACTATAGAGCAAGCAAGCGA 3473481 Query 49967 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 50026 | || || || | |||||| || | ||| || || ||||| || || | ||||||| Sbjct 3473480 AGTCACAATGTAAACCCTCATCCCGGGAAATGAGCTCATTGGAGAAGGTCAACCCGGGCA 3473421 Query 50027 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAAGATTCCT 50085 | || || | |||||| | ||| ||||| | | || | | || || || || || ||| Sbjct 3473420 TCAGACCCCTCTTTTTCAACCAGAATATTG-CACAGAAGCTTCCCGAGAAAAATATACCT 3473362 Query 50086 TCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGT--CATGTATCCACT 50143 || || |||||| || | || |||||| | ||| | | | | ||| ||||| Sbjct 3473361 TCCACGCAGGCAAAAGCCAGTAGCCTCTCTGCG-AAC-GACTCAGAACCATCGATCCAAC 3473304 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | |||||| |||||||| | |||||||| | ||||| || ||| ||||| Sbjct 3473303 GAAGGGCCCAAGTCGCCTTCTTCTCGACACAAGGAACGGTTTCAATAGCACGGAAGAGCC 3473244 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | ||||| | | ||| || | ||||| || | | |||||||||||| || || | Sbjct 3473243 TGCTCTTTTCTTCAGAATCCTTGATGTAAGTTTCCAATAGAAGACTATACATCTCAGAGT 3473184 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | ||||||||||| || ||||| || ||||| || | |||||| | || ||| || | Sbjct 3473183 GGATGTTTTCAATTGCAATCTGGAAGCCGTAAAACGCGCGAGCCTCCGAAACCTGGACCT 3473124 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 | | || | |||| | |||||| ||| || ||||| ||| || ||||| | Sbjct 3473123 CCTTCATGAACCTGGCAGCGAGATTTTCGAGCACGATCCCGTCGGAGGCGGCGAAAAAAG 3473064 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT 50443 | | | |||||| || ||||| ||||||| | || || | ||| | | || || Sbjct 3473063 CTAGAATATGTTTGATGAAATGCTTTTCGTCAGACGTCAGAGAGTACCAGTGAGCGAGAT 3473004 Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 50503 ||| ||| | ||| || || ||| | ||||| || || || ||||| || || ||||| | Sbjct 3473003 CTTGAGACAGATCGACCTCCTCCGCCGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATCT 3472944 Query 50504 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGA 50563 |||||| | | | || || |||||||| || || | || || ||||| ||||||| Sbjct 3472943 CCCAGATTTGAGGGTACTGAATTGGGAACATGCAGAAGCGATCTGCGTTTGGGGCAAGGA 3472884 Query 50564 TCGGTTCC 50571 |||||| Sbjct 3472883 GGGGTTCC 3472876 >seq507 Length=3453940 Score = 120 bits (132), Expect = 4e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 ||||| ||||| || | || |||||||| || |||||||||| | ||||| |||| | Sbjct 789709 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 789768 Query 80395 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACACGCATTAA 80453 || || | || ||| ||||| ||||| | ||| || || || ||||| || | ||| | Sbjct 789769 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 789827 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 ||| || |||||||||||||| | || || || || | | ||| || ||||||| Sbjct 789828 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 789887 Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 789888 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 789935 Score = 120 bits (132), Expect = 4e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 ||||| ||||| || | || |||||||| || |||||||||| | ||||| |||| | Sbjct 791906 GTTCCAGCATTGAAAAGTGTGGGAGAAGCATGGGTAAACCATTGCTGAGACAACAGATGG 791847 Query 80395 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACACGCATTAA 80453 || || | || ||| ||||| ||||| | ||| || || || ||||| || | ||| | Sbjct 791846 TATGTATGAACAGCGGATTCAATATCATCCTTG-TGGATGCCAACCGCAACCCTCATCAG 791788 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 ||| || |||||||||||||| | || || || || | | ||| || ||||||| Sbjct 791787 CATATGTTGAGGTCTTTCAACAACCTGTCCGTTGATCTTTGAAAGGTAGGACTTTTCCAG 791728 Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 ||| || |||||||| |||| || ||| |||| ||||| || || Sbjct 791727 AGTCTTGAAACCAAAGTAGTCATACCCAAAATCTCTGTCGTATATGAT 791680 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 789399 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 789458 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 || ||||| ||||| || || ||||||||||| ||||||| || || || || Sbjct 789459 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 789518 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 789519 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 789578 Query 80275 CCCTCTATGCTATCATCAATCATG 80298 ||||| || ||||| || ||||| Sbjct 789579 CCCTCAATACTATCTTCCTTCATG 789602 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 ||||| ||||| | || | || |||| ||| ||||||| | ||| |||||||| ||| Sbjct 792216 CCTCCTTGATCCACATACCGGGCAGTGTCATTGAAAACTCTAAGCATAGGAATAATTCCA 792157 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 || ||||| ||||| || || ||||||||||| ||||||| || || || || Sbjct 792156 TTCGATGTCCCATTTGTACCACGTATATAGCTTCCTGTGGCACGGATGTTGTGGATCGAG 792097 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 ||||| || || || || ||| || | || ||| || | |||||||| ||| Sbjct 792096 AGACCGATGCCACCCGCTGATTTGCTAATCACAGCACATTCCTTCAGGGTATCATAAATG 792037 Query 80275 CCCTCTATGCTATCATCAATCATG 80298 ||||| || ||||| || ||||| Sbjct 792036 CCCTCAATACTATCTTCCTTCATG 792013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264149209520