Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Utricularia_20gibba_20[genbank_20GCA_5F002189035.1_202017-06-12] 518 sequences; 100,688,548 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq414 104 2e-17 >seq414 Length=5667865 Score = 104 bits (114), Expect = 2e-17 Identities = 234/349 (67%), Gaps = 7/349 (2%) Strand=Plus/Minus Query 13654 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13713 ||||| || || ||||||||||| || || ||||| | ||| ||||| || || || Sbjct 275015 ATTAAGCAAGCGAAATCACAATGGAGACCTTCATCACGCGAAATGAGTTCATTGGAGAAG 274956 Query 13714 GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAA 13773 || || || |||||||| || | |||||| ||||| ||||| || ||| |||||| Sbjct 274955 GTCAAACCAGGCATCAAGCCCCTTTTTTTCAACCAGAATATAGCGCAGAAGCTTCCGGAG 274896 Query 13774 AAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTG 13833 || ||||| || || || |||||| || | ||| | ||| ||| || | Sbjct 274895 AAAAATATGCCTTCGACACAAGCAAAGGCGAGTAGCCTCTCTGGAAAAGACTCAGAACCC 274836 Query 13834 TTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATT 13893 | ||||| ||||| | | || |||| | | | | ||||| || Sbjct 274835 T---CGATCCAGCGAAGGGCCCAATTCGCCTTCTTTTCGACACACGGAACGGTTTCAATC 274779 Query 13894 GCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGC 13951 ||| ||| | | |||||||| || | |||| |||||||| || | ||||| | Sbjct 274778 GCACGGAAGAGCTTGCTCTTCTCTTCAGAATCCTTG--ATGTATGTTTCCAAAAGTAGAC 274721 Query 13952 TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000 ||||||| || ||||| || ||||| || || ||||| ||||||||||| Sbjct 274720 TATACATCTCTGAGTGAATATTTTCAATTGCAATCTGGAAACCATAAAA 274672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585701137520